| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is cdsA [H]
Identifier: 21673072
GI number: 21673072
Start: 246276
End: 247097
Strand: Direct
Name: cdsA [H]
Synonym: CT0233
Alternate gene names: 21673072
Gene position: 246276-247097 (Clockwise)
Preceding gene: 21673071
Following gene: 21673074
Centisome position: 11.43
GC content: 59.61
Gene sequence:
>822_bases GTGTTGATGCAAAGCAATCTCATGCAGAGAGTGGCGGTTGCCATTGTGGGCATTCCGCTGTTACTCTGGCTCAATATGCA AGGTGGTTTGTATTTTCTGGGGCTGGTGCTCGCGCTCAGCCTCATGGCGACCTGGGAGTTCTGGCGCCTGGCCACGCATC GGGCACATCCGCCGTCGGTTGTTATTCTGCTGCCGCTGACTGCCTTTGTGCAGCTCGATTTCTATTACGGCTTCATCGGC TACTGGGAGGCGATTCTCGCCGTGGTCATGCTTCTGTATGTGCTTGAAATATGGCGGAACCAGGGTTCCCAGTTCATGAA CCTCGGTGCGACGCTTGTCGGTCTGCTCTACGTGAACCTAAGCTTTGGTGCGTTGCTCAGGCTCCGCTTGTCGGAGACCA CCGGCGAGGGTTCCGGCGAGGCGCTGGTGCTGCTCATGTTGCTGTGTGTCTGGGCGGCGGATATTTTCGCCTATTTCGGC GGACGCGGATTCGGAGGCAAGTTTATCAAAAAGAGGCTCTTTGCGCGCATCAGCCCGAAGAAGACCTGGGAGGGCTATCT TGCTGGAATTGCCGGAAGCGCGCTGGCGGCGTGGGCCTGCTCGGCGTACATCTCCGGCTGCCCCGACGGGCGGGCGATAC CGGCGGGCCTGCTCATCGGCGTGGTCGCGCCCGCAGGCGACCTGCTCGAATCGATGTTCAAGCGTGATGCGGGAGTCAAG GACTCATCGGGTGTCATTCCGGGGCACGGCGGTGTGCTTGACCGCTTTGATACCGTGATGTTCGTCTCCCCGCTGCTCTA TTTCCTCGTGCATCACTGGTGA
Upstream 100 bases:
>100_bases CGTTGTCTCTTTTTTTTCTGCTGATCCGGTATTTTCCGGTGAGGCCGGCATTGCAGGATGCCGATAACCCGATGCCTCCC GGGCATCGCTGGAAATCTCA
Downstream 100 bases:
>100_bases TCTTTCACCGGTTGATGCCGGTACATAAAAGAATGTTTTTCTTATATTCCGGTTTTGTTTTTAGAGGAACTCCTCTGTTG ACGGTATCGTGATCTTCGGT
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLMQSNLMQRVAVAIVGIPLLLWLNMQGGLYFLGLVLALSLMATWEFWRLATHRAHPPSVVILLPLTAFVQLDFYYGFIG YWEAILAVVMLLYVLEIWRNQGSQFMNLGATLVGLLYVNLSFGALLRLRLSETTGEGSGEALVLLMLLCVWAADIFAYFG GRGFGGKFIKKRLFARISPKKTWEGYLAGIAGSALAAWACSAYISGCPDGRAIPAGLLIGVVAPAGDLLESMFKRDAGVK DSSGVIPGHGGVLDRFDTVMFVSPLLYFLVHHW
Sequences:
>Translated_273_residues MLMQSNLMQRVAVAIVGIPLLLWLNMQGGLYFLGLVLALSLMATWEFWRLATHRAHPPSVVILLPLTAFVQLDFYYGFIG YWEAILAVVMLLYVLEIWRNQGSQFMNLGATLVGLLYVNLSFGALLRLRLSETTGEGSGEALVLLMLLCVWAADIFAYFG GRGFGGKFIKKRLFARISPKKTWEGYLAGIAGSALAAWACSAYISGCPDGRAIPAGLLIGVVAPAGDLLESMFKRDAGVK DSSGVIPGHGGVLDRFDTVMFVSPLLYFLVHHW >Mature_273_residues MLMQSNLMQRVAVAIVGIPLLLWLNMQGGLYFLGLVLALSLMATWEFWRLATHRAHPPSVVILLPLTAFVQLDFYYGFIG YWEAILAVVMLLYVLEIWRNQGSQFMNLGATLVGLLYVNLSFGALLRLRLSETTGEGSGEALVLLMLLCVWAADIFAYFG GRGFGGKFIKKRLFARISPKKTWEGYLAGIAGSALAAWACSAYISGCPDGRAIPAGLLIGVVAPAGDLLESMFKRDAGVK DSSGVIPGHGGVLDRFDTVMFVSPLLYFLVHHW
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=196, Percent_Identity=36.2244897959184, Blast_Score=100, Evalue=8e-23, Organism=Escherichia coli, GI1787677, Length=121, Percent_Identity=34.7107438016529, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 29868; Mature: 29868
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMQSNLMQRVAVAIVGIPLLLWLNMQGGLYFLGLVLALSLMATWEFWRLATHRAHPPSV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE VILLPLTAFVQLDFYYGFIGYWEAILAVVMLLYVLEIWRNQGSQFMNLGATLVGLLYVNL EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SFGALLRLRLSETTGEGSGEALVLLMLLCVWAADIFAYFGGRGFGGKFIKKRLFARISPK HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC KTWEGYLAGIAGSALAAWACSAYISGCPDGRAIPAGLLIGVVAPAGDLLESMFKRDAGVK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCC DSSGVIPGHGGVLDRFDTVMFVSPLLYFLVHHW CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLMQSNLMQRVAVAIVGIPLLLWLNMQGGLYFLGLVLALSLMATWEFWRLATHRAHPPSV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE VILLPLTAFVQLDFYYGFIGYWEAILAVVMLLYVLEIWRNQGSQFMNLGATLVGLLYVNL EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SFGALLRLRLSETTGEGSGEALVLLMLLCVWAADIFAYFGGRGFGGKFIKKRLFARISPK HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC KTWEGYLAGIAGSALAAWACSAYISGCPDGRAIPAGLLIGVVAPAGDLLESMFKRDAGVK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCC DSSGVIPGHGGVLDRFDTVMFVSPLLYFLVHHW CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]