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The map label for this gene is rutD [H]

Identifier: 21673018

GI number: 21673018

Start: 186856

End: 187779

Strand: Reverse

Name: rutD [H]

Synonym: CT0177

Alternate gene names: 21673018

Gene position: 187779-186856 (Counterclockwise)

Preceding gene: 21673024

Following gene: 21673017

Centisome position: 8.71

GC content: 58.12

Gene sequence:

>924_bases
ATGAGTTACCTTACTTCGTCACGTTGCAAACTTTTCTATGAGGATACCGCCGAACAGAATCCTTCGCTGAAGGACAAACC
GGCGATTCTCTTCGTCAACGGCTGGGCGATTTCGTCCCGGTACTGGAGGCCCACTATCGACCTGCTCAGGCAGGATTTCC
GCTGCGTCACCTACGACCAGAGCGGCACGGGCAAAACCTCCATCGACGGGTGCCAGCCCGATCTGACGATTGGCGGATTC
GCCGATGAGGCCGGCGCATTGATCGAGCATCTCGGGCTCGACAAAAGCCGAAACCTGCACATCGTCGGCCACTCGATGGG
AGGCATGGTGGCCACGGAGCTGTGCTTGCGCTACCGCGACGCGCTACTCTCGGCAACGATTCTGGCCTGCGGTATTTTCG
AGGAGACGCCGTTCACCTCGCTCGGCCTGATGTTCCTCGGCGGACTGATCGACGTTTCGATGAACTTCCGGAACATGTTC
CGGGTTGAACCGCTGCGCACACTCTTCATCAAGCGTGCAGCCACCGGGCACATCAGCAAGGAGTACAGCGACATCATCAT
CGAGGATTTCACCACATCCGACAAGGCGGCCACCAACGCGGTGGGCCATTTCTCAATCGATCCCGAAGCGCTGCGAACCT
ACACCCGGAGCGTCATCGAGATCGCCTCGCCGGTGCTCTGCTGCGTCGGCATGGCCGACCACACCATTCCGCCCGAAGGC
ACCATCACGCTGTTCGAGAAGCGCAAGGCGTCAGCGACATCGCCAACAAGGCTCGTACAGTTCATGCACCTCGGCCATCT
GCCCATGCTCGAAGACACGCCGTGCTTTGTCGAGCAGCTGAAAAAACATTTTGATTTTGCGGAACATTTTTATAAAAAGA
CTCAGCCTGCCACGCCTCTGGCCGACCGGGTGCAGATTCAATGA

Upstream 100 bases:

>100_bases
TGATGTTCATTCATCATTCAGCATTCTATATTCTATATGGTATATTTCTATATGGTATATTTGAGTTCAGTTTTTCGCAG
AGATCAAACCGGCCGAGCCT

Downstream 100 bases:

>100_bases
AATGATTCAACGGAAAAAATGTTCCTGTTGAAAACAGACGCTTATGATTCACCATTCTGAACCTTTGTCAACGTGAGTAA
AAAATTTGTTATGAAAATTG

Product: proline iminopeptidase, putative

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSYLTSSRCKLFYEDTAEQNPSLKDKPAILFVNGWAISSRYWRPTIDLLRQDFRCVTYDQSGTGKTSIDGCQPDLTIGGF
ADEAGALIEHLGLDKSRNLHIVGHSMGGMVATELCLRYRDALLSATILACGIFEETPFTSLGLMFLGGLIDVSMNFRNMF
RVEPLRTLFIKRAATGHISKEYSDIIIEDFTTSDKAATNAVGHFSIDPEALRTYTRSVIEIASPVLCCVGMADHTIPPEG
TITLFEKRKASATSPTRLVQFMHLGHLPMLEDTPCFVEQLKKHFDFAEHFYKKTQPATPLADRVQIQ

Sequences:

>Translated_307_residues
MSYLTSSRCKLFYEDTAEQNPSLKDKPAILFVNGWAISSRYWRPTIDLLRQDFRCVTYDQSGTGKTSIDGCQPDLTIGGF
ADEAGALIEHLGLDKSRNLHIVGHSMGGMVATELCLRYRDALLSATILACGIFEETPFTSLGLMFLGGLIDVSMNFRNMF
RVEPLRTLFIKRAATGHISKEYSDIIIEDFTTSDKAATNAVGHFSIDPEALRTYTRSVIEIASPVLCCVGMADHTIPPEG
TITLFEKRKASATSPTRLVQFMHLGHLPMLEDTPCFVEQLKKHFDFAEHFYKKTQPATPLADRVQIQ
>Mature_306_residues
SYLTSSRCKLFYEDTAEQNPSLKDKPAILFVNGWAISSRYWRPTIDLLRQDFRCVTYDQSGTGKTSIDGCQPDLTIGGFA
DEAGALIEHLGLDKSRNLHIVGHSMGGMVATELCLRYRDALLSATILACGIFEETPFTSLGLMFLGGLIDVSMNFRNMFR
VEPLRTLFIKRAATGHISKEYSDIIIEDFTTSDKAATNAVGHFSIDPEALRTYTRSVIEIASPVLCCVGMADHTIPPEGT
ITLFEKRKASATSPTRLVQFMHLGHLPMLEDTPCFVEQLKKHFDFAEHFYKKTQPATPLADRVQIQ

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 34255; Mature: 34124

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYLTSSRCKLFYEDTAEQNPSLKDKPAILFVNGWAISSRYWRPTIDLLRQDFRCVTYDQ
CCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECEEECCCCCCHHHHHHHCCCEEEEECC
SGTGKTSIDGCQPDLTIGGFADEAGALIEHLGLDKSRNLHIVGHSMGGMVATELCLRYRD
CCCCCCCCCCCCCCCEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHH
ALLSATILACGIFEETPFTSLGLMFLGGLIDVSMNFRNMFRVEPLRTLFIKRAATGHISK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCCCHH
EYSDIIIEDFTTSDKAATNAVGHFSIDPEALRTYTRSVIEIASPVLCCVGMADHTIPPEG
HHHHHEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TITLFEKRKASATSPTRLVQFMHLGHLPMLEDTPCFVEQLKKHFDFAEHFYKKTQPATPL
CEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
ADRVQIQ
CCCCCCC
>Mature Secondary Structure 
SYLTSSRCKLFYEDTAEQNPSLKDKPAILFVNGWAISSRYWRPTIDLLRQDFRCVTYDQ
CCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECEEECCCCCCHHHHHHHCCCEEEEECC
SGTGKTSIDGCQPDLTIGGFADEAGALIEHLGLDKSRNLHIVGHSMGGMVATELCLRYRD
CCCCCCCCCCCCCCCEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHH
ALLSATILACGIFEETPFTSLGLMFLGGLIDVSMNFRNMFRVEPLRTLFIKRAATGHISK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCCCHH
EYSDIIIEDFTTSDKAATNAVGHFSIDPEALRTYTRSVIEIASPVLCCVGMADHTIPPEG
HHHHHEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TITLFEKRKASATSPTRLVQFMHLGHLPMLEDTPCFVEQLKKHFDFAEHFYKKTQPATPL
CEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
ADRVQIQ
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA