| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673071
Identifier: 21673071
GI number: 21673071
Start: 245314
End: 246282
Strand: Direct
Name: 21673071
Synonym: CT0232
Alternate gene names: NA
Gene position: 245314-246282 (Clockwise)
Preceding gene: 21673068
Following gene: 21673072
Centisome position: 11.38
GC content: 55.01
Gene sequence:
>969_bases ATGAATTTCCCTGACGATCCGAAGCCGCACCGGCGGCCCCGTTTTTTCGATACCGTTTTGGTTTTGCTTTTCGTATTGGC CGCCTATCCGATTGTTGGCGCGCTTCTGACCATACTGGTGGCGGGGGGTAATCCTTTCGGCAATGGATTCGAAGCGGCAA CCCATTCGTTCGTGGTGCGTCTTCTCGTAGCTCAGGCATTCGGGCAGATGGTGGTGCTTGCGCTTCCGGTGTTCTGGCTT GCAAGGCGCTTTTCCGGCGACGGATTGTTCGGCAATACAACGCTTGAGTGGCTGGGGATCAGAAAGCACGGCGGCAGCCG ACCTGCGTTGATAGCCGGGGCCGGAATGCTGCTGTTGCAACCCGCGCTGTACAGCATTGTCGAGTTGCAGACGCTTCTGC TGCCTTATCTTGGCACTTTTGGGAAGTCGCTTCTGCAGGAGCAGGCCACGCTTGACATTTTTCTCAAAAAACTTGCCGGA GGTGCGTCGATCGGGGGGAGCGTCCTGTCGATTCTTGTGCTTGTCCTGACTCCGGCGATCTGCGAAGAGCTGTTTTTTCG CGGGTACATCCAGAAAAGTTTTGTCCTGAGCCTTTCCCCGCAAAGGGCGGTGCTTTTTACAGGGATTGTGTTTGCCCTGT TTCACATGGAGTGGTTCAATTTCGTGCCGCTGACTTTGCTCGGGTGGTATATTGGGTATATTTACTGGAAATCTGATAAT CTCCTGGTTCCCGCCGTCGCGCACGGCACCAACAATCTGGCCGCGCTCGTTCTGCTAAAAAGCGGCATCGATTCAGGCAG CGCAACTGATCCGTCTTCCGGATTGCTTGTTTCCTGGCCGTGGTGGGGTCTTGTGGTGGTTTCGTTGTCTCTTTTTTTTC TGCTGATCCGGTATTTTCCGGTGAGGCCGGCATTGCAGGATGCCGATAACCCGATGCCTCCCGGGCATCGCTGGAAATCT CAGTGTTGA
Upstream 100 bases:
>100_bases AAAACGAACGCTGTTTTTGCCCATTGTCTGCTCTGTCGAAAATAGGGTATCTTTCTGCCTGCAATGATACAATCATTTTT CAACCGATGAACCGTGCTTC
Downstream 100 bases:
>100_bases TGCAAAGCAATCTCATGCAGAGAGTGGCGGTTGCCATTGTGGGCATTCCGCTGTTACTCTGGCTCAATATGCAAGGTGGT TTGTATTTTCTGGGGCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MNFPDDPKPHRRPRFFDTVLVLLFVLAAYPIVGALLTILVAGGNPFGNGFEAATHSFVVRLLVAQAFGQMVVLALPVFWL ARRFSGDGLFGNTTLEWLGIRKHGGSRPALIAGAGMLLLQPALYSIVELQTLLLPYLGTFGKSLLQEQATLDIFLKKLAG GASIGGSVLSILVLVLTPAICEELFFRGYIQKSFVLSLSPQRAVLFTGIVFALFHMEWFNFVPLTLLGWYIGYIYWKSDN LLVPAVAHGTNNLAALVLLKSGIDSGSATDPSSGLLVSWPWWGLVVVSLSLFFLLIRYFPVRPALQDADNPMPPGHRWKS QC
Sequences:
>Translated_322_residues MNFPDDPKPHRRPRFFDTVLVLLFVLAAYPIVGALLTILVAGGNPFGNGFEAATHSFVVRLLVAQAFGQMVVLALPVFWL ARRFSGDGLFGNTTLEWLGIRKHGGSRPALIAGAGMLLLQPALYSIVELQTLLLPYLGTFGKSLLQEQATLDIFLKKLAG GASIGGSVLSILVLVLTPAICEELFFRGYIQKSFVLSLSPQRAVLFTGIVFALFHMEWFNFVPLTLLGWYIGYIYWKSDN LLVPAVAHGTNNLAALVLLKSGIDSGSATDPSSGLLVSWPWWGLVVVSLSLFFLLIRYFPVRPALQDADNPMPPGHRWKS QC >Mature_322_residues MNFPDDPKPHRRPRFFDTVLVLLFVLAAYPIVGALLTILVAGGNPFGNGFEAATHSFVVRLLVAQAFGQMVVLALPVFWL ARRFSGDGLFGNTTLEWLGIRKHGGSRPALIAGAGMLLLQPALYSIVELQTLLLPYLGTFGKSLLQEQATLDIFLKKLAG GASIGGSVLSILVLVLTPAICEELFFRGYIQKSFVLSLSPQRAVLFTGIVFALFHMEWFNFVPLTLLGWYIGYIYWKSDN LLVPAVAHGTNNLAALVLLKSGIDSGSATDPSSGLLVSWPWWGLVVVSLSLFFLLIRYFPVRPALQDADNPMPPGHRWKS QC
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35288; Mature: 35288
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFPDDPKPHRRPRFFDTVLVLLFVLAAYPIVGALLTILVAGGNPFGNGFEAATHSFVVR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH LLVAQAFGQMVVLALPVFWLARRFSGDGLFGNTTLEWLGIRKHGGSRPALIAGAGMLLLQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCCCCHHHCCHHHHHH PALYSIVELQTLLLPYLGTFGKSLLQEQATLDIFLKKLAGGASIGGSVLSILVLVLTPAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH CEELFFRGYIQKSFVLSLSPQRAVLFTGIVFALFHMEWFNFVPLTLLGWYIGYIYWKSDN HHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC LLVPAVAHGTNNLAALVLLKSGIDSGSATDPSSGLLVSWPWWGLVVVSLSLFFLLIRYFP EEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHC VRPALQDADNPMPPGHRWKSQC CCCCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MNFPDDPKPHRRPRFFDTVLVLLFVLAAYPIVGALLTILVAGGNPFGNGFEAATHSFVVR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH LLVAQAFGQMVVLALPVFWLARRFSGDGLFGNTTLEWLGIRKHGGSRPALIAGAGMLLLQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCCCCHHHCCHHHHHH PALYSIVELQTLLLPYLGTFGKSLLQEQATLDIFLKKLAGGASIGGSVLSILVLVLTPAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH CEELFFRGYIQKSFVLSLSPQRAVLFTGIVFALFHMEWFNFVPLTLLGWYIGYIYWKSDN HHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC LLVPAVAHGTNNLAALVLLKSGIDSGSATDPSSGLLVSWPWWGLVVVSLSLFFLLIRYFP EEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHC VRPALQDADNPMPPGHRWKSQC CCCCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA