| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is pgk
Identifier: 21672700
GI number: 21672700
Start: 491928
End: 493094
Strand: Direct
Name: pgk
Synonym: BUsg435
Alternate gene names: 21672700
Gene position: 491928-493094 (Clockwise)
Preceding gene: 21672699
Following gene: 21672701
Centisome position: 76.69
GC content: 26.99
Gene sequence:
>1167_bases ATGAATTTAAGAAAAATGACTGAATTAAATATAACAGGAAAAAAAATTTTAATAAGAACAGATTTAAATGTTCCTATAAA AAATGGCGTGATTCAATCTGATGCAAGAATACTTGCTGCTCTTCCTACCATTGAAATAGCTATTGAAAAAAAAGCTAAAA TAATTATTTTATCTCATTTAGGACGTCCAAAAGAAGGGTGCTATACAAAAAAATATTCTTTATTTCCTATTTTTGAGTAT CTAAAAAAGAAATTAAAAAAAACAAAAATTTACTTTTCTGATAATCACTTAAAAAAAGTTGAAATAAATTCAGGAGAAAT ATTAATTTTAGAAAATGTTCGTTTTAACGTGGGAGAATTAAAAAACGATGAAAATTTATCTAAAGAATATGCTAATTTAT GCGATATTTTTGTTATGGATGCTTTTGGTAGTGCACATAGAATGCAATCTTCAACATATGGCATTGGAAAATTTGTTAAA ATTGCATGTGCAGGACCTCTTTTAATATCTGAAATTAACAACTTAAAAAAAGCGTTAAAAAATCCGAAACGTCCTATGGT CGCTATAGTAGGAGGTGCAAAGGTATCAACCAAATTTAATGTGTTAAATAAATTAGCTGCAATTTCAGATACAATCATTG TTGGAGGAGGTATAGCTAATACATTTTTAGCTATTGATAATAAAATTGGAAAATCGTTACATGAACCGAAATTTATACTA AAAGCTAAAAAGTTACGTGATAAATACAACAACATTGTGATACCAATCGATTCTCGTGTAGGAAAAAACTTTTCTCATAA AGAAAAATGCACAATAAAATTATCTTCTAATATTGAAAAAAACGAAGAAATCATGGATTTAGGTGATAAAACAATAAAAA AAATTATCAAAATACTTAAAAAATCAAAAACAATTCTTTGGAATGGACCTGTTGGTGTTTTTGAGTTTCCTAATTTTCGT AAAGGAACTGAAATGATTGCAAAAGCAATTGCAGAAAATAATGGATTTTCAATAGCTGGCGGTGGAGATACACTATCTGT TATTGATATGTTTCAAATAAAAGATAAAATTTCTTATATTTCAACAGGAGGAGGAGCATTTTTAGAATTCATAGAAGGGA AAAAATTACCTGCCATGAAAATGTTAGAAGAAAATTTTCACAAATAA
Upstream 100 bases:
>100_bases ATTAATGGGTCTTATATTAATAATGCTTTCTACACAAATGTTTCTTGATGGAATAAAAGCATGGTTTAAAAATTAAAAAT TATTAAATAAGGATGATTAT
Downstream 100 bases:
>100_bases GTTTTAAACAATTCATTGTAATAAAAAATTCAATATAGCAGGAAAAAAAATGAAAATATTAAATCTTATTCAACCTGGAG TTGTAACAGGTAATGAATGT
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MNLRKMTELNITGKKILIRTDLNVPIKNGVIQSDARILAALPTIEIAIEKKAKIIILSHLGRPKEGCYTKKYSLFPIFEY LKKKLKKTKIYFSDNHLKKVEINSGEILILENVRFNVGELKNDENLSKEYANLCDIFVMDAFGSAHRMQSSTYGIGKFVK IACAGPLLISEINNLKKALKNPKRPMVAIVGGAKVSTKFNVLNKLAAISDTIIVGGGIANTFLAIDNKIGKSLHEPKFIL KAKKLRDKYNNIVIPIDSRVGKNFSHKEKCTIKLSSNIEKNEEIMDLGDKTIKKIIKILKKSKTILWNGPVGVFEFPNFR KGTEMIAKAIAENNGFSIAGGGDTLSVIDMFQIKDKISYISTGGGAFLEFIEGKKLPAMKMLEENFHK
Sequences:
>Translated_388_residues MNLRKMTELNITGKKILIRTDLNVPIKNGVIQSDARILAALPTIEIAIEKKAKIIILSHLGRPKEGCYTKKYSLFPIFEY LKKKLKKTKIYFSDNHLKKVEINSGEILILENVRFNVGELKNDENLSKEYANLCDIFVMDAFGSAHRMQSSTYGIGKFVK IACAGPLLISEINNLKKALKNPKRPMVAIVGGAKVSTKFNVLNKLAAISDTIIVGGGIANTFLAIDNKIGKSLHEPKFIL KAKKLRDKYNNIVIPIDSRVGKNFSHKEKCTIKLSSNIEKNEEIMDLGDKTIKKIIKILKKSKTILWNGPVGVFEFPNFR KGTEMIAKAIAENNGFSIAGGGDTLSVIDMFQIKDKISYISTGGGAFLEFIEGKKLPAMKMLEENFHK >Mature_388_residues MNLRKMTELNITGKKILIRTDLNVPIKNGVIQSDARILAALPTIEIAIEKKAKIIILSHLGRPKEGCYTKKYSLFPIFEY LKKKLKKTKIYFSDNHLKKVEINSGEILILENVRFNVGELKNDENLSKEYANLCDIFVMDAFGSAHRMQSSTYGIGKFVK IACAGPLLISEINNLKKALKNPKRPMVAIVGGAKVSTKFNVLNKLAAISDTIIVGGGIANTFLAIDNKIGKSLHEPKFIL KAKKLRDKYNNIVIPIDSRVGKNFSHKEKCTIKLSSNIEKNEEIMDLGDKTIKKIIKILKKSKTILWNGPVGVFEFPNFR KGTEMIAKAIAENNGFSIAGGGDTLSVIDMFQIKDKISYISTGGGAFLEFIEGKKLPAMKMLEENFHK
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family
Homologues:
Organism=Homo sapiens, GI4505763, Length=408, Percent_Identity=35.5392156862745, Blast_Score=228, Evalue=5e-60, Organism=Homo sapiens, GI31543397, Length=416, Percent_Identity=34.375, Blast_Score=218, Evalue=7e-57, Organism=Escherichia coli, GI1789294, Length=389, Percent_Identity=58.0976863753213, Blast_Score=478, Evalue=1e-136, Organism=Caenorhabditis elegans, GI17508823, Length=416, Percent_Identity=37.0192307692308, Blast_Score=244, Evalue=8e-65, Organism=Saccharomyces cerevisiae, GI6319857, Length=412, Percent_Identity=36.8932038834951, Blast_Score=235, Evalue=1e-62, Organism=Drosophila melanogaster, GI17136394, Length=410, Percent_Identity=40, Blast_Score=241, Evalue=5e-64, Organism=Drosophila melanogaster, GI24581203, Length=411, Percent_Identity=36.9829683698297, Blast_Score=219, Evalue=3e-57,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): PGK_BUCAP (Q8K9B3)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660767.1 - ProteinModelPortal: Q8K9B3 - SMR: Q8K9B3 - EnsemblBacteria: EBBUCT00000000520 - GeneID: 1005730 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg435 - GeneTree: EBGT00050000007969 - HOGENOM: HBG453500 - OMA: DCIGDEV - ProtClustDB: PRK00073 - BioCyc: BAPH198804:BUSG435-MONOMER - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_00145 - InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015824 - Gene3D: G3DSA:3.40.50.1270 - Gene3D: G3DSA:3.40.50.1260 - PANTHER: PTHR11406 - PIRSF: PIRSF000724 - PRINTS: PR00477
Pfam domain/function: PF00162 PGK; SSF53748 PGK
EC number: =2.7.2.3
Molecular weight: Translated: 43248; Mature: 43248
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: BINDING 36-36 BINDING 114-114 BINDING 147-147 BINDING 198-198 BINDING 315-315
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRKMTELNITGKKILIRTDLNVPIKNGVIQSDARILAALPTIEIAIEKKAKIIILSHL CCCCCCEEEECCCCEEEEEECCCCCCCCCEECCCCEEEEECCEEEEEEECCCEEEEEECC GRPKEGCYTKKYSLFPIFEYLKKKLKKTKIYFSDNHLKKVEINSGEILILENVRFNVGEL CCCCCCCEECCCCHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCCEEEEECCCCCCCCC KNDENLSKEYANLCDIFVMDAFGSAHRMQSSTYGIGKFVKIACAGPLLISEINNLKKALK CCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHC NPKRPMVAIVGGAKVSTKFNVLNKLAAISDTIIVGGGIANTFLAIDNKIGKSLHEPKFIL CCCCCEEEEECCCEECHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHH KAKKLRDKYNNIVIPIDSRVGKNFSHKEKCTIKLSSNIEKNEEIMDLGDKTIKKIIKILK HHHHHHHHHCCEEEEECHHHCCCCCCCCEEEEEECCCCCCCHHHHHCCHHHHHHHHHHHH KSKTILWNGPVGVFEFPNFRKGTEMIAKAIAENNGFSIAGGGDTLSVIDMFQIKDKISYI CCCEEEEECCCCEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHEE STGGGAFLEFIEGKKLPAMKMLEENFHK ECCCHHHHHHHCCCCCCHHHHHHHHCCC >Mature Secondary Structure MNLRKMTELNITGKKILIRTDLNVPIKNGVIQSDARILAALPTIEIAIEKKAKIIILSHL CCCCCCEEEECCCCEEEEEECCCCCCCCCEECCCCEEEEECCEEEEEEECCCEEEEEECC GRPKEGCYTKKYSLFPIFEYLKKKLKKTKIYFSDNHLKKVEINSGEILILENVRFNVGEL CCCCCCCEECCCCHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCCEEEEECCCCCCCCC KNDENLSKEYANLCDIFVMDAFGSAHRMQSSTYGIGKFVKIACAGPLLISEINNLKKALK CCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHC NPKRPMVAIVGGAKVSTKFNVLNKLAAISDTIIVGGGIANTFLAIDNKIGKSLHEPKFIL CCCCCEEEEECCCEECHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHH KAKKLRDKYNNIVIPIDSRVGKNFSHKEKCTIKLSSNIEKNEEIMDLGDKTIKKIIKILK HHHHHHHHHCCEEEEECHHHCCCCCCCCEEEEEECCCCCCCHHHHHCCHHHHHHHHHHHH KSKTILWNGPVGVFEFPNFRKGTEMIAKAIAENNGFSIAGGGDTLSVIDMFQIKDKISYI CCCEEEEECCCCEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHEE STGGGAFLEFIEGKKLPAMKMLEENFHK ECCCHHHHHHHCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438