| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is hisH
Identifier: 21673311
GI number: 21673311
Start: 491866
End: 492471
Strand: Direct
Name: hisH
Synonym: CT0476
Alternate gene names: 21673311
Gene position: 491866-492471 (Clockwise)
Preceding gene: 21673304
Following gene: 21673312
Centisome position: 22.82
GC content: 51.65
Gene sequence:
>606_bases ATGGTATTTATTGCCGACTATGGCGCCGGAAACCTCAGGTCGGTGCACAAGGCTTTCGATTATCTCGGTATCGAGGCAGT CGTCAGCGACAAGGCATCCGAGATGAGCCGTTACGATAAAGTGCTTATTCCCGGTGTCGGCGCGTTTGGCCCGGCGATGG AAGCGCTGAACCGCCAGGGATTCGACGAGGCGATCCGGGAGCATATCGACAAAGGCCGCAGTGTGCTCGGTATCTGCCTT GGCATGCAGCTCTTTCTTTCAGAAAGCGAGGAGATGGGAGCGTATAAGGGCCTTGACATCGTGCCTGGCAAGGTGCTCCG TTTTACCAGCAGTACCGACAAGATTCCGCAGATTGGCTGGAACTCTGTTGATTATTGCAAGGACTCGGTCCTTTTCCGCA ATGTTCCAGATCAGTCGTATTTCTACTTCGTGCACTCTTACTATTGTGCTCCCGACGAGCCGGAAAGCGTGGCCGCGACC ACCTTTTTCGCCGGGAAAAAATTTTGTTCGGCCATTGAGAAAAATGGTATTTTCGCGGTACAGTTTCACCCTGAAAAAAG CTCCGAAGCAGGTTTGCAGGTGCTGAAAAATTTTGCAGAATTTTAA
Upstream 100 bases:
>100_bases GAGAACTTCTTAAAAAAAAGACGTGTTGCCCCTTTTTCGAGGTTTGAACCGCTTTTTTCTCCATCCGGAGGCCATCAGCA ACGTTTTAATCTTTAAGTTC
Downstream 100 bases:
>100_bases GTCCTTGAGGTTATAAACGTTATGCTGATTATACCGGCTATAGATATTAAAGAAGGAAAGTGCGTCAGGCTGACCCGCGG GGACTTCGCTCAGAAGAAAA
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MVFIADYGAGNLRSVHKAFDYLGIEAVVSDKASEMSRYDKVLIPGVGAFGPAMEALNRQGFDEAIREHIDKGRSVLGICL GMQLFLSESEEMGAYKGLDIVPGKVLRFTSSTDKIPQIGWNSVDYCKDSVLFRNVPDQSYFYFVHSYYCAPDEPESVAAT TFFAGKKFCSAIEKNGIFAVQFHPEKSSEAGLQVLKNFAEF
Sequences:
>Translated_201_residues MVFIADYGAGNLRSVHKAFDYLGIEAVVSDKASEMSRYDKVLIPGVGAFGPAMEALNRQGFDEAIREHIDKGRSVLGICL GMQLFLSESEEMGAYKGLDIVPGKVLRFTSSTDKIPQIGWNSVDYCKDSVLFRNVPDQSYFYFVHSYYCAPDEPESVAAT TFFAGKKFCSAIEKNGIFAVQFHPEKSSEAGLQVLKNFAEF >Mature_201_residues MVFIADYGAGNLRSVHKAFDYLGIEAVVSDKASEMSRYDKVLIPGVGAFGPAMEALNRQGFDEAIREHIDKGRSVLGICL GMQLFLSESEEMGAYKGLDIVPGKVLRFTSSTDKIPQIGWNSVDYCKDSVLFRNVPDQSYFYFVHSYYCAPDEPESVAAT TFFAGKKFCSAIEKNGIFAVQFHPEKSSEAGLQVLKNFAEF
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Escherichia coli, GI1788334, Length=200, Percent_Identity=38, Blast_Score=126, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6319725, Length=208, Percent_Identity=35.0961538461538, Blast_Score=131, Evalue=7e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS5_CHLTE (Q8KF56)
Other databases:
- EMBL: AE006470 - RefSeq: NP_661376.1 - ProteinModelPortal: Q8KF56 - SMR: Q8KF56 - GeneID: 1008215 - GenomeReviews: AE006470_GR - KEGG: cte:CT0476 - NMPDR: fig|194439.1.peg.470 - TIGR: CT0476 - HOGENOM: HBG292341 - OMA: WNEINIV - ProtClustDB: PRK13181 - BioCyc: CTEP194439:CT_0476-MONOMER - GO: GO:0005737 - HAMAP: MF_00278 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 - PIRSF: PIRSF000495 - TIGRFAMs: TIGR01855
Pfam domain/function: PF00117 GATase
EC number: 2.4.2.-
Molecular weight: Translated: 22259; Mature: 22259
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 79-79 ACT_SITE 183-183 ACT_SITE 185-185
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFIADYGAGNLRSVHKAFDYLGIEAVVSDKASEMSRYDKVLIPGVGAFGPAMEALNRQG CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHCCCC FDEAIREHIDKGRSVLGICLGMQLFLSESEEMGAYKGLDIVPGKVLRFTSSTDKIPQIGW HHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCC NSVDYCKDSVLFRNVPDQSYFYFVHSYYCAPDEPESVAATTFFAGKKFCSAIEKNGIFAV CCHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEE QFHPEKSSEAGLQVLKNFAEF EECCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MVFIADYGAGNLRSVHKAFDYLGIEAVVSDKASEMSRYDKVLIPGVGAFGPAMEALNRQG CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHCCCC FDEAIREHIDKGRSVLGICLGMQLFLSESEEMGAYKGLDIVPGKVLRFTSSTDKIPQIGW HHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCC NSVDYCKDSVLFRNVPDQSYFYFVHSYYCAPDEPESVAATTFFAGKKFCSAIEKNGIFAV CCHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEE QFHPEKSSEAGLQVLKNFAEF EECCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901