| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is argS [H]
Identifier: 21672856
GI number: 21672856
Start: 13318
End: 14973
Strand: Direct
Name: argS [H]
Synonym: CT0015
Alternate gene names: 21672856
Gene position: 13318-14973 (Clockwise)
Preceding gene: 21672855
Following gene: 21672863
Centisome position: 0.62
GC content: 59.12
Gene sequence:
>1656_bases ATGCGAGCTTTTTTCCTCCCCTTCATTCAGGATGCCCTGCAAAAAGCGGGCATCGAGACCGACAAGGAGATTCAGATCGA CAAGCCGAACGACAAAAAGTTCGGCGACTTCTCGACCAACATCGCCTTCCTTGTGGCCAAGGAGGCCCGGAAAAATCCGC GCGAACTGGCGGGGCAACTCATCGGCCTGCTCGACTTTCCTGAAGGCACGGTGACGAAAACCGAGGTGGCCGGGCCGGGC TTCATCAACTTCCATCTCGCTCCGGCCTTTTTCATGCGCTCGGCGCAGGAGGTGCTCGCAAAGGGCGAGGGGTTCGGCTG CAATGAGTCTGGCAAGGGACTGAAAGCGATTGTCGAGTACGTGAGCGCCAACCCGACTGGGCCGCTTACCATCGGGCGTG GACGCGGCGGCGTCTTGGGCGACTGCATCGCCAACCTGCTCGAAACGCAGGGCTACGAGGTGACGCGCGAGTACTACTTC AACGATGCCGGACGCCAGATGCAGATTCTGGCCGAATCGGTGCGCTACCGCTACCTCGAAAAGTGCGGTCAGGTGATCGA GTTCCCGGAGACGCACTACCAGGGCGACTACATCGGCGAAATCGCCGAGACGCTCTTCATCGAGCACGGCGACGGACTGG CCGCGACCGACGAGTTGACGATCTTCAAGGAAGCCGCCGAGGCAGTCATCTTCAGCTCGATCCGCAAGACGCTCGAACGC CTCTTGATCACGCACGACTCCTTCTTCAACGAGCACACGCTCTACCAGTCCCGCGAGGGGCAGCCGTCGGCGAACCAGCG GGTGATCGACGCGCTCGACGCCAAAGGGTTCATCGGCAACTACGACGGCGCGACCTGGTTCATGACGACCAAGCTGGGGC AGGAGAAGGACAAGGTGCTTATCAAATCTTCCGGCGATCCGAGCTACCGCTTGCCGGACATCGCCTACCACGTCACCAAG TTCGAGCGTGGCTTCGACCTCATGGTGAACGTTTTTGGCGCGGATCACATCGACGAGTATCCCGACGTGCTTGAAGCATT GAAGATTCTTGGCTACGACACCTCGAAGGTCAAGATCGCCATCAACCAGTTCGTCACCACCACGGTCGGTGGCCAGACGG TCAAAATGTCCACCCGCAAGGGCAACGCCGACCTGCTCGACGACCTTATCGATGACGTCGGCGCGGACGCCACACGCCTC TTCTTCATCATGCGCGGCAAGGATTCGCACCTCAACTTCGATGTCGAGCTGGCAAAAAAGCAGTCGAAAGACAACCCGGT TTTCTACCTTCAGTACGCCCACGCGAGGATTTGCAGCCTCGTGCGCATGGCCGAAAAAGAGGTCGGCTTCGACGAGGCGA CGGCTATTGGCGCAGGTTTGCCGCTGCTTTCGAGCGAGCCGGAGATCGACCTGGCTTCCGCATTGCTTGACTTCCCGGAT ATCATCCAGTCAAGCCTCCGCCAGCTCGAACCGCAGAAGATGGTCGAGTACCTGCACACGGTTGCCGAACGATACCACAA GTTCTATCAGGAGTGCCCGATTCTGAAGGCTGATGAACATCTCCGCACCGCTCGTCTCGAACTGTCACTCGCAGTACGTC AGGTGCTGCGCAACGGATTCAAAATCCTCGGCATCTCGGCTCCGGAATCGATGTAA
Upstream 100 bases:
>100_bases CAACGTCATCACGACCATCGACCATTTCGACGGACTCATGCCCGAAGCGTTGCTGGAGCTGAACCGCGCCGTCAAAACCA TGTCTTAACGATTCATACCG
Downstream 100 bases:
>100_bases GTAAGGGAAAATACTTTCGAGCCCTGATCAAGCGCTATACAGCTTGTGCTCGGCGATGTACTGCGCAATCGATGACGGCA CAAACTGTCCAATTGGCTGA
Product: arginyl-tRNA synthetase
Products: NA
Alternate protein names: Arginine--tRNA ligase; ArgRS [H]
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MRAFFLPFIQDALQKAGIETDKEIQIDKPNDKKFGDFSTNIAFLVAKEARKNPRELAGQLIGLLDFPEGTVTKTEVAGPG FINFHLAPAFFMRSAQEVLAKGEGFGCNESGKGLKAIVEYVSANPTGPLTIGRGRGGVLGDCIANLLETQGYEVTREYYF NDAGRQMQILAESVRYRYLEKCGQVIEFPETHYQGDYIGEIAETLFIEHGDGLAATDELTIFKEAAEAVIFSSIRKTLER LLITHDSFFNEHTLYQSREGQPSANQRVIDALDAKGFIGNYDGATWFMTTKLGQEKDKVLIKSSGDPSYRLPDIAYHVTK FERGFDLMVNVFGADHIDEYPDVLEALKILGYDTSKVKIAINQFVTTTVGGQTVKMSTRKGNADLLDDLIDDVGADATRL FFIMRGKDSHLNFDVELAKKQSKDNPVFYLQYAHARICSLVRMAEKEVGFDEATAIGAGLPLLSSEPEIDLASALLDFPD IIQSSLRQLEPQKMVEYLHTVAERYHKFYQECPILKADEHLRTARLELSLAVRQVLRNGFKILGISAPESM
Sequences:
>Translated_551_residues MRAFFLPFIQDALQKAGIETDKEIQIDKPNDKKFGDFSTNIAFLVAKEARKNPRELAGQLIGLLDFPEGTVTKTEVAGPG FINFHLAPAFFMRSAQEVLAKGEGFGCNESGKGLKAIVEYVSANPTGPLTIGRGRGGVLGDCIANLLETQGYEVTREYYF NDAGRQMQILAESVRYRYLEKCGQVIEFPETHYQGDYIGEIAETLFIEHGDGLAATDELTIFKEAAEAVIFSSIRKTLER LLITHDSFFNEHTLYQSREGQPSANQRVIDALDAKGFIGNYDGATWFMTTKLGQEKDKVLIKSSGDPSYRLPDIAYHVTK FERGFDLMVNVFGADHIDEYPDVLEALKILGYDTSKVKIAINQFVTTTVGGQTVKMSTRKGNADLLDDLIDDVGADATRL FFIMRGKDSHLNFDVELAKKQSKDNPVFYLQYAHARICSLVRMAEKEVGFDEATAIGAGLPLLSSEPEIDLASALLDFPD IIQSSLRQLEPQKMVEYLHTVAERYHKFYQECPILKADEHLRTARLELSLAVRQVLRNGFKILGISAPESM >Mature_551_residues MRAFFLPFIQDALQKAGIETDKEIQIDKPNDKKFGDFSTNIAFLVAKEARKNPRELAGQLIGLLDFPEGTVTKTEVAGPG FINFHLAPAFFMRSAQEVLAKGEGFGCNESGKGLKAIVEYVSANPTGPLTIGRGRGGVLGDCIANLLETQGYEVTREYYF NDAGRQMQILAESVRYRYLEKCGQVIEFPETHYQGDYIGEIAETLFIEHGDGLAATDELTIFKEAAEAVIFSSIRKTLER LLITHDSFFNEHTLYQSREGQPSANQRVIDALDAKGFIGNYDGATWFMTTKLGQEKDKVLIKSSGDPSYRLPDIAYHVTK FERGFDLMVNVFGADHIDEYPDVLEALKILGYDTSKVKIAINQFVTTTVGGQTVKMSTRKGNADLLDDLIDDVGADATRL FFIMRGKDSHLNFDVELAKKQSKDNPVFYLQYAHARICSLVRMAEKEVGFDEATAIGAGLPLLSSEPEIDLASALLDFPD IIQSSLRQLEPQKMVEYLHTVAERYHKFYQECPILKADEHLRTARLELSLAVRQVLRNGFKILGISAPESM
Specific function: Unknown
COG id: COG0018
COG function: function code J; Arginyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI15149476, Length=580, Percent_Identity=24.3103448275862, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI197100773, Length=523, Percent_Identity=23.9005736137667, Blast_Score=96, Evalue=1e-19, Organism=Escherichia coli, GI1788184, Length=608, Percent_Identity=27.1381578947368, Blast_Score=145, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6320548, Length=574, Percent_Identity=27.3519163763066, Blast_Score=140, Evalue=5e-34,
Paralogues:
None
Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001278 - InterPro: IPR015945 - InterPro: IPR005148 - InterPro: IPR008909 - InterPro: IPR014729 - InterPro: IPR009080 [H]
Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d [H]
EC number: =6.1.1.19 [H]
Molecular weight: Translated: 61454; Mature: 61454
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAFFLPFIQDALQKAGIETDKEIQIDKPNDKKFGDFSTNIAFLVAKEARKNPRELAGQL CCEEEHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHHH IGLLDFPEGTVTKTEVAGPGFINFHLAPAFFMRSAQEVLAKGEGFGCNESGKGLKAIVEY HHHEECCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH VSANPTGPLTIGRGRGGVLGDCIANLLETQGYEVTREYYFNDAGRQMQILAESVRYRYLE HHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHH KCGQVIEFPETHYQGDYIGEIAETLFIEHGDGLAATDELTIFKEAAEAVIFSSIRKTLER HHHHHHCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLITHDSFFNEHTLYQSREGQPSANQRVIDALDAKGFIGNYDGATWFMTTKLGQEKDKVL HHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEE IKSSGDPSYRLPDIAYHVTKFERGFDLMVNVFGADHIDEYPDVLEALKILGYDTSKVKIA EECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEE INQFVTTTVGGQTVKMSTRKGNADLLDDLIDDVGADATRLFFIMRGKDSHLNFDVELAKK EEHHHHEECCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEHHC QSKDNPVFYLQYAHARICSLVRMAEKEVGFDEATAIGAGLPLLSSEPEIDLASALLDFPD CCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCHH IIQSSLRQLEPQKMVEYLHTVAERYHKFYQECPILKADEHLRTARLELSLAVRQVLRNGF HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC KILGISAPESM EEEEECCCCCC >Mature Secondary Structure MRAFFLPFIQDALQKAGIETDKEIQIDKPNDKKFGDFSTNIAFLVAKEARKNPRELAGQL CCEEEHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHHH IGLLDFPEGTVTKTEVAGPGFINFHLAPAFFMRSAQEVLAKGEGFGCNESGKGLKAIVEY HHHEECCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH VSANPTGPLTIGRGRGGVLGDCIANLLETQGYEVTREYYFNDAGRQMQILAESVRYRYLE HHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHH KCGQVIEFPETHYQGDYIGEIAETLFIEHGDGLAATDELTIFKEAAEAVIFSSIRKTLER HHHHHHCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLITHDSFFNEHTLYQSREGQPSANQRVIDALDAKGFIGNYDGATWFMTTKLGQEKDKVL HHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEE IKSSGDPSYRLPDIAYHVTKFERGFDLMVNVFGADHIDEYPDVLEALKILGYDTSKVKIA EECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEE INQFVTTTVGGQTVKMSTRKGNADLLDDLIDDVGADATRLFFIMRGKDSHLNFDVELAKK EEHHHHEECCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEHHC QSKDNPVFYLQYAHARICSLVRMAEKEVGFDEATAIGAGLPLLSSEPEIDLASALLDFPD CCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCHH IIQSSLRQLEPQKMVEYLHTVAERYHKFYQECPILKADEHLRTARLELSLAVRQVLRNGF HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC KILGISAPESM EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA