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The map label for this gene is yhcW [H]

Identifier: 21672855

GI number: 21672855

Start: 12601

End: 13305

Strand: Direct

Name: yhcW [H]

Synonym: CT0014

Alternate gene names: 21672855

Gene position: 12601-13305 (Clockwise)

Preceding gene: 21672854

Following gene: 21672856

Centisome position: 0.58

GC content: 61.42

Gene sequence:

>705_bases
ATGATGATACAAAACGATACCAAGCCGAAAGCCTTCATTTTCGACATGGACGGCGTGCTGGTCGATAACATGAGAATGCA
CGCACAGTCGTGGGTCGATCTGTTTGCCGACTACGGCCTTTCGGGCCTCGATCCGGAGCGCTACCTTGTTGAAACCGCCG
GAATGAAGGGCCTCGATGTCTTGCGCTACTTTCTCGATCCGTCTATTTCGCCCGAAAAGGCTGACAGGCTTACCGAGCTG
AAGGACATTCTCTACCGCGTGATGAACCGCAACGCCATCGTTGCCATGCCGGGCCTCGAAACGTTCCTCGACCGCGCGGC
AAACGCCGGCATCCGGCTCGGCATCGGCACGGGCGCGGGGCCGAAGAACATCGACTACGTGCTCGGTCTTACCGGCCTGA
CGTCACGCTTCGAGGTGGTGGTCGGAGCGCACATGGTCAGGCACGGCAAGCCCCATCCGGAGACCTTCCTGCAGGTCGCC
GAACGGCTCGGCGCTGATCCGGCGTCGTGCATCGTCTTCGAGGACGCCCTGCCCGGCGCGGAAGCCGCCGCCGCAGCTGG
AATGAGCTGCGTGGCAGTCACGACGACCAACCGGCCCGAGGCGTTCGCCGCGTTCGACAACGTCATCACGACCATCGACC
ATTTCGACGGACTCATGCCCGAAGCGTTGCTGGAGCTGAACCGCGCCGTCAAAACCATGTCTTAA

Upstream 100 bases:

>100_bases
TCAAAGAGATTCTGTACGAAGGTGAATCCAAAGCGAGAAAGATTGCCGGAGAAACCATGAAAGAGGTCAGAGAGGCGATG
AGCCTCGGGGAGAGCAACGC

Downstream 100 bases:

>100_bases
CGATTCATACCGATGCGAGCTTTTTTCCTCCCCTTCATTCAGGATGCCCTGCAAAAAGCGGGCATCGAGACCGACAAGGA
GATTCAGATCGACAAGCCGA

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MMIQNDTKPKAFIFDMDGVLVDNMRMHAQSWVDLFADYGLSGLDPERYLVETAGMKGLDVLRYFLDPSISPEKADRLTEL
KDILYRVMNRNAIVAMPGLETFLDRAANAGIRLGIGTGAGPKNIDYVLGLTGLTSRFEVVVGAHMVRHGKPHPETFLQVA
ERLGADPASCIVFEDALPGAEAAAAAGMSCVAVTTTNRPEAFAAFDNVITTIDHFDGLMPEALLELNRAVKTMS

Sequences:

>Translated_234_residues
MMIQNDTKPKAFIFDMDGVLVDNMRMHAQSWVDLFADYGLSGLDPERYLVETAGMKGLDVLRYFLDPSISPEKADRLTEL
KDILYRVMNRNAIVAMPGLETFLDRAANAGIRLGIGTGAGPKNIDYVLGLTGLTSRFEVVVGAHMVRHGKPHPETFLQVA
ERLGADPASCIVFEDALPGAEAAAAAGMSCVAVTTTNRPEAFAAFDNVITTIDHFDGLMPEALLELNRAVKTMS
>Mature_234_residues
MMIQNDTKPKAFIFDMDGVLVDNMRMHAQSWVDLFADYGLSGLDPERYLVETAGMKGLDVLRYFLDPSISPEKADRLTEL
KDILYRVMNRNAIVAMPGLETFLDRAANAGIRLGIGTGAGPKNIDYVLGLTGLTSRFEVVVGAHMVRHGKPHPETFLQVA
ERLGADPASCIVFEDALPGAEAAAAAGMSCVAVTTTNRPEAFAAFDNVITTIDHFDGLMPEALLELNRAVKTMS

Specific function: Unknown

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Homo sapiens, GI197382691, Length=197, Percent_Identity=31.9796954314721, Blast_Score=76, Evalue=2e-14,
Organism=Escherichia coli, GI1789046, Length=182, Percent_Identity=30.7692307692308, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87082080, Length=184, Percent_Identity=32.6086956521739, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1788021, Length=200, Percent_Identity=27, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787576, Length=196, Percent_Identity=29.0816326530612, Blast_Score=76, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17554716, Length=216, Percent_Identity=28.2407407407407, Blast_Score=75, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 25420; Mature: 25420

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIQNDTKPKAFIFDMDGVLVDNMRMHAQSWVDLFADYGLSGLDPERYLVETAGMKGLDV
CCCCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHH
LRYFLDPSISPEKADRLTELKDILYRVMNRNAIVAMPGLETFLDRAANAGIRLGIGTGAG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCEEEEECCCCC
PKNIDYVLGLTGLTSRFEVVVGAHMVRHGKPHPETFLQVAERLGADPASCIVFEDALPGA
CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCH
EAAAAAGMSCVAVTTTNRPEAFAAFDNVITTIDHFDGLMPEALLELNRAVKTMS
HHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMIQNDTKPKAFIFDMDGVLVDNMRMHAQSWVDLFADYGLSGLDPERYLVETAGMKGLDV
CCCCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHH
LRYFLDPSISPEKADRLTELKDILYRVMNRNAIVAMPGLETFLDRAANAGIRLGIGTGAG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCEEEEECCCCC
PKNIDYVLGLTGLTSRFEVVVGAHMVRHGKPHPETFLQVAERLGADPASCIVFEDALPGA
CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCH
EAAAAAGMSCVAVTTTNRPEAFAAFDNVITTIDHFDGLMPEALLELNRAVKTMS
HHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]