| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is pstS1 [H]
Identifier: 21673723
GI number: 21673723
Start: 846742
End: 847554
Strand: Direct
Name: pstS1 [H]
Synonym: CT0895
Alternate gene names: 21673723
Gene position: 846742-847554 (Clockwise)
Preceding gene: 21673722
Following gene: 21673724
Centisome position: 39.29
GC content: 57.69
Gene sequence:
>813_bases ATGAACCTGTTTAAGAAAATCATTTTTGGTGCCGCCGTTATGGGCCTCATGGCTGCCGGTGATGCTTCGGCTGCCGGTAA AATCGTCATCGATGGTTCGACCACCGTCGGCCCGATCGCCAAGGCTTTTGCCGCCTACTTCCACAAGAAGACCGGTATCG ATGTTACCGTCAGCGAGTCCGGTTCCGGCAACGGCGCCAAGAGCCTTATCAACAAAACCTGCGACATCGCCGATATGTCT CGCCCGATGGAGCCGAAAGAAATCGCAGCCGCCAAGGCTAATGGCGTCAACCCTGTCGAGCACGTCGTCGCTCTCGACGG TCTCTCCATGATCGTGCATCCCTCCAACCCGGTTGCGAAACTGACCACCGCTCAGATTCACGACATCTACCTCGGCAAGA TCACCAACTGGAAGCAGGTTGGCGGCCCGAACGCTCAGATCGTATTCGTTCAGCGCGAGTCCAACAGCGGCACCCAGGAG TGCTTCGAGAAGCTCGTCATGAAGGACGACAAGATCGCTCCCGCCGCCGAGACGGCGGCCAGCAACGGCGCGGTCAAGAG CCGGGTTGCCTCGACTCCGAATGCGATCGGCTTCGTAGGCCTCGGTTTTGTTGACAAGAGCGTCAAGCCGCTGATCGTCA ACGGCGTCAAGCCGAGCATCGCTACCGTCAGGAATGGTTCCTACGTGCTGCATCGCCCGCTCTTCATGTACACCAACGGA CAGCCGAAGGGTGACGTCGCCAAGTTCATCAATCTGCCGAAGACTCCGGATGGCAAGCGCATGATTAGCGAGCTTGGTTT CGTTAACAAGTAA
Upstream 100 bases:
>100_bases ATAAAGTCCGCCGTAGATTGAGTCCGTATTCAAGAGGGTCTCGGCCAAGTGTTGTTTCAAAACCATTCAATCAAAAAAAT CAAAAAAGGAAGAATTCATT
Downstream 100 bases:
>100_bases GTTGCCTGTTTTTCCCGTCAGGTAGTGACGGTTCGCAACAGTACAGGAGGGTGATCCGACACCGAGGGCGGTTCACCCTC CTTTTTTATTCCCTGAGGGG
Product: phosphate ABC transporter, periplasmic phosphate-binding protein, putative
Products: NA
Alternate protein names: PBP 1 [H]
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MNLFKKIIFGAAVMGLMAAGDASAAGKIVIDGSTTVGPIAKAFAAYFHKKTGIDVTVSESGSGNGAKSLINKTCDIADMS RPMEPKEIAAAKANGVNPVEHVVALDGLSMIVHPSNPVAKLTTAQIHDIYLGKITNWKQVGGPNAQIVFVQRESNSGTQE CFEKLVMKDDKIAPAAETAASNGAVKSRVASTPNAIGFVGLGFVDKSVKPLIVNGVKPSIATVRNGSYVLHRPLFMYTNG QPKGDVAKFINLPKTPDGKRMISELGFVNK
Sequences:
>Translated_270_residues MNLFKKIIFGAAVMGLMAAGDASAAGKIVIDGSTTVGPIAKAFAAYFHKKTGIDVTVSESGSGNGAKSLINKTCDIADMS RPMEPKEIAAAKANGVNPVEHVVALDGLSMIVHPSNPVAKLTTAQIHDIYLGKITNWKQVGGPNAQIVFVQRESNSGTQE CFEKLVMKDDKIAPAAETAASNGAVKSRVASTPNAIGFVGLGFVDKSVKPLIVNGVKPSIATVRNGSYVLHRPLFMYTNG QPKGDVAKFINLPKTPDGKRMISELGFVNK >Mature_270_residues MNLFKKIIFGAAVMGLMAAGDASAAGKIVIDGSTTVGPIAKAFAAYFHKKTGIDVTVSESGSGNGAKSLINKTCDIADMS RPMEPKEIAAAKANGVNPVEHVVALDGLSMIVHPSNPVAKLTTAQIHDIYLGKITNWKQVGGPNAQIVFVQRESNSGTQE CFEKLVMKDDKIAPAAETAASNGAVKSRVASTPNAIGFVGLGFVDKSVKPLIVNGVKPSIATVRNGSYVLHRPLFMYTNG QPKGDVAKFINLPKTPDGKRMISELGFVNK
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 28379; Mature: 28379
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLFKKIIFGAAVMGLMAAGDASAAGKIVIDGSTTVGPIAKAFAAYFHKKTGIDVTVSES CCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECC GSGNGAKSLINKTCDIADMSRPMEPKEIAAAKANGVNPVEHVVALDGLSMIVHPSNPVAK CCCCHHHHHHHHCCCHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCHH LTTAQIHDIYLGKITNWKQVGGPNAQIVFVQRESNSGTQECFEKLVMKDDKIAPAAETAA EEHHHHHEEEECCCCCHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHC SNGAVKSRVASTPNAIGFVGLGFVDKSVKPLIVNGVKPSIATVRNGSYVLHRPLFMYTNG CCCHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEECCCEEEECCEEEEECC QPKGDVAKFINLPKTPDGKRMISELGFVNK CCCHHHHHHHCCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure MNLFKKIIFGAAVMGLMAAGDASAAGKIVIDGSTTVGPIAKAFAAYFHKKTGIDVTVSES CCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECC GSGNGAKSLINKTCDIADMSRPMEPKEIAAAKANGVNPVEHVVALDGLSMIVHPSNPVAK CCCCHHHHHHHHCCCHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCHH LTTAQIHDIYLGKITNWKQVGGPNAQIVFVQRESNSGTQECFEKLVMKDDKIAPAAETAA EEHHHHHEEEECCCCCHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHC SNGAVKSRVASTPNAIGFVGLGFVDKSVKPLIVNGVKPSIATVRNGSYVLHRPLFMYTNG CCCHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEECCCEEEECCEEEEECC QPKGDVAKFINLPKTPDGKRMISELGFVNK CCCHHHHHHHCCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12354221 [H]