Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21672901

Identifier: 21672901

GI number: 21672901

Start: 60635

End: 61315

Strand: Direct

Name: 21672901

Synonym: CT0060

Alternate gene names: NA

Gene position: 60635-61315 (Clockwise)

Preceding gene: 21672896

Following gene: 21672905

Centisome position: 2.81

GC content: 59.62

Gene sequence:

>681_bases
ATGATCAAACGACGCATATGCCACATGTTTGGCGCAATGATCCCTCTTCTGCTCGCTACCCTGTTCATGGCTGCCTGCAA
CGGAAACACCCCGAAGCGGGTCACCGACATTGACGGCAATACCTATGGAACGGTGAACATTGGCGGACATGTCTGGATGG
CGGAAAACCTGCGAGTGACCCGTTACCGGAATGGCGATCCCATCGCGGAGGTGAAGGAGGGCGCCTCGTGGACCGCACAG
ACAGCCGGAGCGCGATGCTCTTACGACAACAGCCCGGAAAACGGTAAAACATACGGCTTTCTCTACAACTGGTATGCCGT
CAGCGATCCGAGAGGTCTCGCTCCCGAAGGCTGGCACGTGGCTACTGACAAGGAGTGGCAGGCGCTGGCCGATGCTCTCG
GCGGTGAACAGGAGGCCGGTGCTGGCCTGAAAGCTCCTGGAAAATGGGGCAATTCATCCGGAGAAACCCAAAGCAGCGGG
TTCAATGCCTTGCCCTCCGGCGCTCGCCGGGATGCCGACGGTGTTTTCCTCATGCTCGGCCAGTTTGCGCGCTTCTGGAC
CTCCACGCCGGCCAGTAACGGCAAAGCTCTCGCCCGAGCTTTAGGCTTCTACGACAACGCCCTGCGCGTCGGAGAAGTTG
TCCCCAGGAACGGCTTTGCCGTGCGGTGTGTCAAGGATTGA

Upstream 100 bases:

>100_bases
TACATTGTCTTCGATAAACTTCGTTAACATTTGTTCTCCCCCTTCGCCATGCTCCAACAGGCAAAATCCGGAGAACGTAT
TCAAACAATGGAACCTGACG

Downstream 100 bases:

>100_bases
CGAGGCGCACATTTTGCCCATCAGATACCAAAACGGCAACTACTCGCTCTGTTCCATCAACGGTTCTTTTTCTGTCGTCT
CCGCTTCAGCGGCGGTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MIKRRICHMFGAMIPLLLATLFMAACNGNTPKRVTDIDGNTYGTVNIGGHVWMAENLRVTRYRNGDPIAEVKEGASWTAQ
TAGARCSYDNSPENGKTYGFLYNWYAVSDPRGLAPEGWHVATDKEWQALADALGGEQEAGAGLKAPGKWGNSSGETQSSG
FNALPSGARRDADGVFLMLGQFARFWTSTPASNGKALARALGFYDNALRVGEVVPRNGFAVRCVKD

Sequences:

>Translated_226_residues
MIKRRICHMFGAMIPLLLATLFMAACNGNTPKRVTDIDGNTYGTVNIGGHVWMAENLRVTRYRNGDPIAEVKEGASWTAQ
TAGARCSYDNSPENGKTYGFLYNWYAVSDPRGLAPEGWHVATDKEWQALADALGGEQEAGAGLKAPGKWGNSSGETQSSG
FNALPSGARRDADGVFLMLGQFARFWTSTPASNGKALARALGFYDNALRVGEVVPRNGFAVRCVKD
>Mature_226_residues
MIKRRICHMFGAMIPLLLATLFMAACNGNTPKRVTDIDGNTYGTVNIGGHVWMAENLRVTRYRNGDPIAEVKEGASWTAQ
TAGARCSYDNSPENGKTYGFLYNWYAVSDPRGLAPEGWHVATDKEWQALADALGGEQEAGAGLKAPGKWGNSSGETQSSG
FNALPSGARRDADGVFLMLGQFARFWTSTPASNGKALARALGFYDNALRVGEVVPRNGFAVRCVKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24372; Mature: 24372

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRRICHMFGAMIPLLLATLFMAACNGNTPKRVTDIDGNTYGTVNIGGHVWMAENLRVT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCEEEEECCEEEE
RYRNGDPIAEVKEGASWTAQTAGARCSYDNSPENGKTYGFLYNWYAVSDPRGLAPEGWHV
EECCCCCHHHHHCCCCEEHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEE
ATDKEWQALADALGGEQEAGAGLKAPGKWGNSSGETQSSGFNALPSGARRDADGVFLMLG
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
QFARFWTSTPASNGKALARALGFYDNALRVGEVVPRNGFAVRCVKD
HHHHHHCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCEEEEEECC
>Mature Secondary Structure
MIKRRICHMFGAMIPLLLATLFMAACNGNTPKRVTDIDGNTYGTVNIGGHVWMAENLRVT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCEEEEECCEEEE
RYRNGDPIAEVKEGASWTAQTAGARCSYDNSPENGKTYGFLYNWYAVSDPRGLAPEGWHV
EECCCCCHHHHHCCCCEEHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEE
ATDKEWQALADALGGEQEAGAGLKAPGKWGNSSGETQSSGFNALPSGARRDADGVFLMLG
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
QFARFWTSTPASNGKALARALGFYDNALRVGEVVPRNGFAVRCVKD
HHHHHHCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA