| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
Click here to switch to the map view.
The map label for this gene is folD
Identifier: 21672735
GI number: 21672735
Start: 536830
End: 537687
Strand: Direct
Name: folD
Synonym: BUsg470
Alternate gene names: 21672735
Gene position: 536830-537687 (Clockwise)
Preceding gene: 21672734
Following gene: 21672737
Centisome position: 83.69
GC content: 29.14
Gene sequence:
>858_bases ATGTCTGCAATAATTATAGATGGCATCAAAATTGCAAAAAAAATAGAATTAAATCTTTTAAAAAAGATAGAAGAAAGGGA AAAAAATAAAAAAAGGATACCAGGATTGGCAGTAATTTTAATAGGAAAAAATCCTGCTTCTGAAATTTATGTAAAAAGAA AAATATCAGTATGTAAAAAAGTTGGATTTATTTCTAAATATTGGAGTTTTCCTATAAATGTTGATGAAAAAGATATATTG AATCTTATCGAAAAATTAAACAACAACATTAATATAGACGGTATTTTAGTACAGTTACCTATACCTAAGCAAATAAATTA TTATAAAATATTTAGTAGTATCAGACCTGATAAAGATGTAGATGGTTTTCATCCTTACAATACAGGCTCTTTATGTCAAA GAAATCCTACTTTAAGAGCTTGTACACCTAAGGGGATCATCACAATGTTAAACTATACAAAAATTAAAACTCATGGACTA AATGCTGTGATGGTTGGAGCTTCTAACATAGTAGGTAGACCTATGAGTATGGAACTATTATTAGCTGGATGTACAACTAC AGTGACACATAGATTTACTAAAAACTTAAGACATCATATTAAAAACGCTGATCTTTTAGTAGTTGCAATTGGAAAACCAA ATTTTCTACATGGAGATTGGATAAAAGAAGGTGCTATAGTAATAGATGTAGGTATTAATAAATTGAAAGATGGATCTATA GTAGGTGATGTAGATTTTAAATCAGCATCTCTAAAAGCTGCTTATATCACTCCAGTACCAGGGGGGGTTGGTCCAATCAC AGTTATAACGTTGTTAGAAAATACTTTAGAGGCCTGTGAAAAATATCATGAATTTTAA
Upstream 100 bases:
>100_bases CAACTAAATTAATATGAATATTCTATATATTAATATAAAAAAAATTATATCAAAAATTAAAATGATTTTTCACTAAAAAA AATAACTGAGCTACGAAATA
Downstream 100 bases:
>100_bases ATGCAATAAATAAATATGTTATCGTTTAAAACGCCATAAGGTTTTTTCAGGCAAATCTTCTAAGATAACATTTAATTTTA TTAATTTATCACGTAATTTA
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSAIIIDGIKIAKKIELNLLKKIEEREKNKKRIPGLAVILIGKNPASEIYVKRKISVCKKVGFISKYWSFPINVDEKDIL NLIEKLNNNINIDGILVQLPIPKQINYYKIFSSIRPDKDVDGFHPYNTGSLCQRNPTLRACTPKGIITMLNYTKIKTHGL NAVMVGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHIKNADLLVVAIGKPNFLHGDWIKEGAIVIDVGINKLKDGSI VGDVDFKSASLKAAYITPVPGGVGPITVITLLENTLEACEKYHEF
Sequences:
>Translated_285_residues MSAIIIDGIKIAKKIELNLLKKIEEREKNKKRIPGLAVILIGKNPASEIYVKRKISVCKKVGFISKYWSFPINVDEKDIL NLIEKLNNNINIDGILVQLPIPKQINYYKIFSSIRPDKDVDGFHPYNTGSLCQRNPTLRACTPKGIITMLNYTKIKTHGL NAVMVGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHIKNADLLVVAIGKPNFLHGDWIKEGAIVIDVGINKLKDGSI VGDVDFKSASLKAAYITPVPGGVGPITVITLLENTLEACEKYHEF >Mature_284_residues SAIIIDGIKIAKKIELNLLKKIEEREKNKKRIPGLAVILIGKNPASEIYVKRKISVCKKVGFISKYWSFPINVDEKDILN LIEKLNNNINIDGILVQLPIPKQINYYKIFSSIRPDKDVDGFHPYNTGSLCQRNPTLRACTPKGIITMLNYTKIKTHGLN AVMVGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHIKNADLLVVAIGKPNFLHGDWIKEGAIVIDVGINKLKDGSIV GDVDFKSASLKAAYITPVPGGVGPITVITLLENTLEACEKYHEF
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI222418558, Length=294, Percent_Identity=41.4965986394558, Blast_Score=215, Evalue=3e-56, Organism=Homo sapiens, GI94721354, Length=294, Percent_Identity=43.1972789115646, Blast_Score=214, Evalue=7e-56, Organism=Homo sapiens, GI222136639, Length=293, Percent_Identity=36.1774744027304, Blast_Score=191, Evalue=5e-49, Organism=Homo sapiens, GI36796743, Length=207, Percent_Identity=25.1207729468599, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1786741, Length=284, Percent_Identity=62.6760563380282, Blast_Score=386, Evalue=1e-109, Organism=Caenorhabditis elegans, GI17568735, Length=292, Percent_Identity=35.958904109589, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6319558, Length=286, Percent_Identity=39.1608391608392, Blast_Score=201, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6321643, Length=301, Percent_Identity=35.8803986710963, Blast_Score=195, Evalue=9e-51, Organism=Drosophila melanogaster, GI17136818, Length=294, Percent_Identity=41.8367346938776, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI17136816, Length=294, Percent_Identity=41.8367346938776, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI62472483, Length=292, Percent_Identity=36.3013698630137, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI45551871, Length=292, Percent_Identity=36.3013698630137, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI24645718, Length=292, Percent_Identity=36.3013698630137, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI17137370, Length=292, Percent_Identity=36.3013698630137, Blast_Score=189, Evalue=2e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_BUCAP (Q8K979)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660802.1 - ProteinModelPortal: Q8K979 - SMR: Q8K979 - EnsemblBacteria: EBBUCT00000000315 - GeneID: 1005697 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg470 - GeneTree: EBGT00050000007792 - HOGENOM: HBG328751 - OMA: DVVYETA - ProtClustDB: PRK10792 - BioCyc: BAPH198804:BUSG470-MONOMER - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 31610; Mature: 31479
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIIIDGIKIAKKIELNLLKKIEEREKNKKRIPGLAVILIGKNPASEIYVKRKISVCKK CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH VGFISKYWSFPINVDEKDILNLIEKLNNNINIDGILVQLPIPKQINYYKIFSSIRPDKDV HCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCC DGFHPYNTGSLCQRNPTLRACTPKGIITMLNYTKIKTHGLNAVMVGASNIVGRPMSMELL CCCCCCCCCCHHCCCCCEEEECCCCEEEEEEEEEEEECCCCEEEEECHHHCCCCCEEEEE LAGCTTTVTHRFTKNLRHHIKNADLLVVAIGKPNFLHGDWIKEGAIVIDVGINKLKDGSI EECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHCCCCEEEEECCCCCCCCCE VGDVDFKSASLKAAYITPVPGGVGPITVITLLENTLEACEKYHEF EECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAIIIDGIKIAKKIELNLLKKIEEREKNKKRIPGLAVILIGKNPASEIYVKRKISVCKK CEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH VGFISKYWSFPINVDEKDILNLIEKLNNNINIDGILVQLPIPKQINYYKIFSSIRPDKDV HCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCC DGFHPYNTGSLCQRNPTLRACTPKGIITMLNYTKIKTHGLNAVMVGASNIVGRPMSMELL CCCCCCCCCCHHCCCCCEEEECCCCEEEEEEEEEEEECCCCEEEEECHHHCCCCCEEEEE LAGCTTTVTHRFTKNLRHHIKNADLLVVAIGKPNFLHGDWIKEGAIVIDVGINKLKDGSI EECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHCCCCEEEEECCCCCCCCCE VGDVDFKSASLKAAYITPVPGGVGPITVITLLENTLEACEKYHEF EECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438