Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is pstS1 [H]

Identifier: 21673724

GI number: 21673724

Start: 847605

End: 848366

Strand: Direct

Name: pstS1 [H]

Synonym: CT0896

Alternate gene names: 21673724

Gene position: 847605-848366 (Clockwise)

Preceding gene: 21673723

Following gene: 21673725

Centisome position: 39.33

GC content: 58.92

Gene sequence:

>762_bases
GTGATCCGACACCGAGGGCGGTTCACCCTCCTTTTTTATTCCCTGAGGGGAAATACCCCGCTGCTTGCGGCGAGGTTCTT
TCTTTTTATCAAGAAATATGGCGTTACCGTTTCGGTCAGCGAATCGGGAAGCGGTAATGGCGCCAAGAGCCTTATCAATG
GCGAATGCGATATTGCCGATATGTCGCGCCCGATGAAGCCAATGGAAATCGAGGCGGCCCGGCGCAAGGGCGTCAATCCT
GTGCAGCACATCATCGCGCTCGATGGCATCGCGGTTGTCGTGCATCCGGCCAACCCGACGCGAGCACTGACAAAGGCGCA
GCTGGCGTCGATCTATCTTGGCCGTGTTACCAACTGGAAGCAGGTTGGCGGCCCGAACGCCCGCATCGTGGTCATTCAGC
GCGAGTCCAACAGTGGTACGCAGTCTTCATTCGAGGAGATGGCACTTGGCAAGGGGATGAGAGTTGTGCGCACCGCCGAG
ACGGCGGCCAGCAACGGCGCGGTCAAGAGCCGGGTTGCCTCAACTCCGAATGCGATTGGGTTCGTTGGCCTCGGGTATGT
GGATCGTTCCGTCAAGCCGCTGAAGATCGATGGCGTCTTGCCGAACGTGGCCGCCGTGAAGAGCCGCGCCTATCCTCTGG
CCCGCCCGCTGTTCATGTACTCCAAGGGAGCCGCGACTGGCATGGTTGCTAGGTTCCTGGCCCTGCCGTCCACTCCCGAT
GGCCGGAAAATCATCAGTGAGCTTGGCTTTGTAAACAAATAA

Upstream 100 bases:

>100_bases
CTCCGGATGGCAAGCGCATGATTAGCGAGCTTGGTTTCGTTAACAAGTAAGTTGCCTGTTTTTCCCGTCAGGTAGTGACG
GTTCGCAACAGTACAGGAGG

Downstream 100 bases:

>100_bases
TCTATGCCCGGCCGGTATTGTTGCAAATATGTAACAATACCGGCTTTTTTTCTTGTGCGGCAGAAGATACCTTTGACTCG
TCAAGAATGCTCGATCAGAC

Product: phosphate ABC transporter, periplasmic phosphate-binding protein, putative

Products: NA

Alternate protein names: PBP 1 [H]

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MIRHRGRFTLLFYSLRGNTPLLAARFFLFIKKYGVTVSVSESGSGNGAKSLINGECDIADMSRPMKPMEIEAARRKGVNP
VQHIIALDGIAVVVHPANPTRALTKAQLASIYLGRVTNWKQVGGPNARIVVIQRESNSGTQSSFEEMALGKGMRVVRTAE
TAASNGAVKSRVASTPNAIGFVGLGYVDRSVKPLKIDGVLPNVAAVKSRAYPLARPLFMYSKGAATGMVARFLALPSTPD
GRKIISELGFVNK

Sequences:

>Translated_253_residues
MIRHRGRFTLLFYSLRGNTPLLAARFFLFIKKYGVTVSVSESGSGNGAKSLINGECDIADMSRPMKPMEIEAARRKGVNP
VQHIIALDGIAVVVHPANPTRALTKAQLASIYLGRVTNWKQVGGPNARIVVIQRESNSGTQSSFEEMALGKGMRVVRTAE
TAASNGAVKSRVASTPNAIGFVGLGYVDRSVKPLKIDGVLPNVAAVKSRAYPLARPLFMYSKGAATGMVARFLALPSTPD
GRKIISELGFVNK
>Mature_253_residues
MIRHRGRFTLLFYSLRGNTPLLAARFFLFIKKYGVTVSVSESGSGNGAKSLINGECDIADMSRPMKPMEIEAARRKGVNP
VQHIIALDGIAVVVHPANPTRALTKAQLASIYLGRVTNWKQVGGPNARIVVIQRESNSGTQSSFEEMALGKGMRVVRTAE
TAASNGAVKSRVASTPNAIGFVGLGYVDRSVKPLKIDGVLPNVAAVKSRAYPLARPLFMYSKGAATGMVARFLALPSTPD
GRKIISELGFVNK

Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011862
- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 27142; Mature: 27142

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRHRGRFTLLFYSLRGNTPLLAARFFLFIKKYGVTVSVSESGSGNGAKSLINGECDIAD
CCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHCCCCCCHHH
MSRPMKPMEIEAARRKGVNPVQHIIALDGIAVVVHPANPTRALTKAQLASIYLGRVTNWK
CCCCCCCCCHHHHHHCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHH
QVGGPNARIVVIQRESNSGTQSSFEEMALGKGMRVVRTAETAASNGAVKSRVASTPNAIG
HCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHCCCCCEE
FVGLGYVDRSVKPLKIDGVLPNVAAVKSRAYPLARPLFMYSKGAATGMVARFLALPSTPD
EEEECCCCCCCCCEEECCCCCCHHHHHHCCCCCCCHHHEECCCCHHHHHHHHHHCCCCCC
GRKIISELGFVNK
HHHHHHHCCCCCC
>Mature Secondary Structure
MIRHRGRFTLLFYSLRGNTPLLAARFFLFIKKYGVTVSVSESGSGNGAKSLINGECDIAD
CCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHCCCCCCHHH
MSRPMKPMEIEAARRKGVNPVQHIIALDGIAVVVHPANPTRALTKAQLASIYLGRVTNWK
CCCCCCCCCHHHHHHCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHH
QVGGPNARIVVIQRESNSGTQSSFEEMALGKGMRVVRTAETAASNGAVKSRVASTPNAIG
HCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHCCCCCEE
FVGLGYVDRSVKPLKIDGVLPNVAAVKSRAYPLARPLFMYSKGAATGMVARFLALPSTPD
EEEECCCCCCCCCEEECCCCCCHHHHHHCCCCCCCHHHEECCCCHHHHHHHHHHCCCCCC
GRKIISELGFVNK
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12354221 [H]