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The map label for this gene is ygcF [C]

Identifier: 21673157

GI number: 21673157

Start: 334193

End: 334855

Strand: Reverse

Name: ygcF [C]

Synonym: CT0318

Alternate gene names: 21673157

Gene position: 334855-334193 (Counterclockwise)

Preceding gene: 21673158

Following gene: 21673156

Centisome position: 15.54

GC content: 60.33

Gene sequence:

>663_bases
ATGAGCACGGAAGCCCCCCTCAATATCAGCGAGATTTTTTACTCAATCCAGGGTGAGTCTTCGTTTGCAGGCTGGCCTTG
CGCCTTCGTGCGCCTCGCCGGATGCGGCCACGGTTGCCGTTACTGCGACACAACCTACGCTGAGGAGCCGGGCACTGCGA
TGACTATTGACGAGATCATGCACCGCGTACTCGCGTTTGATGCGCCGTGCGTCGAGGTCACGGGCGGCGAGCCGCTGCTT
CAATCTGGGACATTCGGGCTGCTTTCAGCGCTCTGCGACCGGCATCCAGTGGTGTTGCTCGAAACAGGCGGCTTCCTGCC
GGTGGATCGCGTTGACCCGCGTGTGCACGCGATCATCGACATCAAGGCGCCGTCGTCGGGAGTCATGGAGCATAATTGCG
CCGCCAATTTCACACTCGCCCTCAACGAGCCGGAACGCTTCGAATTCAAGATCGTCGTCGCCTCGGAGGCGGATTACCTG
TGGGCAAAATCGTATATCGCCGGACACGGCATCCTCGGCAAATGTTCGATCATCTTCGGCCCGGTGTTCGGCCAGCTCGA
ACCGCGCCTCCTCGCCGAATGGATGCTACGCGACCGCCTCCCGGTACGGATGCAGCTCCAGCTGCACAAGTACATCTGGA
ACCCAGACGCCAGAGGTGTATAA

Upstream 100 bases:

>100_bases
TGCTGCCAGGCGACACGCCAAAAACACTCGCCGAGCGGGTGCTCCGGTGCGAGCATCGCCTCTACCCCGCCGCGCTCGAA
AAACTGCTTGACAAGCAGCC

Downstream 100 bases:

>100_bases
ATGACGAGCCTCTCCATCATCGTGCCGCTCTACAACGAGCGGGAATCGCTTCCCGAATTCTGCGAAAGCCTGTTCGCAGC
GCTGAAAAGCTCCGAGCTGA

Product: radical activating enzyme, putative

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Radical Activating; Radical SAM Family Protein; Organic Radical Activating; Organic Radical Activating Protein; Radical SAM-Superfamily Protein; Radical Sam Domain Protein; 7-Cyano-7-Deazaguanosine Biosynthesis Protein QueE; Radical Activating ; Radical SAM Protein; MoaA Family Fe-S Oxidoreductase; NrdG Protein; Organic-Radical-Activating; Queuosine Biosynthesis Protein QueE; Radical Activating Family Protein; Organic Radical Activating Protein; Radical SAM Superfamily Protein; Co PQQ Synthesis Protein; Fe-S Oxidoreductase; Co PQQ Synthesis Protein III; Queuosine Biosynthesis Protein; Co PQQ Synthesis Protein Conjectural; 6- Pyruvoyltetrahydropterin 2-Reductase; Radical-Activating Radical SAM Superfamily; Organic Radical Activating Protein NrdG; Radical SAM; Radical SAM Family Fe-S Protein

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSTEAPLNISEIFYSIQGESSFAGWPCAFVRLAGCGHGCRYCDTTYAEEPGTAMTIDEIMHRVLAFDAPCVEVTGGEPLL
QSGTFGLLSALCDRHPVVLLETGGFLPVDRVDPRVHAIIDIKAPSSGVMEHNCAANFTLALNEPERFEFKIVVASEADYL
WAKSYIAGHGILGKCSIIFGPVFGQLEPRLLAEWMLRDRLPVRMQLQLHKYIWNPDARGV

Sequences:

>Translated_220_residues
MSTEAPLNISEIFYSIQGESSFAGWPCAFVRLAGCGHGCRYCDTTYAEEPGTAMTIDEIMHRVLAFDAPCVEVTGGEPLL
QSGTFGLLSALCDRHPVVLLETGGFLPVDRVDPRVHAIIDIKAPSSGVMEHNCAANFTLALNEPERFEFKIVVASEADYL
WAKSYIAGHGILGKCSIIFGPVFGQLEPRLLAEWMLRDRLPVRMQLQLHKYIWNPDARGV
>Mature_219_residues
STEAPLNISEIFYSIQGESSFAGWPCAFVRLAGCGHGCRYCDTTYAEEPGTAMTIDEIMHRVLAFDAPCVEVTGGEPLLQ
SGTFGLLSALCDRHPVVLLETGGFLPVDRVDPRVHAIIDIKAPSSGVMEHNCAANFTLALNEPERFEFKIVVASEADYLW
AKSYIAGHGILGKCSIIFGPVFGQLEPRLLAEWMLRDRLPVRMQLQLHKYIWNPDARGV

Specific function: Unknown

COG id: COG0602

COG function: function code O; Organic radical activating enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24257; Mature: 24126

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEAPLNISEIFYSIQGESSFAGWPCAFVRLAGCGHGCRYCDTTYAEEPGTAMTIDEIM
CCCCCCCCHHHHEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEHHHHH
HRVLAFDAPCVEVTGGEPLLQSGTFGLLSALCDRHPVVLLETGGFLPVDRVDPRVHAIID
HHHHHCCCCEEEECCCCCCHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEE
IKAPSSGVMEHNCAANFTLALNEPERFEFKIVVASEADYLWAKSYIAGHGILGKCSIIFG
EECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHCCCCCEEEEEEEEE
PVFGQLEPRLLAEWMLRDRLPVRMQLQLHKYIWNPDARGV
CCCCCCCHHHHHHHHHHCCCCEEEEEEEEHHEECCCCCCC
>Mature Secondary Structure 
STEAPLNISEIFYSIQGESSFAGWPCAFVRLAGCGHGCRYCDTTYAEEPGTAMTIDEIM
CCCCCCCHHHHEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEHHHHH
HRVLAFDAPCVEVTGGEPLLQSGTFGLLSALCDRHPVVLLETGGFLPVDRVDPRVHAIID
HHHHHCCCCEEEECCCCCCHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEE
IKAPSSGVMEHNCAANFTLALNEPERFEFKIVVASEADYLWAKSYIAGHGILGKCSIIFG
EECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHCCCCCEEEEEEEEE
PVFGQLEPRLLAEWMLRDRLPVRMQLQLHKYIWNPDARGV
CCCCCCCHHHHHHHHHHCCCCEEEEEEEEHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA