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The map label for this gene is yfcH [C]

Identifier: 21672972

GI number: 21672972

Start: 126478

End: 127419

Strand: Direct

Name: yfcH [C]

Synonym: CT0131

Alternate gene names: 21672972

Gene position: 126478-127419 (Clockwise)

Preceding gene: 21672971

Following gene: 21672974

Centisome position: 5.87

GC content: 55.52

Gene sequence:

>942_bases
ATGGAAGGCCATATCGTTATCACGGGCGCTACCGGAGTGATTGGCAGCGAAGTTGCTCGCAGGCTTATCAAATCTGGCAG
GGAGGTCGTTGTTTTTGCCCGATCTCCACAATCGGCAGCGGCAAAAGTCCCTGGTGCGGCGGATTATGTGCGCTGGGACT
CGGATATGGCTCCGGATGGATGGAGCTCATCGATCGATGGCGCGTATGCGGTTATTCATCTTGCCGGTCGGCCGCTACTT
GAAACCCGCTGGACCGAGGAGCACAAAGTGGCCTGCTACGACTCCCGCATCAAGGGCACCAGGGCGCTGGTGGCTGCGAT
GGCGTCAGCATCAGTCAAACCCAAAGTGTTCGTTTCTTCTTCGGCTATCGGCTACTATGGTTCGTTTGATCGGTGCGAAG
AGACCGACCCATTGACGGAGAAGGCCGCGCCGGGCAAGGATTTTCTCGCTAAAATCTGTTTCGACTGGGAAAAGGAGGCT
CGTCCGGCGGAAACGCTTGGCACGAGAGTTGTTCTCCTCAGAACCGGTATTGTGCTTTCCACCAAAGGGGGGATGTTGCA
GAAGATGATGATCCCCTTCAGTTACTTTGTCGGCGGGCCGGTTGGCTCCGGCGATCAGTGCCTGTCATGGATTCATCTCG
ATGACGAGGTGTCGATCATTCTTCAAGCGCTCGATAATGCTGACTGGAGCGGCCCTGTTAATGCGGTTGCTCCTGAACCT
GTCAGCATGAAAGCTTTTGCAGATTCGCTTGGTTTGGTGATGCATCGGCCATCCCTGTTTCCGGTGCCGAAGTTGGCGGT
TCAGATACTTCTGGGAGAGGGTGCCGACTATGCCGTCAAGGGGCAGAAGGTTTCGCCGGAGTTTCTCAAAGAGCGCGACT
TTCATTTCGCCTGGCCGTCGCTGAATGAAGCGCTTGCCGATCTTGTTTCAAGAGGGATTTGA

Upstream 100 bases:

>100_bases
CGTAGCAGTTTACAGCAACAGAGGCTTTCGGGAATTATTTCTTCACCTCTTCCGGTTATCTGTCGAACAGTAACACCTAC
CTAATTCAAACCGCAGACTC

Downstream 100 bases:

>100_bases
CCGGCAGCGTTTACCTCTGACCCCCGAAGGGGACCGCATCGGTGTCAAGGCCGACACGTGAAATATAAAAAGCGGGTCAG
GCATTTTTTATAAGCCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MEGHIVITGATGVIGSEVARRLIKSGREVVVFARSPQSAAAKVPGAADYVRWDSDMAPDGWSSSIDGAYAVIHLAGRPLL
ETRWTEEHKVACYDSRIKGTRALVAAMASASVKPKVFVSSSAIGYYGSFDRCEETDPLTEKAAPGKDFLAKICFDWEKEA
RPAETLGTRVVLLRTGIVLSTKGGMLQKMMIPFSYFVGGPVGSGDQCLSWIHLDDEVSIILQALDNADWSGPVNAVAPEP
VSMKAFADSLGLVMHRPSLFPVPKLAVQILLGEGADYAVKGQKVSPEFLKERDFHFAWPSLNEALADLVSRGI

Sequences:

>Translated_313_residues
MEGHIVITGATGVIGSEVARRLIKSGREVVVFARSPQSAAAKVPGAADYVRWDSDMAPDGWSSSIDGAYAVIHLAGRPLL
ETRWTEEHKVACYDSRIKGTRALVAAMASASVKPKVFVSSSAIGYYGSFDRCEETDPLTEKAAPGKDFLAKICFDWEKEA
RPAETLGTRVVLLRTGIVLSTKGGMLQKMMIPFSYFVGGPVGSGDQCLSWIHLDDEVSIILQALDNADWSGPVNAVAPEP
VSMKAFADSLGLVMHRPSLFPVPKLAVQILLGEGADYAVKGQKVSPEFLKERDFHFAWPSLNEALADLVSRGI
>Mature_313_residues
MEGHIVITGATGVIGSEVARRLIKSGREVVVFARSPQSAAAKVPGAADYVRWDSDMAPDGWSSSIDGAYAVIHLAGRPLL
ETRWTEEHKVACYDSRIKGTRALVAAMASASVKPKVFVSSSAIGYYGSFDRCEETDPLTEKAAPGKDFLAKICFDWEKEA
RPAETLGTRVVLLRTGIVLSTKGGMLQKMMIPFSYFVGGPVGSGDQCLSWIHLDDEVSIILQALDNADWSGPVNAVAPEP
VSMKAFADSLGLVMHRPSLFPVPKLAVQILLGEGADYAVKGQKVSPEFLKERDFHFAWPSLNEALADLVSRGI

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=312, Percent_Identity=31.4102564102564, Blast_Score=149, Evalue=4e-36,
Organism=Escherichia coli, GI1788642, Length=306, Percent_Identity=41.5032679738562, Blast_Score=230, Evalue=9e-62,
Organism=Drosophila melanogaster, GI28573846, Length=318, Percent_Identity=33.6477987421384, Blast_Score=169, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33753; Mature: 33753

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGHIVITGATGVIGSEVARRLIKSGREVVVFARSPQSAAAKVPGAADYVRWDSDMAPDG
CCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHCCCCCHHHEECCCCCCCCC
WSSSIDGAYAVIHLAGRPLLETRWTEEHKVACYDSRIKGTRALVAAMASASVKPKVFVSS
CCCCCCCEEEEEEECCCCHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEC
SAIGYYGSFDRCEETDPLTEKAAPGKDFLAKICFDWEKEARPAETLGTRVVLLRTGIVLS
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCEEEE
TKGGMLQKMMIPFSYFVGGPVGSGDQCLSWIHLDDEVSIILQALDNADWSGPVNAVAPEP
CCCCHHHHHHHHHHHHCCCCCCCHHHHEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCC
VSMKAFADSLGLVMHRPSLFPVPKLAVQILLGEGADYAVKGQKVSPEFLKERDFHFAWPS
CHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHCCCCEEECCC
LNEALADLVSRGI
HHHHHHHHHHCCC
>Mature Secondary Structure
MEGHIVITGATGVIGSEVARRLIKSGREVVVFARSPQSAAAKVPGAADYVRWDSDMAPDG
CCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHCCCCCHHHEECCCCCCCCC
WSSSIDGAYAVIHLAGRPLLETRWTEEHKVACYDSRIKGTRALVAAMASASVKPKVFVSS
CCCCCCCEEEEEEECCCCHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEC
SAIGYYGSFDRCEETDPLTEKAAPGKDFLAKICFDWEKEARPAETLGTRVVLLRTGIVLS
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCEEEE
TKGGMLQKMMIPFSYFVGGPVGSGDQCLSWIHLDDEVSIILQALDNADWSGPVNAVAPEP
CCCCHHHHHHHHHHHHCCCCCCCHHHHEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCC
VSMKAFADSLGLVMHRPSLFPVPKLAVQILLGEGADYAVKGQKVSPEFLKERDFHFAWPS
CHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHCCCCEEECCC
LNEALADLVSRGI
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]