| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21672901
Identifier: 21672901
GI number: 21672901
Start: 60635
End: 61315
Strand: Direct
Name: 21672901
Synonym: CT0060
Alternate gene names: NA
Gene position: 60635-61315 (Clockwise)
Preceding gene: 21672896
Following gene: 21672905
Centisome position: 2.81
GC content: 59.62
Gene sequence:
>681_bases ATGATCAAACGACGCATATGCCACATGTTTGGCGCAATGATCCCTCTTCTGCTCGCTACCCTGTTCATGGCTGCCTGCAA CGGAAACACCCCGAAGCGGGTCACCGACATTGACGGCAATACCTATGGAACGGTGAACATTGGCGGACATGTCTGGATGG CGGAAAACCTGCGAGTGACCCGTTACCGGAATGGCGATCCCATCGCGGAGGTGAAGGAGGGCGCCTCGTGGACCGCACAG ACAGCCGGAGCGCGATGCTCTTACGACAACAGCCCGGAAAACGGTAAAACATACGGCTTTCTCTACAACTGGTATGCCGT CAGCGATCCGAGAGGTCTCGCTCCCGAAGGCTGGCACGTGGCTACTGACAAGGAGTGGCAGGCGCTGGCCGATGCTCTCG GCGGTGAACAGGAGGCCGGTGCTGGCCTGAAAGCTCCTGGAAAATGGGGCAATTCATCCGGAGAAACCCAAAGCAGCGGG TTCAATGCCTTGCCCTCCGGCGCTCGCCGGGATGCCGACGGTGTTTTCCTCATGCTCGGCCAGTTTGCGCGCTTCTGGAC CTCCACGCCGGCCAGTAACGGCAAAGCTCTCGCCCGAGCTTTAGGCTTCTACGACAACGCCCTGCGCGTCGGAGAAGTTG TCCCCAGGAACGGCTTTGCCGTGCGGTGTGTCAAGGATTGA
Upstream 100 bases:
>100_bases TACATTGTCTTCGATAAACTTCGTTAACATTTGTTCTCCCCCTTCGCCATGCTCCAACAGGCAAAATCCGGAGAACGTAT TCAAACAATGGAACCTGACG
Downstream 100 bases:
>100_bases CGAGGCGCACATTTTGCCCATCAGATACCAAAACGGCAACTACTCGCTCTGTTCCATCAACGGTTCTTTTTCTGTCGTCT CCGCTTCAGCGGCGGTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MIKRRICHMFGAMIPLLLATLFMAACNGNTPKRVTDIDGNTYGTVNIGGHVWMAENLRVTRYRNGDPIAEVKEGASWTAQ TAGARCSYDNSPENGKTYGFLYNWYAVSDPRGLAPEGWHVATDKEWQALADALGGEQEAGAGLKAPGKWGNSSGETQSSG FNALPSGARRDADGVFLMLGQFARFWTSTPASNGKALARALGFYDNALRVGEVVPRNGFAVRCVKD
Sequences:
>Translated_226_residues MIKRRICHMFGAMIPLLLATLFMAACNGNTPKRVTDIDGNTYGTVNIGGHVWMAENLRVTRYRNGDPIAEVKEGASWTAQ TAGARCSYDNSPENGKTYGFLYNWYAVSDPRGLAPEGWHVATDKEWQALADALGGEQEAGAGLKAPGKWGNSSGETQSSG FNALPSGARRDADGVFLMLGQFARFWTSTPASNGKALARALGFYDNALRVGEVVPRNGFAVRCVKD >Mature_226_residues MIKRRICHMFGAMIPLLLATLFMAACNGNTPKRVTDIDGNTYGTVNIGGHVWMAENLRVTRYRNGDPIAEVKEGASWTAQ TAGARCSYDNSPENGKTYGFLYNWYAVSDPRGLAPEGWHVATDKEWQALADALGGEQEAGAGLKAPGKWGNSSGETQSSG FNALPSGARRDADGVFLMLGQFARFWTSTPASNGKALARALGFYDNALRVGEVVPRNGFAVRCVKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24372; Mature: 24372
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRRICHMFGAMIPLLLATLFMAACNGNTPKRVTDIDGNTYGTVNIGGHVWMAENLRVT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCEEEEECCEEEE RYRNGDPIAEVKEGASWTAQTAGARCSYDNSPENGKTYGFLYNWYAVSDPRGLAPEGWHV EECCCCCHHHHHCCCCEEHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEE ATDKEWQALADALGGEQEAGAGLKAPGKWGNSSGETQSSGFNALPSGARRDADGVFLMLG CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH QFARFWTSTPASNGKALARALGFYDNALRVGEVVPRNGFAVRCVKD HHHHHHCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCEEEEEECC >Mature Secondary Structure MIKRRICHMFGAMIPLLLATLFMAACNGNTPKRVTDIDGNTYGTVNIGGHVWMAENLRVT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCEEEEECCEEEE RYRNGDPIAEVKEGASWTAQTAGARCSYDNSPENGKTYGFLYNWYAVSDPRGLAPEGWHV EECCCCCHHHHHCCCCEEHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEE ATDKEWQALADALGGEQEAGAGLKAPGKWGNSSGETQSSGFNALPSGARRDADGVFLMLG CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH QFARFWTSTPASNGKALARALGFYDNALRVGEVVPRNGFAVRCVKD HHHHHHCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA