Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21673385

Identifier: 21673385

GI number: 21673385

Start: 558644

End: 558937

Strand: Reverse

Name: 21673385

Synonym: CT0550

Alternate gene names: NA

Gene position: 558937-558644 (Counterclockwise)

Preceding gene: 21673390

Following gene: 21673383

Centisome position: 25.94

GC content: 46.26

Gene sequence:

>294_bases
ATGTTACCGCCTACCATCAATTGGAAGCTAAAACCGGAAATTTCCATCAAAAAATTCTCTGTTTTCAAAAAAAAAGCCTG
CCCACGCCAAAACCGCCAGAGAAATCTGCCTGAAAAGAGAATGACTGCACGCCCCAACCCCGAAATACCGATTATTCTGA
TGACCGGCTTTGGCAAGGACATCGATAATGCGAGCAGCGTGAACAAGCTCGGCATCTGCAAAATGCTGAAAAAACCGGTC
AGACTTGCCGACCTGGTTTCGATGATCAACGAAATACTCACCAGAACCGGATGA

Upstream 100 bases:

>100_bases
TGCCGACCAGAAGCGCCGTGAACTTGCTCTTGTCGTTCATCAGCAGCTTCAGCGCCACCCTGTAAATTCCTGAAACAGGC
TTCATTACGTTCATTCGATC

Downstream 100 bases:

>100_bases
AAATCAACCAACAACAAACGGCAAGCCATACCCGGCTCGGGCTCGACCATTTTTTTTACAAAAAGATTAAAAAAATCTGC
TGAATTTCCATTTTTTGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MLPPTINWKLKPEISIKKFSVFKKKACPRQNRQRNLPEKRMTARPNPEIPIILMTGFGKDIDNASSVNKLGICKMLKKPV
RLADLVSMINEILTRTG

Sequences:

>Translated_97_residues
MLPPTINWKLKPEISIKKFSVFKKKACPRQNRQRNLPEKRMTARPNPEIPIILMTGFGKDIDNASSVNKLGICKMLKKPV
RLADLVSMINEILTRTG
>Mature_97_residues
MLPPTINWKLKPEISIKKFSVFKKKACPRQNRQRNLPEKRMTARPNPEIPIILMTGFGKDIDNASSVNKLGICKMLKKPV
RLADLVSMINEILTRTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11059; Mature: 11059

Theoretical pI: Translated: 11.26; Mature: 11.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPPTINWKLKPEISIKKFSVFKKKACPRQNRQRNLPEKRMTARPNPEIPIILMTGFGKD
CCCCCCCEEECCCCCHHHHHHHHHHCCCCCCHHCCCCHHHHCCCCCCCCCEEEECCCCCC
IDNASSVNKLGICKMLKKPVRLADLVSMINEILTRTG
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLPPTINWKLKPEISIKKFSVFKKKACPRQNRQRNLPEKRMTARPNPEIPIILMTGFGKD
CCCCCCCEEECCCCCHHHHHHHHHHCCCCCCHHCCCCHHHHCCCCCCCCCEEEECCCCCC
IDNASSVNKLGICKMLKKPVRLADLVSMINEILTRTG
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA