| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is yhgN [C]
Identifier: 21672699
GI number: 21672699
Start: 491313
End: 491903
Strand: Direct
Name: yhgN [C]
Synonym: BUsg434
Alternate gene names: 21672699
Gene position: 491313-491903 (Clockwise)
Preceding gene: 21672697
Following gene: 21672700
Centisome position: 76.59
GC content: 27.58
Gene sequence:
>591_bases ATGAATGAAATAATCTCTACAACTATATTACTAATTTTAATAATGGATCCCTTAGGGAACCTTCCAATTTTTATGACCAT ACTAAAAAAATTAGATGCAAAAAGGAGAAGAATAGTAGTTATACGTGAAATGATTATAGCTCTGATTGTGATGTTAATAT TTTTATTTGTCGGAGAAAAAATACTTACTATTCTTAATTTAAAAACTGAAACAGTTTCTATATCTGGAGGAATTATTTTA TTTCTTATTGCTATTAAAATGATTTTTCCATCCGATGAAGGTAACAATGGAACTTCTTCAGAAGAAGAACCATTTTTAGT TCCATTAGCCATCCCATTAGTTGCAGGACCTTCTTTATTGGCTACATTAATGTTGTTATCTCATCAGTATTTACATCATA TGCCTTATTTAGTGGGATCATTACTGATTGCATGGTTTTTTACAATCATAATATTGTTATTATCTGGTTTATTTTTAAAA TTATTTGGTGATAAGGGTGTAAATGCATTAGAACGATTAATGGGTCTTATATTAATAATGCTTTCTACACAAATGTTTCT TGATGGAATAAAAGCATGGTTTAAAAATTAA
Upstream 100 bases:
>100_bases TAATATTAATATGTTTATATTAAATAAAAAATTTTAGTGTTTTATTCAAATTACATATCGTGAAAAACTTTACATTTCTA AAAGGACATAATAAATTAAA
Downstream 100 bases:
>100_bases AAATTATTAAATAAGGATGATTATATGAATTTAAGAAAAATGACTGAATTAAATATAACAGGAAAAAAAATTTTAATAAG AACAGATTTAAATGTTCCTA
Product: putative dITP- and XTP- hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MNEIISTTILLILIMDPLGNLPIFMTILKKLDAKRRRIVVIREMIIALIVMLIFLFVGEKILTILNLKTETVSISGGIIL FLIAIKMIFPSDEGNNGTSSEEEPFLVPLAIPLVAGPSLLATLMLLSHQYLHHMPYLVGSLLIAWFFTIIILLLSGLFLK LFGDKGVNALERLMGLILIMLSTQMFLDGIKAWFKN
Sequences:
>Translated_196_residues MNEIISTTILLILIMDPLGNLPIFMTILKKLDAKRRRIVVIREMIIALIVMLIFLFVGEKILTILNLKTETVSISGGIIL FLIAIKMIFPSDEGNNGTSSEEEPFLVPLAIPLVAGPSLLATLMLLSHQYLHHMPYLVGSLLIAWFFTIIILLLSGLFLK LFGDKGVNALERLMGLILIMLSTQMFLDGIKAWFKN >Mature_196_residues MNEIISTTILLILIMDPLGNLPIFMTILKKLDAKRRRIVVIREMIIALIVMLIFLFVGEKILTILNLKTETVSISGGIIL FLIAIKMIFPSDEGNNGTSSEEEPFLVPLAIPLVAGPSLLATLMLLSHQYLHHMPYLVGSLLIAWFFTIIILLLSGLFLK LFGDKGVNALERLMGLILIMLSTQMFLDGIKAWFKN
Specific function: Unknown
COG id: COG2095
COG function: function code U; Multiple antibiotic transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0056 (marC) family
Homologues:
Organism=Escherichia coli, GI1789842, Length=197, Percent_Identity=70.5583756345178, Blast_Score=274, Evalue=3e-75, Organism=Escherichia coli, GI1787494, Length=197, Percent_Identity=29.4416243654822, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787809, Length=194, Percent_Identity=24.7422680412371, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y434_BUCAP (Q8K9B4)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660766.1 - EnsemblBacteria: EBBUCT00000000512 - GeneID: 1005731 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg434 - GeneTree: EBGT00050000007693 - HOGENOM: HBG731519 - OMA: FLFAGEA - ProtClustDB: PRK10739 - BioCyc: BAPH198804:BUSG434-MONOMER - InterPro: IPR002771
Pfam domain/function: PF01914 MarC
EC number: NA
Molecular weight: Translated: 21907; Mature: 21907
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc74cb08)-; HASH(0xc4d0630)-; HASH(0xb30ccf4)-; HASH(0xaf91748)-; HASH(0xbe63310)-; HASH(0xb92d2e4)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEIISTTILLILIMDPLGNLPIFMTILKKLDAKRRRIVVIREMIIALIVMLIFLFVGEK CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTILNLKTETVSISGGIILFLIAIKMIFPSDEGNNGTSSEEEPFLVPLAIPLVAGPSLL HHHHHHCCHHEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHCCHHHH ATLMLLSHQYLHHMPYLVGSLLIAWFFTIIILLLSGLFLKLFGDKGVNALERLMGLILIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LSTQMFLDGIKAWFKN HHHHHHHHHHHHHHCH >Mature Secondary Structure MNEIISTTILLILIMDPLGNLPIFMTILKKLDAKRRRIVVIREMIIALIVMLIFLFVGEK CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTILNLKTETVSISGGIILFLIAIKMIFPSDEGNNGTSSEEEPFLVPLAIPLVAGPSLL HHHHHHCCHHEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHCCHHHH ATLMLLSHQYLHHMPYLVGSLLIAWFFTIIILLLSGLFLKLFGDKGVNALERLMGLILIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LSTQMFLDGIKAWFKN HHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12089438