Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is yjbB [H]

Identifier: 21673762

GI number: 21673762

Start: 880827

End: 882503

Strand: Direct

Name: yjbB [H]

Synonym: CT0934

Alternate gene names: 21673762

Gene position: 880827-882503 (Clockwise)

Preceding gene: 21673761

Following gene: 21673763

Centisome position: 40.87

GC content: 62.02

Gene sequence:

>1677_bases
ATGATGGAATCGCAATCCGTACTATCGAATTTCCTGCTGTTCGCGGGCGGCCTCGCGGTGTTTCTGCTGGGAATGAAGTC
TCTCAGCGCCGGACTGCGGAAGGCTTCGAGCGGACGGGTCGCGCATCTGCTCTCCACAATTACCGGCAACCCGGTGTCGG
CGTTGCTGTCGGGCGTGGCGGCGACCGTGGCCGTGCAGTCGAGCAGCATGGTGATGCTGACGCTGATCGGGCTGGTGCAG
TCGCAGATTCTCACCTTTTCGCAGTCGCTTGGCGTGGTACTTGGCGCGGAGATCGGCACCACCATGATGGCGCAGCTCAT
CGCCTTTTCGCCGGGTGAGTTCGGATTGCCTCTTTTCGCCCTCGGCTTTTTCCTGTCGCTCATTCGTCGGCAGCGTGTGC
TCTCTCTTTTCGGCGAGGCGATCTCCGGTCTCGGTTTGCTCTTTTTTGGCCTCAAGCTCATGGGCATGGCGGTTGAACCG
CTGCAATCGAGCCCGCAGTTTCTCTCCATTCTGACCACGCTCGATAATCCCCTGCTTTGCGTGCTTGCCGGTGCGGTCAT
GACGGCGATTATCCAGAGCAGCGGGGCGTTCATCGCCATTCTCATCACGATGGCGCAGCAGGGTGTGCTGACCCTCGAAG
TGGCCGTGCCGCTGATGTTCGGGGCCAACATCGGCACCTGCATCACGGCGGCCATTGGCAGCGCCGGAAGCGTTCGCCCC
GCCCGGCGGGTCTTTCTTGCGCAGCTCATGTTCAACGTCACCTACGTCATCGTCTTTCTCATCTTTCTGCCGCCCTGGCT
CGACCTGATCCGCGCCATTTCGCCTTCCGATGCCGCCGGAGGGCTGGCGAGGCAGATCGCCAATGCCCACACCTTCTCCA
ACCTGTTCATGGCGTTGCTGTTTCTGCCGTTTCTGCCGCAGTTCGGGCGGATGCTTGTCAAGCTGCTGCCCGACGATCCC
GATGAGATGGGGCGGATTCCTGCGGTGTGGCATCTGCGCACCTCGGCACTCGCCACTCCCGAGGTGGCGGTTGGGCTGGC
CCGACTGGAGATTTCGCGCATGAACAAGATTCTCGGACGGATGGCAAGCGCGCTGCCCGTGCCATTCATTGGTGGCGGGA
ACGGGCGTGACCTCATCTACAAGCGGCTTGGGGTGAGCGAGGGGCTGATGATGCGCGAGGAGAAGCTCGATTTTCTGGAG
CAGAAGGTTACTGCGTACCTGATCCGCGTCATGCAGGAGGCGGTCGGCGAGCCGCTGATCCGGGAGGCCGCGGCGCTGAT
GGCGCTGGCCAAGGAGATCGAGTCGGCAGGCGATGTGGTCGAAACCCTGCTGGCCGATTTTCCGTCGGGAAAGCTCAATG
TCGGCTTGACCGCAGAGGGAAAGGCGGAGATCGAGCGGCTGCACGAACAGGTGTGCCGCGAGATCGCGGCCATGAACCTG
GCCATCGAGGAGATGAGTCCCCGCAGGGCCTCGGCGGTGATCGAAGAGGGCAAGGCGTTCGACCGCATCTTTTTCGATCT
TGGATTTTCGCACATGCGGCGCATCAAGAGCCGTTCCGAATCGGAGCGCACGCACGACCTGCATATGGAGCTGCTCCGGG
CGCTCGACGTGCTGCATCATCAGGCCATGTCGATGGCACGCACCATCGTTGGCATGACTGCCGACCGCAATGCGTGA

Upstream 100 bases:

>100_bases
CGGGCCTCGGCTTGACGAGGTGTTCGAGTACCGGCGGTGCAGGGTCGCTGAAATTCTGGGCGAGATGGCGTCTGAAACGC
GCTGAAAACAGATACGGAAG

Downstream 100 bases:

>100_bases
GTCGCTTGTAATTGCGATGGAAAATCGTAAATTCCGCCCACAAAGAAGATGTTCTTTCACATGATTAGCTGGTGCCGGTT
TTAAAGCCGGAGAATAGGGA

Product: transporter, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MMESQSVLSNFLLFAGGLAVFLLGMKSLSAGLRKASSGRVAHLLSTITGNPVSALLSGVAATVAVQSSSMVMLTLIGLVQ
SQILTFSQSLGVVLGAEIGTTMMAQLIAFSPGEFGLPLFALGFFLSLIRRQRVLSLFGEAISGLGLLFFGLKLMGMAVEP
LQSSPQFLSILTTLDNPLLCVLAGAVMTAIIQSSGAFIAILITMAQQGVLTLEVAVPLMFGANIGTCITAAIGSAGSVRP
ARRVFLAQLMFNVTYVIVFLIFLPPWLDLIRAISPSDAAGGLARQIANAHTFSNLFMALLFLPFLPQFGRMLVKLLPDDP
DEMGRIPAVWHLRTSALATPEVAVGLARLEISRMNKILGRMASALPVPFIGGGNGRDLIYKRLGVSEGLMMREEKLDFLE
QKVTAYLIRVMQEAVGEPLIREAAALMALAKEIESAGDVVETLLADFPSGKLNVGLTAEGKAEIERLHEQVCREIAAMNL
AIEEMSPRRASAVIEEGKAFDRIFFDLGFSHMRRIKSRSESERTHDLHMELLRALDVLHHQAMSMARTIVGMTADRNA

Sequences:

>Translated_558_residues
MMESQSVLSNFLLFAGGLAVFLLGMKSLSAGLRKASSGRVAHLLSTITGNPVSALLSGVAATVAVQSSSMVMLTLIGLVQ
SQILTFSQSLGVVLGAEIGTTMMAQLIAFSPGEFGLPLFALGFFLSLIRRQRVLSLFGEAISGLGLLFFGLKLMGMAVEP
LQSSPQFLSILTTLDNPLLCVLAGAVMTAIIQSSGAFIAILITMAQQGVLTLEVAVPLMFGANIGTCITAAIGSAGSVRP
ARRVFLAQLMFNVTYVIVFLIFLPPWLDLIRAISPSDAAGGLARQIANAHTFSNLFMALLFLPFLPQFGRMLVKLLPDDP
DEMGRIPAVWHLRTSALATPEVAVGLARLEISRMNKILGRMASALPVPFIGGGNGRDLIYKRLGVSEGLMMREEKLDFLE
QKVTAYLIRVMQEAVGEPLIREAAALMALAKEIESAGDVVETLLADFPSGKLNVGLTAEGKAEIERLHEQVCREIAAMNL
AIEEMSPRRASAVIEEGKAFDRIFFDLGFSHMRRIKSRSESERTHDLHMELLRALDVLHHQAMSMARTIVGMTADRNA
>Mature_558_residues
MMESQSVLSNFLLFAGGLAVFLLGMKSLSAGLRKASSGRVAHLLSTITGNPVSALLSGVAATVAVQSSSMVMLTLIGLVQ
SQILTFSQSLGVVLGAEIGTTMMAQLIAFSPGEFGLPLFALGFFLSLIRRQRVLSLFGEAISGLGLLFFGLKLMGMAVEP
LQSSPQFLSILTTLDNPLLCVLAGAVMTAIIQSSGAFIAILITMAQQGVLTLEVAVPLMFGANIGTCITAAIGSAGSVRP
ARRVFLAQLMFNVTYVIVFLIFLPPWLDLIRAISPSDAAGGLARQIANAHTFSNLFMALLFLPFLPQFGRMLVKLLPDDP
DEMGRIPAVWHLRTSALATPEVAVGLARLEISRMNKILGRMASALPVPFIGGGNGRDLIYKRLGVSEGLMMREEKLDFLE
QKVTAYLIRVMQEAVGEPLIREAAALMALAKEIESAGDVVETLLADFPSGKLNVGLTAEGKAEIERLHEQVCREIAAMNL
AIEEMSPRRASAVIEEGKAFDRIFFDLGFSHMRRIKSRSESERTHDLHMELLRALDVLHHQAMSMARTIVGMTADRNA

Specific function: Unknown

COG id: COG1283

COG function: function code P; Na+/phosphate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqeW [H]

Homologues:

Organism=Escherichia coli, GI1790451, Length=546, Percent_Identity=24.9084249084249, Blast_Score=115, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003841
- InterPro:   IPR004633 [H]

Pfam domain/function: PF02690 Na_Pi_cotrans [H]

EC number: NA

Molecular weight: Translated: 60071; Mature: 60071

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]