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The map label for this gene is 21673304

Identifier: 21673304

GI number: 21673304

Start: 485850

End: 486812

Strand: Direct

Name: 21673304

Synonym: CT0468

Alternate gene names: NA

Gene position: 485850-486812 (Clockwise)

Preceding gene: 21673303

Following gene: 21673311

Centisome position: 22.55

GC content: 54.83

Gene sequence:

>963_bases
TTGTCAGGGCGGTTTGCGAACCGCCCTTTTGGTTGTAGGCAAAACGGCATTGAATCAATGGACAATCTCATTCTTATTGC
AGTATCGTTTACTGCGGGGTTGCTGATGCGCCGGTTCAGTCGGATGCCGGAGCAGACTCCGGTTGCCCTGAATATGTTCA
TCATTTACGTTTCATTACCGGCTATGGTGCTGAATTATCTTCATGGCCTCGATTTCAGACCATCGATGTTCCTGCCCGCT
TCGATGCCGTGGCTTACCTTCGGTGTATCGGCGCTGTTTTTCGTTGTCGCAGGCAAGCTTCTGAAGCTTCCAAGAGCGAC
GGTCGGCTCGCTGATTCTTTGCGGTGGGCTGGGCAATACCTCGTTTTTCGGTTTTCCGATGATCGAGGCGTTTTACGGAA
AGCAAGGGATCGTGCACGGCATCATCATCGACCAGCTCGGCAGCTTTATGGTAGTTTCGATTCTCGGCGTCACCGTGGCC
GGTATCTATTCACACGGAAGCACTGATGTTCGCAGCATTGTCAAGCGGGTGCTGCTGTTTCCCTCGTTTATCGCCCTGAT
TGCGGCCGTGCTGCTCAATGATGTGATATACTCCGCATCGTTTGCGAATCTGGTCAAACGGCTGAGCGACATGCTTGCGC
CGCTGGCGCTCTTTTCGGTAGGCTTTCAGTTCAATCCGGGCCATATCGGTAAAAGCCGGAACACGCTTGCGCTAGGGCTT
GCGTTCAAACTCGCCGTGGTACCTGCGGTGATGTTCGTGATCTATGTGATGGTTGCAGGGATGCAGGGGCTACCCGCGCG
CATCACCATTTTCGAGGCGGCCATGCCGACCATGATCACCGGCGGTATCATCGCCGCCGAACACCAGCTCGACCCGCCGC
TGGCCAACCTCATGGTGTCTTTTGGCCTGCTGGTTTCGTTTGTGACGCTTGCTTTGTGGACGGTAGTGCTGCGCGGGGTT
TGA

Upstream 100 bases:

>100_bases
CTGTACCGGCAGAGTAGTCGTCGCTTTCCGTGATTCCCGGAATGGGACGGATGGGACTTCTGAAATGGCAGAGATGAAGA
CGATTCTACAGGTTTTTTAG

Downstream 100 bases:

>100_bases
GGCGAGGAGCGCAGTTTCCGGTTTGGGGACTTATGAGCCCTGTAACCTCAGCGGGAGTTCGAGGCCGTTCGCTTCGAGCA
GCTCGCGGTTTGAGAGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSGRFANRPFGCRQNGIESMDNLILIAVSFTAGLLMRRFSRMPEQTPVALNMFIIYVSLPAMVLNYLHGLDFRPSMFLPA
SMPWLTFGVSALFFVVAGKLLKLPRATVGSLILCGGLGNTSFFGFPMIEAFYGKQGIVHGIIIDQLGSFMVVSILGVTVA
GIYSHGSTDVRSIVKRVLLFPSFIALIAAVLLNDVIYSASFANLVKRLSDMLAPLALFSVGFQFNPGHIGKSRNTLALGL
AFKLAVVPAVMFVIYVMVAGMQGLPARITIFEAAMPTMITGGIIAAEHQLDPPLANLMVSFGLLVSFVTLALWTVVLRGV

Sequences:

>Translated_320_residues
MSGRFANRPFGCRQNGIESMDNLILIAVSFTAGLLMRRFSRMPEQTPVALNMFIIYVSLPAMVLNYLHGLDFRPSMFLPA
SMPWLTFGVSALFFVVAGKLLKLPRATVGSLILCGGLGNTSFFGFPMIEAFYGKQGIVHGIIIDQLGSFMVVSILGVTVA
GIYSHGSTDVRSIVKRVLLFPSFIALIAAVLLNDVIYSASFANLVKRLSDMLAPLALFSVGFQFNPGHIGKSRNTLALGL
AFKLAVVPAVMFVIYVMVAGMQGLPARITIFEAAMPTMITGGIIAAEHQLDPPLANLMVSFGLLVSFVTLALWTVVLRGV
>Mature_319_residues
SGRFANRPFGCRQNGIESMDNLILIAVSFTAGLLMRRFSRMPEQTPVALNMFIIYVSLPAMVLNYLHGLDFRPSMFLPAS
MPWLTFGVSALFFVVAGKLLKLPRATVGSLILCGGLGNTSFFGFPMIEAFYGKQGIVHGIIIDQLGSFMVVSILGVTVAG
IYSHGSTDVRSIVKRVLLFPSFIALIAAVLLNDVIYSASFANLVKRLSDMLAPLALFSVGFQFNPGHIGKSRNTLALGLA
FKLAVVPAVMFVIYVMVAGMQGLPARITIFEAAMPTMITGGIIAAEHQLDPPLANLMVSFGLLVSFVTLALWTVVLRGV

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 34515; Mature: 34384

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRFANRPFGCRQNGIESMDNLILIAVSFTAGLLMRRFSRMPEQTPVALNMFIIYVSLP
CCCCCCCCCCCCCHHHHHHHHHHEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
AMVLNYLHGLDFRPSMFLPASMPWLTFGVSALFFVVAGKLLKLPRATVGSLILCGGLGNT
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCCC
SFFGFPMIEAFYGKQGIVHGIIIDQLGSFMVVSILGVTVAGIYSHGSTDVRSIVKRVLLF
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
PSFIALIAAVLLNDVIYSASFANLVKRLSDMLAPLALFSVGFQFNPGHIGKSRNTLALGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
AFKLAVVPAVMFVIYVMVAGMQGLPARITIFEAAMPTMITGGIIAAEHQLDPPLANLMVS
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCEEEECCCCCCHHHHHHHH
FGLLVSFVTLALWTVVLRGV
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGRFANRPFGCRQNGIESMDNLILIAVSFTAGLLMRRFSRMPEQTPVALNMFIIYVSLP
CCCCCCCCCCCCHHHHHHHHHHEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
AMVLNYLHGLDFRPSMFLPASMPWLTFGVSALFFVVAGKLLKLPRATVGSLILCGGLGNT
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCCC
SFFGFPMIEAFYGKQGIVHGIIIDQLGSFMVVSILGVTVAGIYSHGSTDVRSIVKRVLLF
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
PSFIALIAAVLLNDVIYSASFANLVKRLSDMLAPLALFSVGFQFNPGHIGKSRNTLALGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
AFKLAVVPAVMFVIYVMVAGMQGLPARITIFEAAMPTMITGGIIAAEHQLDPPLANLMVS
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCEEEECCCCCCHHHHHHHH
FGLLVSFVTLALWTVVLRGV
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]