| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
Click here to switch to the map view.
The map label for this gene is fba
Identifier: 21672701
GI number: 21672701
Start: 493144
End: 494223
Strand: Direct
Name: fba
Synonym: BUsg436
Alternate gene names: 21672701
Gene position: 493144-494223 (Clockwise)
Preceding gene: 21672700
Following gene: 21672702
Centisome position: 76.88
GC content: 27.69
Gene sequence:
>1080_bases ATGAAAATATTAAATCTTATTCAACCTGGAGTTGTAACAGGTAATGAATGTCAGATAATATTCGAATTAGCTAAAAAAAA GAAATTTGCAATACCGGCTGTTAATTGTATAGGTACGGATTCAATAAATGCAGTCTTAGAAACTGCTTCTAGGGTAAAGT CTCCAGTTATTATACAATTTTCTTATGGAGGCGCTTCTTTTATTGCAGGTTATAAGAGAACATCTTCAAAAAATCCAGAA GATCAGGCTATTCAAGGATCTATATCAGGTGCTCAACACGTACATTTAATGTCACAATACTATCAAATACCTGTAATACT TCATACAGACCACTGTTCTAAGGAAATGTTACCATGGATTGATGGATTACTAGAAGAAGGTAAAAAACACTATAAAAATT TTGGAAAACCTCTTTTCACTTCTCATATGATTGATTTATCAAAAGAACATTTAAAAGAAAATATTGCCATTTGCAGCAAT TATTTAAAAAAAATTAAAAAAATAAATATGATTTTAGAAATTGAATTAGGATGCACAGGAGGAGAAGAAGACGGTATAGA TAACAGTAACATAGATAAAAAACTACTTTATACACAACCTAAAGATGTTAATTATGCATATAAAAAATTAAGTAAAATTA GCACAAATTTTACCATTGCAGCTTCATTTGGAAATGTACATGGCGTATATCAACCTGGAAATGTTAATCTTAAACCAAAT ATTCTAAAAGAATCTCAGGAATATGTAAGTACTAAACATAATTTAAAAAAGCTTCCATTAAATTTAGTATTTCATGGTGG TTCAGGTTCAGATTTAAAAGAAATACATGAATCTATTGAATACGGTATAGTAAAAATGAATATTGACACCGATATACAGT GGGCAAGTTGGAAAGGAGTTTTCAATTTTTATAAAAAAAATAAAGACTTCTTACAAAAACAAATAGGAAATAAAAATGGT AAAAACATACCTAATAAAAAATATTATGATCCTAGATCATGGATAAGAGAATCTCAAGAATCAATGTCTAAAAGATTAGA AAAAACATTTAAGGATCTTAATGCTTTTAATATTTTATAA
Upstream 100 bases:
>100_bases GGGAAAAAATTACCTGCCATGAAAATGTTAGAAGAAAATTTTCACAAATAAGTTTTAAACAATTCATTGTAATAAAAAAT TCAATATAGCAGGAAAAAAA
Downstream 100 bases:
>100_bases AAAAAAATAAAGAAATTTTATATTTAAGTCCGGGGAATAAATAAAAATATTCTCCGAAATTTTTTAAAACATCTATCTTA TATAATCTATAAAAATGTTT
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; Fructose-bisphosphate aldolase class II
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MKILNLIQPGVVTGNECQIIFELAKKKKFAIPAVNCIGTDSINAVLETASRVKSPVIIQFSYGGASFIAGYKRTSSKNPE DQAIQGSISGAQHVHLMSQYYQIPVILHTDHCSKEMLPWIDGLLEEGKKHYKNFGKPLFTSHMIDLSKEHLKENIAICSN YLKKIKKINMILEIELGCTGGEEDGIDNSNIDKKLLYTQPKDVNYAYKKLSKISTNFTIAASFGNVHGVYQPGNVNLKPN ILKESQEYVSTKHNLKKLPLNLVFHGGSGSDLKEIHESIEYGIVKMNIDTDIQWASWKGVFNFYKKNKDFLQKQIGNKNG KNIPNKKYYDPRSWIRESQESMSKRLEKTFKDLNAFNIL
Sequences:
>Translated_359_residues MKILNLIQPGVVTGNECQIIFELAKKKKFAIPAVNCIGTDSINAVLETASRVKSPVIIQFSYGGASFIAGYKRTSSKNPE DQAIQGSISGAQHVHLMSQYYQIPVILHTDHCSKEMLPWIDGLLEEGKKHYKNFGKPLFTSHMIDLSKEHLKENIAICSN YLKKIKKINMILEIELGCTGGEEDGIDNSNIDKKLLYTQPKDVNYAYKKLSKISTNFTIAASFGNVHGVYQPGNVNLKPN ILKESQEYVSTKHNLKKLPLNLVFHGGSGSDLKEIHESIEYGIVKMNIDTDIQWASWKGVFNFYKKNKDFLQKQIGNKNG KNIPNKKYYDPRSWIRESQESMSKRLEKTFKDLNAFNIL >Mature_359_residues MKILNLIQPGVVTGNECQIIFELAKKKKFAIPAVNCIGTDSINAVLETASRVKSPVIIQFSYGGASFIAGYKRTSSKNPE DQAIQGSISGAQHVHLMSQYYQIPVILHTDHCSKEMLPWIDGLLEEGKKHYKNFGKPLFTSHMIDLSKEHLKENIAICSN YLKKIKKINMILEIELGCTGGEEDGIDNSNIDKKLLYTQPKDVNYAYKKLSKISTNFTIAASFGNVHGVYQPGNVNLKPN ILKESQEYVSTKHNLKKLPLNLVFHGGSGSDLKEIHESIEYGIVKMNIDTDIQWASWKGVFNFYKKNKDFLQKQIGNKNG KNIPNKKYYDPRSWIRESQESMSKRLEKTFKDLNAFNIL
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family
Homologues:
Organism=Escherichia coli, GI1789293, Length=358, Percent_Identity=65.3631284916201, Blast_Score=515, Evalue=1e-147, Organism=Escherichia coli, GI87082041, Length=329, Percent_Identity=23.1003039513678, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI1788072, Length=292, Percent_Identity=26.3698630136986, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322790, Length=351, Percent_Identity=44.4444444444444, Blast_Score=334, Evalue=1e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ALF_BUCAP (Q8K9B2)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660768.1 - ProteinModelPortal: Q8K9B2 - SMR: Q8K9B2 - EnsemblBacteria: EBBUCT00000000090 - GeneID: 1005729 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg436 - GeneTree: EBGT00050000007896 - HOGENOM: HBG327581 - OMA: RSAQTSM - ProtClustDB: PRK09197 - BioCyc: BAPH198804:BUSG436-MONOMER - GO: GO:0006096 - InterPro: IPR013785 - InterPro: IPR006411 - InterPro: IPR000771 - Gene3D: G3DSA:3.20.20.70 - PIRSF: PIRSF001359 - TIGRFAMs: TIGR00167 - TIGRFAMs: TIGR01520
Pfam domain/function: PF01116 F_bP_aldolase
EC number: =4.1.2.13
Molecular weight: Translated: 40638; Mature: 40638
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS00602 ALDOLASE_CLASS_II_1; PS00806 ALDOLASE_CLASS_II_2
Important sites: ACT_SITE 110-110 BINDING 61-61 BINDING 228-228
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILNLIQPGVVTGNECQIIFELAKKKKFAIPAVNCIGTDSINAVLETASRVKSPVIIQF CCCHHHCCCCCEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE SYGGASFIAGYKRTSSKNPEDQAIQGSISGAQHVHLMSQYYQIPVILHTDHCSKEMLPWI ECCCHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHH DGLLEEGKKHYKNFGKPLFTSHMIDLSKEHLKENIAICSNYLKKIKKINMILEIELGCTG HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC GEEDGIDNSNIDKKLLYTQPKDVNYAYKKLSKISTNFTIAASFGNVHGVYQPGNVNLKPN CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCEECCCCCCCCCH ILKESQEYVSTKHNLKKLPLNLVFHGGSGSDLKEIHESIEYGIVKMNIDTDIQWASWKGV HHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCEEEEECCCCCEEHHHHHH FNFYKKNKDFLQKQIGNKNGKNIPNKKYYDPRSWIRESQESMSKRLEKTFKDLNAFNIL HHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKILNLIQPGVVTGNECQIIFELAKKKKFAIPAVNCIGTDSINAVLETASRVKSPVIIQF CCCHHHCCCCCEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE SYGGASFIAGYKRTSSKNPEDQAIQGSISGAQHVHLMSQYYQIPVILHTDHCSKEMLPWI ECCCHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHH DGLLEEGKKHYKNFGKPLFTSHMIDLSKEHLKENIAICSNYLKKIKKINMILEIELGCTG HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC GEEDGIDNSNIDKKLLYTQPKDVNYAYKKLSKISTNFTIAASFGNVHGVYQPGNVNLKPN CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCEECCCCCCCCCH ILKESQEYVSTKHNLKKLPLNLVFHGGSGSDLKEIHESIEYGIVKMNIDTDIQWASWKGV HHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCEEEEECCCCCEEHHHHHH FNFYKKNKDFLQKQIGNKNGKNIPNKKYYDPRSWIRESQESMSKRLEKTFKDLNAFNIL HHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438