Definition Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome.
Accession NC_004061
Length 641,454

Click here to switch to the map view.

The map label for this gene is yhgN [C]

Identifier: 21672699

GI number: 21672699

Start: 491313

End: 491903

Strand: Direct

Name: yhgN [C]

Synonym: BUsg434

Alternate gene names: 21672699

Gene position: 491313-491903 (Clockwise)

Preceding gene: 21672697

Following gene: 21672700

Centisome position: 76.59

GC content: 27.58

Gene sequence:

>591_bases
ATGAATGAAATAATCTCTACAACTATATTACTAATTTTAATAATGGATCCCTTAGGGAACCTTCCAATTTTTATGACCAT
ACTAAAAAAATTAGATGCAAAAAGGAGAAGAATAGTAGTTATACGTGAAATGATTATAGCTCTGATTGTGATGTTAATAT
TTTTATTTGTCGGAGAAAAAATACTTACTATTCTTAATTTAAAAACTGAAACAGTTTCTATATCTGGAGGAATTATTTTA
TTTCTTATTGCTATTAAAATGATTTTTCCATCCGATGAAGGTAACAATGGAACTTCTTCAGAAGAAGAACCATTTTTAGT
TCCATTAGCCATCCCATTAGTTGCAGGACCTTCTTTATTGGCTACATTAATGTTGTTATCTCATCAGTATTTACATCATA
TGCCTTATTTAGTGGGATCATTACTGATTGCATGGTTTTTTACAATCATAATATTGTTATTATCTGGTTTATTTTTAAAA
TTATTTGGTGATAAGGGTGTAAATGCATTAGAACGATTAATGGGTCTTATATTAATAATGCTTTCTACACAAATGTTTCT
TGATGGAATAAAAGCATGGTTTAAAAATTAA

Upstream 100 bases:

>100_bases
TAATATTAATATGTTTATATTAAATAAAAAATTTTAGTGTTTTATTCAAATTACATATCGTGAAAAACTTTACATTTCTA
AAAGGACATAATAAATTAAA

Downstream 100 bases:

>100_bases
AAATTATTAAATAAGGATGATTATATGAATTTAAGAAAAATGACTGAATTAAATATAACAGGAAAAAAAATTTTAATAAG
AACAGATTTAAATGTTCCTA

Product: putative dITP- and XTP- hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MNEIISTTILLILIMDPLGNLPIFMTILKKLDAKRRRIVVIREMIIALIVMLIFLFVGEKILTILNLKTETVSISGGIIL
FLIAIKMIFPSDEGNNGTSSEEEPFLVPLAIPLVAGPSLLATLMLLSHQYLHHMPYLVGSLLIAWFFTIIILLLSGLFLK
LFGDKGVNALERLMGLILIMLSTQMFLDGIKAWFKN

Sequences:

>Translated_196_residues
MNEIISTTILLILIMDPLGNLPIFMTILKKLDAKRRRIVVIREMIIALIVMLIFLFVGEKILTILNLKTETVSISGGIIL
FLIAIKMIFPSDEGNNGTSSEEEPFLVPLAIPLVAGPSLLATLMLLSHQYLHHMPYLVGSLLIAWFFTIIILLLSGLFLK
LFGDKGVNALERLMGLILIMLSTQMFLDGIKAWFKN
>Mature_196_residues
MNEIISTTILLILIMDPLGNLPIFMTILKKLDAKRRRIVVIREMIIALIVMLIFLFVGEKILTILNLKTETVSISGGIIL
FLIAIKMIFPSDEGNNGTSSEEEPFLVPLAIPLVAGPSLLATLMLLSHQYLHHMPYLVGSLLIAWFFTIIILLLSGLFLK
LFGDKGVNALERLMGLILIMLSTQMFLDGIKAWFKN

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family

Homologues:

Organism=Escherichia coli, GI1789842, Length=197, Percent_Identity=70.5583756345178, Blast_Score=274, Evalue=3e-75,
Organism=Escherichia coli, GI1787494, Length=197, Percent_Identity=29.4416243654822, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787809, Length=194, Percent_Identity=24.7422680412371, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y434_BUCAP (Q8K9B4)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660766.1
- EnsemblBacteria:   EBBUCT00000000512
- GeneID:   1005731
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg434
- GeneTree:   EBGT00050000007693
- HOGENOM:   HBG731519
- OMA:   FLFAGEA
- ProtClustDB:   PRK10739
- BioCyc:   BAPH198804:BUSG434-MONOMER
- InterPro:   IPR002771

Pfam domain/function: PF01914 MarC

EC number: NA

Molecular weight: Translated: 21907; Mature: 21907

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc74cb08)-; HASH(0xc4d0630)-; HASH(0xb30ccf4)-; HASH(0xaf91748)-; HASH(0xbe63310)-; HASH(0xb92d2e4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEIISTTILLILIMDPLGNLPIFMTILKKLDAKRRRIVVIREMIIALIVMLIFLFVGEK
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTILNLKTETVSISGGIILFLIAIKMIFPSDEGNNGTSSEEEPFLVPLAIPLVAGPSLL
HHHHHHCCHHEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHCCHHHH
ATLMLLSHQYLHHMPYLVGSLLIAWFFTIIILLLSGLFLKLFGDKGVNALERLMGLILIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LSTQMFLDGIKAWFKN
HHHHHHHHHHHHHHCH
>Mature Secondary Structure
MNEIISTTILLILIMDPLGNLPIFMTILKKLDAKRRRIVVIREMIIALIVMLIFLFVGEK
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTILNLKTETVSISGGIILFLIAIKMIFPSDEGNNGTSSEEEPFLVPLAIPLVAGPSLL
HHHHHHCCHHEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHCCHHHH
ATLMLLSHQYLHHMPYLVGSLLIAWFFTIIILLLSGLFLKLFGDKGVNALERLMGLILIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LSTQMFLDGIKAWFKN
HHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438