| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21672927
Identifier: 21672927
GI number: 21672927
Start: 80671
End: 82158
Strand: Direct
Name: 21672927
Synonym: CT0086
Alternate gene names: NA
Gene position: 80671-82158 (Clockwise)
Preceding gene: 21672926
Following gene: 21672930
Centisome position: 3.74
GC content: 61.9
Gene sequence:
>1488_bases ATGATCGATCAAAGAACGAGTTACCCTTCTTCCATGACCCGACACCTTTCCCCATTCTGGCTGAACCGGCTGCTCGGCAT TCCCTCCTCGACGCCGCTCACCCCCCGCCTCATGGCATCGACGTTGCGCGTGGCCTTCTGTCCGTTGCAGGAAGAGAGTC CCCGGCTTGACCACTTCATCACAGCGTTGCGAGAGTCATTCGTGGAGTGCGGGGTAACGATAGTCGAAGAGGCTGCAGGT GAAGGACGGGATTCGCGCGTCGAGGCGGGGACGGCGCTCATCGCGCCGGGCAGATTCGAGGACCATCAGCTGCCGATCAG CCGCGTCTCGACGCTCTACAACAACCTGATCGTCGGCGTCTACGACGAGCCGCCGCCGGTGCATGGTGGTCAGACGCCGC AGGAGAGGCTCGACGCGGTGGTCGGCAAGCTCGCTTGGGAGATGGTGCATCTGTTGATCTATGTGACCGAAAATTCGTGG ACGGTGTGCAGCATGAACGGTGGCATCACCACCTTCGACACGCCGCTGCCGGAGTCGCGTGACGTACTCGAATCGCTGAT TCCGAAGCTCACCGCGCAGGTGGTGCCGCCACGCGACGGCGAGCTGGAGCTTCGGACCGGAGCGCTCGACACCTCGGCCC CAGAGTTCCTGGAGTTCGCCGCTGATTTTGTGGAGTGTGGACGCATCTGGGCGGGAAACGAGCGCTTCATGAACCACACC TCGCGCGAGTCGCTCGACTACCGTAACGGCTTCTGCCGCAAGATCGTTTCGCGCTACCTTGACGAGCGTAACGGTATGAG CTACGGTTTCTTCGCCCGCCAGCTCCCGGTGAAGGTCGCGCCTGCAATCGAGGCTGATGACCTCGGCGGAACATCAGTCG GCGACGCATTGGTGCCGGTGACAATCGCCGGGAAACAGCTGCTCGTGCCCGTGCCCGGCGTGCGTATCCTTACAACACGG TCGGGATGCCGGAAAACCGCCATCGACCCGCGCCATGACCTGGTGGAGATCGGTCTCGACAACGGACATGCATGGCTGGT CACACCTGCCGGATTGCCGGAGGGCCTCGTCTCGAAGCCCTCGTTCGACACGCTGACCATCATAGCCCACGCTATCGGCA ATGCGATGATCGCCAGCATTCTGCTCGCGCTTGCACCTGGCAACCGCTTTCCCGGTCTGCTGGCGCGCTTTGGCTGTGGC ATGACGCATTGGCACTACTATCTCGACGAGGAGATGATTCCGGACGGCTACGTGGTGCATGGTTTCGACAATCCACCGGT GTCGTGCTCAACACCGCAATCGGCGGCCTACAGCCTGCTCGGGAAGCTCGACGCGCTGGAACGGGCGCTCGAAGGCGGTA CCGATTACCTCGGTGACGTGCACATCGAACCGGGCCATGGCACTAACGTGGTCGGCACGAGATCACTGGCCAAAATGGCG ATGTTTCTGAACGCCGATAGTTGCGTTTGTTCGCAACGGGAGGGGTGA
Upstream 100 bases:
>100_bases GAAAAAAGGAACTACTGCGAAATCCTTCGCAAAAAGCTGCTCTGGAGTCACGAACATCCCACGGGAGAGTGACTTCCACA GTCTTTTCCGATACCCTCTC
Downstream 100 bases:
>100_bases GGAGGGGCCGGTTCTAACTGGCTTGGCAGTGCAGGTCTTTTTCTGGAACTCCCTGTCGATGTCGGGATCGATTCACCGGC GCAACGATTTCGACTTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 495; Mature: 495
Protein sequence:
>495_residues MIDQRTSYPSSMTRHLSPFWLNRLLGIPSSTPLTPRLMASTLRVAFCPLQEESPRLDHFITALRESFVECGVTIVEEAAG EGRDSRVEAGTALIAPGRFEDHQLPISRVSTLYNNLIVGVYDEPPPVHGGQTPQERLDAVVGKLAWEMVHLLIYVTENSW TVCSMNGGITTFDTPLPESRDVLESLIPKLTAQVVPPRDGELELRTGALDTSAPEFLEFAADFVECGRIWAGNERFMNHT SRESLDYRNGFCRKIVSRYLDERNGMSYGFFARQLPVKVAPAIEADDLGGTSVGDALVPVTIAGKQLLVPVPGVRILTTR SGCRKTAIDPRHDLVEIGLDNGHAWLVTPAGLPEGLVSKPSFDTLTIIAHAIGNAMIASILLALAPGNRFPGLLARFGCG MTHWHYYLDEEMIPDGYVVHGFDNPPVSCSTPQSAAYSLLGKLDALERALEGGTDYLGDVHIEPGHGTNVVGTRSLAKMA MFLNADSCVCSQREG
Sequences:
>Translated_495_residues MIDQRTSYPSSMTRHLSPFWLNRLLGIPSSTPLTPRLMASTLRVAFCPLQEESPRLDHFITALRESFVECGVTIVEEAAG EGRDSRVEAGTALIAPGRFEDHQLPISRVSTLYNNLIVGVYDEPPPVHGGQTPQERLDAVVGKLAWEMVHLLIYVTENSW TVCSMNGGITTFDTPLPESRDVLESLIPKLTAQVVPPRDGELELRTGALDTSAPEFLEFAADFVECGRIWAGNERFMNHT SRESLDYRNGFCRKIVSRYLDERNGMSYGFFARQLPVKVAPAIEADDLGGTSVGDALVPVTIAGKQLLVPVPGVRILTTR SGCRKTAIDPRHDLVEIGLDNGHAWLVTPAGLPEGLVSKPSFDTLTIIAHAIGNAMIASILLALAPGNRFPGLLARFGCG MTHWHYYLDEEMIPDGYVVHGFDNPPVSCSTPQSAAYSLLGKLDALERALEGGTDYLGDVHIEPGHGTNVVGTRSLAKMA MFLNADSCVCSQREG >Mature_495_residues MIDQRTSYPSSMTRHLSPFWLNRLLGIPSSTPLTPRLMASTLRVAFCPLQEESPRLDHFITALRESFVECGVTIVEEAAG EGRDSRVEAGTALIAPGRFEDHQLPISRVSTLYNNLIVGVYDEPPPVHGGQTPQERLDAVVGKLAWEMVHLLIYVTENSW TVCSMNGGITTFDTPLPESRDVLESLIPKLTAQVVPPRDGELELRTGALDTSAPEFLEFAADFVECGRIWAGNERFMNHT SRESLDYRNGFCRKIVSRYLDERNGMSYGFFARQLPVKVAPAIEADDLGGTSVGDALVPVTIAGKQLLVPVPGVRILTTR SGCRKTAIDPRHDLVEIGLDNGHAWLVTPAGLPEGLVSKPSFDTLTIIAHAIGNAMIASILLALAPGNRFPGLLARFGCG MTHWHYYLDEEMIPDGYVVHGFDNPPVSCSTPQSAAYSLLGKLDALERALEGGTDYLGDVHIEPGHGTNVVGTRSLAKMA MFLNADSCVCSQREG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53937; Mature: 53937
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDQRTSYPSSMTRHLSPFWLNRLLGIPSSTPLTPRLMASTLRVAFCPLQEESPRLDHFI CCCCCCCCCHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH TALRESFVECGVTIVEEAAGEGRDSRVEAGTALIAPGRFEDHQLPISRVSTLYNNLIVGV HHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCEEEE YDEPPPVHGGQTPQERLDAVVGKLAWEMVHLLIYVTENSWTVCSMNGGITTFDTPLPESR ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECCCEEECCCCCCCHH DVLESLIPKLTAQVVPPRDGELELRTGALDTSAPEFLEFAADFVECGRIWAGNERFMNHT HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEECCCHHHHCCC SRESLDYRNGFCRKIVSRYLDERNGMSYGFFARQLPVKVAPAIEADDLGGTSVGDALVPV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCEEECCCCCCCCCCCCCCCCCEEEE TIAGKQLLVPVPGVRILTTRSGCRKTAIDPRHDLVEIGLDNGHAWLVTPAGLPEGLVSKP EECCCEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCC SFDTLTIIAHAIGNAMIASILLALAPGNRFPGLLARFGCGMTHWHYYLDEEMIPDGYVVH CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHEEECCCCCCCCEEEE GFDNPPVSCSTPQSAAYSLLGKLDALERALEGGTDYLGDVHIEPGHGTNVVGTRSLAKMA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHH MFLNADSCVCSQREG HHHCCCHHCCCCCCC >Mature Secondary Structure MIDQRTSYPSSMTRHLSPFWLNRLLGIPSSTPLTPRLMASTLRVAFCPLQEESPRLDHFI CCCCCCCCCHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH TALRESFVECGVTIVEEAAGEGRDSRVEAGTALIAPGRFEDHQLPISRVSTLYNNLIVGV HHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCEEEE YDEPPPVHGGQTPQERLDAVVGKLAWEMVHLLIYVTENSWTVCSMNGGITTFDTPLPESR ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECCCEEECCCCCCCHH DVLESLIPKLTAQVVPPRDGELELRTGALDTSAPEFLEFAADFVECGRIWAGNERFMNHT HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEECCCHHHHCCC SRESLDYRNGFCRKIVSRYLDERNGMSYGFFARQLPVKVAPAIEADDLGGTSVGDALVPV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCEEECCCCCCCCCCCCCCCCCEEEE TIAGKQLLVPVPGVRILTTRSGCRKTAIDPRHDLVEIGLDNGHAWLVTPAGLPEGLVSKP EECCCEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCC SFDTLTIIAHAIGNAMIASILLALAPGNRFPGLLARFGCGMTHWHYYLDEEMIPDGYVVH CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHEEECCCCCCCCEEEE GFDNPPVSCSTPQSAAYSLLGKLDALERALEGGTDYLGDVHIEPGHGTNVVGTRSLAKMA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHH MFLNADSCVCSQREG HHHCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA