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The map label for this gene is ybhR [C]

Identifier: 21673024

GI number: 21673024

Start: 193002

End: 193847

Strand: Reverse

Name: ybhR [C]

Synonym: CT0183

Alternate gene names: 21673024

Gene position: 193847-193002 (Counterclockwise)

Preceding gene: 21673025

Following gene: 21673018

Centisome position: 9.0

GC content: 62.65

Gene sequence:

>846_bases
GTGACAGCAAGCCAAACTTCCGCGACATCAACCGCGCCCGCCGGACGGCCAAACGGCTGGGCTGACAAGTTCGACCCCAC
CGGGTTCCTGCGCGACACGGCAGCCATCGTCGCCACGGAGCTGGCCAAGCTGCGCCGCGACCCATCGGAAATCCTCAGCC
GCTCGATCCAGCCCGCGCTCTGGCTGCTGGTGTTCGGCCAAGTGTTCGGGCGAATGCGCGCCATCCCCACCGGTAACCTC
GACTACTTCAGCTTCCTCGCGCCGGGCATCCTCGCGCAAAGCGTGCTCTTCATCGCGATTTTCTACGGCATCAACGTCAT
CTGGGAAAAAGACCTCGGCATTTTGCAGAAGCTGCTCGCCAGCCCCGCCCCGCGGAGCTCGCTCGTCTTCGGCAAGGCGG
TCTCGGCGGGAATGCGCGCCATCGCGCAGGCGGCCATCGTCTATCTGATGGCGCTCGTCGCGGGCGTCGATCTGAACTGG
TCACCTCTCGCACTCTGCGGCGTGCTCGTCGCCATCGTGCTCGGCGCGGCGCTCTTCTCGACCTTTTCGCTCATGATCGC
CTGCCTGGTGCGATCGCGCGAACGGTTCATGGGCATCGGCCAGGTCATGACCATGCCCCTCTTCTTCGCCAGCAACGCCA
TCTACCCGATCTCGATCATGCCCACCTGGCTCAAAATCATCGCCCACATCAACCCGCTCACCTACCAGGTTGACCTCCTC
CGCGCGTTGATGGTGACCGCTGGCACCAGCACCTTCGGCATCGGGACAGATTTTTTGATGTTAACCGGAATGCTCATCGC
GCTGATCGTCGTGACCTCGAAACTCTATCCGAGGATTGTGCAGTAA

Upstream 100 bases:

>100_bases
GAGGGGGTCATCGCCGCCGAGGGATCGGCGGAGGAGCTGAAGCAGCGCGCCGGAACCGAATCGATGAACCAGGTTTTCAT
TCACTTTGCAGGAGAGTTCA

Downstream 100 bases:

>100_bases
TACCCCCTCACTCCCCCTGCTTTTCAGTCAGATATTTCCAGTACTTCGCTGGCATGTTGGATTGCTGAAGGCGGGGGTTT
TTTCGTTCGGGAATGGCGAT

Product: ABC-type drug export system, membrane protein

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC-Type Multidrug Transport System Permease Component; ABC-2 Type Transporter Superfamily; ABC Transporter; Multidrug ABC Transporter Permease Protein; Multidrug Efflux ABC Transporter; Daunorubicin Resistance ABC Transporter Membrane Protein; ABC Transporter Permease; ABC Transporter Transmembrane Protein; ABC-Type Drug Export System Membrane Protein; ABC Transporter Transmembrane Component; Daunorubicin Resistance Membrane Protein; Antibiotic Export Permease Protein; Multidrug ABC Transporter Permease Component; ABC-2 Type Transport System Permease Protein; Daunorubicin Resistance ABC Transporter Permease; Antibiotic ABC Transporter Transmembrane Protein; ABC Transporter Transmembrane Subunit; Abc-2 Type Transporter Integral Membrane Subunit; Efflux ABC Transporter Permease Protein; ABC Efflux Pump Inner Membrane Subunit; Multidrug ABC Transporter Permease; Drug ABC Transporter Membrane Protein; ABC Multidrug Efflux Pump Inner Membrane Subunit; ABC-Transporter; Drug Exporter ABC Transporter Permease; ABC-2 Transporter Component; ABC Multidrug Transporter Permease Component; Daunorubicin Resistance Transmembrane Protein; ABC Type Transporter Permease Component; ABC-Type Drug Export System; ABC Transporter Membrane Protein; ABC-2 Type Tranporter; Multidrug ABC Transporter; ABC Transporter Permease Component; Daunorubicin Resistance ABC Transporter Permease Protein; Transporter ABC-2 Integral Membrane Protein Family; ABC-Type Multidrug Transport System Permease; Antibiotic Resistance ABC Transporter Permease Protein; ABC Transporter Protein

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTASQTSATSTAPAGRPNGWADKFDPTGFLRDTAAIVATELAKLRRDPSEILSRSIQPALWLLVFGQVFGRMRAIPTGNL
DYFSFLAPGILAQSVLFIAIFYGINVIWEKDLGILQKLLASPAPRSSLVFGKAVSAGMRAIAQAAIVYLMALVAGVDLNW
SPLALCGVLVAIVLGAALFSTFSLMIACLVRSRERFMGIGQVMTMPLFFASNAIYPISIMPTWLKIIAHINPLTYQVDLL
RALMVTAGTSTFGIGTDFLMLTGMLIALIVVTSKLYPRIVQ

Sequences:

>Translated_281_residues
MTASQTSATSTAPAGRPNGWADKFDPTGFLRDTAAIVATELAKLRRDPSEILSRSIQPALWLLVFGQVFGRMRAIPTGNL
DYFSFLAPGILAQSVLFIAIFYGINVIWEKDLGILQKLLASPAPRSSLVFGKAVSAGMRAIAQAAIVYLMALVAGVDLNW
SPLALCGVLVAIVLGAALFSTFSLMIACLVRSRERFMGIGQVMTMPLFFASNAIYPISIMPTWLKIIAHINPLTYQVDLL
RALMVTAGTSTFGIGTDFLMLTGMLIALIVVTSKLYPRIVQ
>Mature_280_residues
TASQTSATSTAPAGRPNGWADKFDPTGFLRDTAAIVATELAKLRRDPSEILSRSIQPALWLLVFGQVFGRMRAIPTGNLD
YFSFLAPGILAQSVLFIAIFYGINVIWEKDLGILQKLLASPAPRSSLVFGKAVSAGMRAIAQAAIVYLMALVAGVDLNWS
PLALCGVLVAIVLGAALFSTFSLMIACLVRSRERFMGIGQVMTMPLFFASNAIYPISIMPTWLKIIAHINPLTYQVDLLR
ALMVTAGTSTFGIGTDFLMLTGMLIALIVVTSKLYPRIVQ

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787010, Length=167, Percent_Identity=30.5389221556886, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30321; Mature: 30189

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASQTSATSTAPAGRPNGWADKFDPTGFLRDTAAIVATELAKLRRDPSEILSRSIQPAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHH
WLLVFGQVFGRMRAIPTGNLDYFSFLAPGILAQSVLFIAIFYGINVIWEKDLGILQKLLA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPAPRSSLVFGKAVSAGMRAIAQAAIVYLMALVAGVDLNWSPLALCGVLVAIVLGAALFS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
TFSLMIACLVRSRERFMGIGQVMTMPLFFASNAIYPISIMPTWLKIIAHINPLTYQVDLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCHHHHHHHH
RALMVTAGTSTFGIGTDFLMLTGMLIALIVVTSKLYPRIVQ
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TASQTSATSTAPAGRPNGWADKFDPTGFLRDTAAIVATELAKLRRDPSEILSRSIQPAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHH
WLLVFGQVFGRMRAIPTGNLDYFSFLAPGILAQSVLFIAIFYGINVIWEKDLGILQKLLA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPAPRSSLVFGKAVSAGMRAIAQAAIVYLMALVAGVDLNWSPLALCGVLVAIVLGAALFS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
TFSLMIACLVRSRERFMGIGQVMTMPLFFASNAIYPISIMPTWLKIIAHINPLTYQVDLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCHHHHHHHH
RALMVTAGTSTFGIGTDFLMLTGMLIALIVVTSKLYPRIVQ
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA