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The map label for this gene is arnC [H]

Identifier: 21673156

GI number: 21673156

Start: 333206

End: 334192

Strand: Reverse

Name: arnC [H]

Synonym: CT0317

Alternate gene names: 21673156

Gene position: 334192-333206 (Counterclockwise)

Preceding gene: 21673157

Following gene: 21673155

Centisome position: 15.51

GC content: 57.24

Gene sequence:

>987_bases
ATGACGAGCCTCTCCATCATCGTGCCGCTCTACAACGAGCGGGAATCGCTTCCCGAATTCTGCGAAAGCCTGTTCGCAGC
GCTGAAAAGCTCCGAGCTGAAGCGATGTTTCGGAGACGAATTCAGTTTCGAGATCATCATGGTCGATGACGGTTCGACCG
ATGGCTCCGACAAGGTGATCGGTGAATTGATGACTGACAGGCCGGAGCTGCGACTGATCTCGTTCCGGCGGAATTATGGC
AAGACCGAGGCACTCTCGGCAGGATTTCGAGCGGCGTCGGGTGAGGTGGTCGTCACCATCGACGCCGACATGCAGGACGA
TCCGCGCGAGATCGCCGGCCTTGTTCTGAAAATAAACGAAGGATTCGACCTGGTGAGCGGATGGAAGCGGGAACGGAACG
ATCCGATGAGTAAAACCGTGCCTTCGAAGCTTTTCAACCTGACGACGCGCCTCTTCAGCGGCATCCCGCTGCACGACTTC
AACTGCGGCCTGAAAGCCTACAGCCGCGAACTCGTCGCTTCGCTCGACCTGCACGGCGAAATGCACCGCTACATTCCGGT
GCTGGCAAAGTGGAAAGGATTCCGCGTCACTGAAATTCCCGTCATGCACCACGCGCGCAAGTTCGGCAAGAGCAAGTTTG
GGGCATCGCGATTCCTGCCGGGTCTGTTCGATTTCCTTTCGGTGATGTTCATCACCCGCTACCTCAAACGCCCGATGCAC
TTTTTCGGCATGATGAGCCTCGGCAGCTTCTTCTTTGGCTTCTGCATCAGCCTTTACGTTACCATCGAAAAGTACCTGTT
CGACAAACCGGCAGGCAACCGGCCGATTCTGTTCCTCGGCATCCTGCTCATCATCCTCGGCGTGCAGTTCTTCTCGACCG
GCCTGCTCGGCGAACTGCTTTCAACCCGGCCATCGCGCAACGGCGGGTGGTCGATCCGCAAAACCGCAAACCTGCCGGAC
GAGATCATCGACAGGCTAACCGATTGA

Upstream 100 bases:

>100_bases
GCGCCTCCTCGCCGAATGGATGCTACGCGACCGCCTCCCGGTACGGATGCAGCTCCAGCTGCACAAGTACATCTGGAACC
CAGACGCCAGAGGTGTATAA

Downstream 100 bases:

>100_bases
ACCTTCAACGGCAGATCGTCGTTAAGCTCTGATCAACACACGAAAACCTGCAAACAACACGATAGTATGAAACGGGTCGG
CGCCCATGTCAGTATTGCCG

Product: glycosyl transferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTSLSIIVPLYNERESLPEFCESLFAALKSSELKRCFGDEFSFEIIMVDDGSTDGSDKVIGELMTDRPELRLISFRRNYG
KTEALSAGFRAASGEVVVTIDADMQDDPREIAGLVLKINEGFDLVSGWKRERNDPMSKTVPSKLFNLTTRLFSGIPLHDF
NCGLKAYSRELVASLDLHGEMHRYIPVLAKWKGFRVTEIPVMHHARKFGKSKFGASRFLPGLFDFLSVMFITRYLKRPMH
FFGMMSLGSFFFGFCISLYVTIEKYLFDKPAGNRPILFLGILLIILGVQFFSTGLLGELLSTRPSRNGGWSIRKTANLPD
EIIDRLTD

Sequences:

>Translated_328_residues
MTSLSIIVPLYNERESLPEFCESLFAALKSSELKRCFGDEFSFEIIMVDDGSTDGSDKVIGELMTDRPELRLISFRRNYG
KTEALSAGFRAASGEVVVTIDADMQDDPREIAGLVLKINEGFDLVSGWKRERNDPMSKTVPSKLFNLTTRLFSGIPLHDF
NCGLKAYSRELVASLDLHGEMHRYIPVLAKWKGFRVTEIPVMHHARKFGKSKFGASRFLPGLFDFLSVMFITRYLKRPMH
FFGMMSLGSFFFGFCISLYVTIEKYLFDKPAGNRPILFLGILLIILGVQFFSTGLLGELLSTRPSRNGGWSIRKTANLPD
EIIDRLTD
>Mature_327_residues
TSLSIIVPLYNERESLPEFCESLFAALKSSELKRCFGDEFSFEIIMVDDGSTDGSDKVIGELMTDRPELRLISFRRNYGK
TEALSAGFRAASGEVVVTIDADMQDDPREIAGLVLKINEGFDLVSGWKRERNDPMSKTVPSKLFNLTTRLFSGIPLHDFN
CGLKAYSRELVASLDLHGEMHRYIPVLAKWKGFRVTEIPVMHHARKFGKSKFGASRFLPGLFDFLSVMFITRYLKRPMHF
FGMMSLGSFFFGFCISLYVTIEKYLFDKPAGNRPILFLGILLIILGVQFFSTGLLGELLSTRPSRNGGWSIRKTANLPDE
IIDRLTD

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=242, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=4e-15,
Organism=Escherichia coli, GI1788588, Length=299, Percent_Identity=32.1070234113712, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1788692, Length=328, Percent_Identity=25.609756097561, Blast_Score=108, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI71999402, Length=229, Percent_Identity=27.5109170305677, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI25146207, Length=192, Percent_Identity=27.6041666666667, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24585265, Length=228, Percent_Identity=25.8771929824561, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 37091; Mature: 36959

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLSIIVPLYNERESLPEFCESLFAALKSSELKRCFGDEFSFEIIMVDDGSTDGSDKVI
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHH
GELMTDRPELRLISFRRNYGKTEALSAGFRAASGEVVVTIDADMQDDPREIAGLVLKINE
HHHHCCCCCCEEEHHHHCCCCHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCEEEEEECC
GFDLVSGWKRERNDPMSKTVPSKLFNLTTRLFSGIPLHDFNCGLKAYSRELVASLDLHGE
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCH
MHRYIPVLAKWKGFRVTEIPVMHHARKFGKSKFGASRFLPGLFDFLSVMFITRYLKRPMH
HHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHH
FFGMMSLGSFFFGFCISLYVTIEKYLFDKPAGNRPILFLGILLIILGVQFFSTGLLGELL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
STRPSRNGGWSIRKTANLPDEIIDRLTD
HCCCCCCCCEEEEECCCCCHHHHHHHCC
>Mature Secondary Structure 
TSLSIIVPLYNERESLPEFCESLFAALKSSELKRCFGDEFSFEIIMVDDGSTDGSDKVI
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHH
GELMTDRPELRLISFRRNYGKTEALSAGFRAASGEVVVTIDADMQDDPREIAGLVLKINE
HHHHCCCCCCEEEHHHHCCCCHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCEEEEEECC
GFDLVSGWKRERNDPMSKTVPSKLFNLTTRLFSGIPLHDFNCGLKAYSRELVASLDLHGE
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCH
MHRYIPVLAKWKGFRVTEIPVMHHARKFGKSKFGASRFLPGLFDFLSVMFITRYLKRPMH
HHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHH
FFGMMSLGSFFFGFCISLYVTIEKYLFDKPAGNRPILFLGILLIILGVQFFSTGLLGELL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
STRPSRNGGWSIRKTANLPDEIIDRLTD
HCCCCCCCCEEEEECCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA