| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is pstC [H]
Identifier: 21673725
GI number: 21673725
Start: 848370
End: 849710
Strand: Direct
Name: pstC [H]
Synonym: CT0897
Alternate gene names: 21673725
Gene position: 848370-849710 (Clockwise)
Preceding gene: 21673724
Following gene: 21673726
Centisome position: 39.37
GC content: 58.69
Gene sequence:
>1341_bases ATGCCCGGCCGGTATTGTTGCAAATATGTAACAATACCGGCTTTTTTTCTTGTGCGGCAGAAGATACCTTTGACTCGTCA AGAATGCTCGATCAGACACCGTGAGCGGGCTGCCACGCATGACCGAAAACATGTTGTATCGGTGAAGCGTGTTTCCAAAA TTAACCGTGCCGTTATGAGTGCAGAGGTAGTGAGGGGAAGCGCGCATCGCAGCGGCGACTTTGTCGTCAGCGCCAGCAAG CGCAAAATGCAGAAAGTGGCGAAAGTTGGCGGGGAGGGGGTACTGCTTGTCCTGGCCTCATTCGTGGCGATTGTCGTGCT CTTCATCTTTTATTTCGTCGCCTCCGACGCTATTCCCTATTTCAAGCTCCGTGGTTTCAGCGAATTCTTTACCAGCACCA GCTGGTATCCGGCAAACGATCCGCCGCAGTTTGGCGCGCTGGCCATCATTTATGGCAGCGTTATGGTCACACTCGGTTCG ACCCTTCTGGCCGTGCCGATGGGCGTGGCGGCGGCGATCTGCCTGAGTGACATTCTCCCGTTTTCGGTTCGTCAGTACGC CAAGCCGGTTATCGAAATGCTTTCGGCCATCCCTTCGGTTGCCTACGGTTTCTTTGCTCTCGTCATTCTCGCCCCGCTGC TTCAGGCAAATGGCGGGCCGATACTGATGTGGGCCTGGCTACTTCTCGCTTCTCCGTTTTTGCTTCTCGCCGTCATCGTG GCCGCCGATCTTCTGAGCGCGAAAATCGATAACGACAAACAGCGGCATCTGGTCTCCAAAGTGCTCTACGTCGTCATGGG CGGCGCGTCGATGCTGCTGCTGTACGTCGTGGCGGGTACGCTTGACCGTATGGAGATCCTCACCGGCACCAACGCCCTGA ACGTGTCGATCATTCTGAGCTTCATGGCCCTTCCGACCATTGTCAGCGTCTCCGAAGATTCGCTCCAGGCTGTTGGCCGC GATCTCCGCGAGGGGAGCTACGCGCTTGGCGCGACCCGGGCCGAGACCATCGTCAAAACCGTGCTGCCCGCAGCCAGCAG TGGCATTCTGGCCGCCGTCATTCTCGGCGTGATGCGCGCCCTGGGCGAGACGATGGTGGTCTGGATGGCTTCGGGCAACT CCTCGAACATGCCGTCCCCCTGGTACAACTATCTCGCGCCGATCCGCACGCTTACGGCCACGATCGCCGGTGACATGGGC GAGGCCGACCAGGTCACCGGTTCGGCCCGCTACCACGTGCTTTTTGCGATGGGTTTGCTGCTGCTGGTTGTCAGCTTCGT CAGCAACCTCATCAGCGAACGAATCGTCGCGCGACAGCGCAGGGTGCTCGCGGGGCAGTGA
Upstream 100 bases:
>100_bases GGGAGCCGCGACTGGCATGGTTGCTAGGTTCCTGGCCCTGCCGTCCACTCCCGATGGCCGGAAAATCATCAGTGAGCTTG GCTTTGTAAACAAATAATCT
Downstream 100 bases:
>100_bases GCCTCACGAGCCGACGTTGCCGGTATCGATAACTGTTATTTATTTTGTCAATCAAATAGCGACTCATGAACCTCGGAACA CGAAAAATACTGGACCGTTC
Product: phosphate ABC transporter, permease protein, putative
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MPGRYCCKYVTIPAFFLVRQKIPLTRQECSIRHRERAATHDRKHVVSVKRVSKINRAVMSAEVVRGSAHRSGDFVVSASK RKMQKVAKVGGEGVLLVLASFVAIVVLFIFYFVASDAIPYFKLRGFSEFFTSTSWYPANDPPQFGALAIIYGSVMVTLGS TLLAVPMGVAAAICLSDILPFSVRQYAKPVIEMLSAIPSVAYGFFALVILAPLLQANGGPILMWAWLLLASPFLLLAVIV AADLLSAKIDNDKQRHLVSKVLYVVMGGASMLLLYVVAGTLDRMEILTGTNALNVSIILSFMALPTIVSVSEDSLQAVGR DLREGSYALGATRAETIVKTVLPAASSGILAAVILGVMRALGETMVVWMASGNSSNMPSPWYNYLAPIRTLTATIAGDMG EADQVTGSARYHVLFAMGLLLLVVSFVSNLISERIVARQRRVLAGQ
Sequences:
>Translated_446_residues MPGRYCCKYVTIPAFFLVRQKIPLTRQECSIRHRERAATHDRKHVVSVKRVSKINRAVMSAEVVRGSAHRSGDFVVSASK RKMQKVAKVGGEGVLLVLASFVAIVVLFIFYFVASDAIPYFKLRGFSEFFTSTSWYPANDPPQFGALAIIYGSVMVTLGS TLLAVPMGVAAAICLSDILPFSVRQYAKPVIEMLSAIPSVAYGFFALVILAPLLQANGGPILMWAWLLLASPFLLLAVIV AADLLSAKIDNDKQRHLVSKVLYVVMGGASMLLLYVVAGTLDRMEILTGTNALNVSIILSFMALPTIVSVSEDSLQAVGR DLREGSYALGATRAETIVKTVLPAASSGILAAVILGVMRALGETMVVWMASGNSSNMPSPWYNYLAPIRTLTATIAGDMG EADQVTGSARYHVLFAMGLLLLVVSFVSNLISERIVARQRRVLAGQ >Mature_445_residues PGRYCCKYVTIPAFFLVRQKIPLTRQECSIRHRERAATHDRKHVVSVKRVSKINRAVMSAEVVRGSAHRSGDFVVSASKR KMQKVAKVGGEGVLLVLASFVAIVVLFIFYFVASDAIPYFKLRGFSEFFTSTSWYPANDPPQFGALAIIYGSVMVTLGST LLAVPMGVAAAICLSDILPFSVRQYAKPVIEMLSAIPSVAYGFFALVILAPLLQANGGPILMWAWLLLASPFLLLAVIVA ADLLSAKIDNDKQRHLVSKVLYVVMGGASMLLLYVVAGTLDRMEILTGTNALNVSIILSFMALPTIVSVSEDSLQAVGRD LREGSYALGATRAETIVKTVLPAASSGILAAVILGVMRALGETMVVWMASGNSSNMPSPWYNYLAPIRTLTATIAGDMGE ADQVTGSARYHVLFAMGLLLLVVSFVSNLISERIVARQRRVLAGQ
Specific function: Part of a binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=315, Percent_Identity=25.7142857142857, Blast_Score=93, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 48167; Mature: 48035
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGRYCCKYVTIPAFFLVRQKIPLTRQECSIRHRERAATHDRKHVVSVKRVSKINRAVMS CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEVVRGSAHRSGDFVVSASKRKMQKVAKVGGEGVLLVLASFVAIVVLFIFYFVASDAIPY HHHHHCCCCCCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH FKLRGFSEFFTSTSWYPANDPPQFGALAIIYGSVMVTLGSTLLAVPMGVAAAICLSDILP HHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FSVRQYAKPVIEMLSAIPSVAYGFFALVILAPLLQANGGPILMWAWLLLASPFLLLAVIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH AADLLSAKIDNDKQRHLVSKVLYVVMGGASMLLLYVVAGTLDRMEILTGTNALNVSIILS HHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHH FMALPTIVSVSEDSLQAVGRDLREGSYALGATRAETIVKTVLPAASSGILAAVILGVMRA HHHHHHHHHCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LGETMVVWMASGNSSNMPSPWYNYLAPIRTLTATIAGDMGEADQVTGSARYHVLFAMGLL HCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHH LLVVSFVSNLISERIVARQRRVLAGQ HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PGRYCCKYVTIPAFFLVRQKIPLTRQECSIRHRERAATHDRKHVVSVKRVSKINRAVMS CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEVVRGSAHRSGDFVVSASKRKMQKVAKVGGEGVLLVLASFVAIVVLFIFYFVASDAIPY HHHHHCCCCCCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH FKLRGFSEFFTSTSWYPANDPPQFGALAIIYGSVMVTLGSTLLAVPMGVAAAICLSDILP HHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FSVRQYAKPVIEMLSAIPSVAYGFFALVILAPLLQANGGPILMWAWLLLASPFLLLAVIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH AADLLSAKIDNDKQRHLVSKVLYVVMGGASMLLLYVVAGTLDRMEILTGTNALNVSIILS HHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHH FMALPTIVSVSEDSLQAVGRDLREGSYALGATRAETIVKTVLPAASSGILAAVILGVMRA HHHHHHHHHCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LGETMVVWMASGNSSNMPSPWYNYLAPIRTLTATIAGDMGEADQVTGSARYHVLFAMGLL HCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHH LLVVSFVSNLISERIVARQRRVLAGQ HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]