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The map label for this gene is pdaD [H]

Identifier: 21673397

GI number: 21673397

Start: 569869

End: 570414

Strand: Reverse

Name: pdaD [H]

Synonym: CT0562

Alternate gene names: 21673397

Gene position: 570414-569869 (Counterclockwise)

Preceding gene: 21673398

Following gene: 21673396

Centisome position: 26.47

GC content: 55.68

Gene sequence:

>546_bases
TTGTCATTCGTCCCAACAAAAGTATTCTTCACCAAAGGTGTCGGAAGACACAAAGAGTATCTCTCTTCGTTCGAGCTTGC
CCTGCGCGACGCCAAGATCGAAAAGTGCAATCTGGTGACGGTTTCAAGTATCTTTCCTCCAAAATGCGAACGCATCAGCG
TCGAAGAGGGACTGAAGCACCTCAAGCCGGGACAGATCACCTTCGCGGTCATGGCGCGTAACTCGACCAACGAGAACAAC
CGCCTCATCTCCGCTTCGGTTGGCGTGGCGCTTCCGGCTGACGAAAGCCAATACGGCTATCTCTCCGAGCATCATCCGTA
TGGCGAAACTGCCGAGCAGTCGGGCGAATACGCCGAAGATCTGGCCGCGACGATGCTAGCCACCACGCTCGGCATCGAAT
TTGATCCCAACAAGGACTGGGACGAGCGCGAGGGCATCTACAAGATGAGCGGCAAGATCGTCAACTCCTTCAACATCACC
GAGTCTGCCGAGGGCGAAACCGGCATGTGGACGACCGTGATCTCCTGCGCAGTGCTGCTGCCATAA

Upstream 100 bases:

>100_bases
CAAGGTGGCGCGCGCAAAAAAATCGTTTTGAATGCGTTTGCTTTTTCCTATAATTGCACCAACTGACGCCTTTCTCTAAC
CTCTATCCGGAGCTACCACC

Downstream 100 bases:

>100_bases
GGACGACGGAACGGCGAGACATTCGTATCGATACCGGGAATCAGTCGCGTGACCGATTCCCGGTTCTTTTTTTTCTGGCA
AAACGCAACAGAAACAAGGC

Product: pyruvoyl-dependent arginine decarboxylase

Products: NA

Alternate protein names: PvlArgDC [H]

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSFVPTKVFFTKGVGRHKEYLSSFELALRDAKIEKCNLVTVSSIFPPKCERISVEEGLKHLKPGQITFAVMARNSTNENN
RLISASVGVALPADESQYGYLSEHHPYGETAEQSGEYAEDLAATMLATTLGIEFDPNKDWDEREGIYKMSGKIVNSFNIT
ESAEGETGMWTTVISCAVLLP

Sequences:

>Translated_181_residues
MSFVPTKVFFTKGVGRHKEYLSSFELALRDAKIEKCNLVTVSSIFPPKCERISVEEGLKHLKPGQITFAVMARNSTNENN
RLISASVGVALPADESQYGYLSEHHPYGETAEQSGEYAEDLAATMLATTLGIEFDPNKDWDEREGIYKMSGKIVNSFNIT
ESAEGETGMWTTVISCAVLLP
>Mature_180_residues
SFVPTKVFFTKGVGRHKEYLSSFELALRDAKIEKCNLVTVSSIFPPKCERISVEEGLKHLKPGQITFAVMARNSTNENNR
LISASVGVALPADESQYGYLSEHHPYGETAEQSGEYAEDLAATMLATTLGIEFDPNKDWDEREGIYKMSGKIVNSFNITE
SAEGETGMWTTVISCAVLLP

Specific function: Unknown

COG id: COG1945

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pdaD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016104
- InterPro:   IPR016105
- InterPro:   IPR002724
- ProDom:   PD010449 [H]

Pfam domain/function: PF01862 PvlArgDC [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 19976; Mature: 19845

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFVPTKVFFTKGVGRHKEYLSSFELALRDAKIEKCNLVTVSSIFPPKCERISVEEGLKH
CCCCCCHHEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEECHHHHHHH
LKPGQITFAVMARNSTNENNRLISASVGVALPADESQYGYLSEHHPYGETAEQSGEYAED
CCCCCEEEEEEEECCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCHHHCCHHHHH
LAATMLATTLGIEFDPNKDWDEREGIYKMSGKIVNSFNITESAEGETGMWTTVISCAVLL
HHHHHHHHHHCCEECCCCCCHHHCCEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCC
P
C
>Mature Secondary Structure 
SFVPTKVFFTKGVGRHKEYLSSFELALRDAKIEKCNLVTVSSIFPPKCERISVEEGLKH
CCCCCHHEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEECHHHHHHH
LKPGQITFAVMARNSTNENNRLISASVGVALPADESQYGYLSEHHPYGETAEQSGEYAED
CCCCCEEEEEEEECCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCHHHCCHHHHH
LAATMLATTLGIEFDPNKDWDEREGIYKMSGKIVNSFNITESAEGETGMWTTVISCAVLL
HHHHHHHHHHCCEECCCCCCHHHCCEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA