| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is pyrG
Identifier: 21672672
GI number: 21672672
Start: 451890
End: 453551
Strand: Direct
Name: pyrG
Synonym: BUsg399
Alternate gene names: 21672672
Gene position: 451890-453551 (Clockwise)
Preceding gene: 21672671
Following gene: 21672673
Centisome position: 70.45
GC content: 27.26
Gene sequence:
>1662_bases ATGACTAAAAATTATATTTTTATAACTGGCGGCGTAGTATCATCTTTAGGAAAGGGTATTGCAGCTGCTTCATTGGGAGC TGTATTAGAAGCTCGAAATTTAAAAATAACTATTATGAAATTAGATCCATATATTAATGTTGATCCAGGAACAATGAGTC CTATTCAACATGGAGAAGTCTTTGTTACTGAAGATGGTGCGGAAACAGATCTAGATTTAGGTCATTATGAACGTTTTATT CGAACAAAAATGACATGTTTAAATAATTTTACTACTGGAAGTATTTATTCTGAAGTTTTAAAAAAAGAAAGAAGAGGTGA TTATTTAGGTTCAACTATTCAAGTAATACCGCATATTACTAATGCTATTAAAGATAGAATAATTTTATGCTCTAAAAATA GCGATATTATCCTTGTCGAAATAGGTGGGACAGTTGGAGATATTGAATCTTTACCATTTCTTGAAGCAATTCGTCAACTA GCCGTGGACATTGGGCGTAAAAATGTAATATACATACATTTAACACTTGTACCGTATATAAAAACAGCTGGAGAAATTAA AACTAAACCTACTCAACATTCAGTAAAAGAATTGCTATCAATTGGAATACAACCAGATATTTTGATTTGTCGTTCTCAAA AAACAGTTCCAATAAACGAAAGAAAAAAAATTGCATTATTTTGCAATGTTCCAGTGAATGCTGTAATCTCTTTAAAAGAC GTAGATTCGATATACACAATACCAAAACTGTTAAAAGATCAAAAATTAGATAATTATATTTGCGAATATTTTAAATTAAA TGTCCCTCAAGCTGATTTAAAAGAATGGGAAAAAGTTATTTATGAAGAAAAAAATGCTAGTAAAGAAATTATTATTGGTA TAATAGGAAAATATATAAAATTGCCTGATGCATATAAATCAGTAATAGAAGCACTTAAACATGCAGGATTAAAAAATAAA ATTAAAGTAAAAATAGAGTTAATTAACTCTCAAGAAATAGAAAATAAAAATTTTAAATTATTACAAAATCTTAATGGTAT TCTAATACCAGGTGGTTTTGGAGATCGGGGTATAATAGGAAAATTATTATCTGTTCAATACGCACGTGAAAATAATATTC CTTATTTCGGAATATGCTTAGGAATGCAAATAGCAATCATAGAATTCGCACAAAATGTTATAGGAATTAAAGAAGCGAAT TCTACAGAATTTGATCCACAATGTAAATTTCCCGTGATCGATTTAATTAAAACTAAAAAAAATGATATAAAAGATACAAG ACAAGGAAAAAAAAATAATAAATCTAATTTTGGAGGTACTATGAGACTAGGAAGTCAACCGTGCAAATTAATTTTTAATA GTTTGTCTAGAAAATTATATAAAAAAGATACCATTATAGAACGGCATAGACATCGATATGAAGTAAACAATTTTTTATTA AAAAAAATAGAAAAAAATGGATTAAAAATAGCAGGACGTTCTAAAAAAAATAATATAGTTGAAATCATAGAAATTTTTGA TCATCCATGGTTTATTGGTTGTCAATTTCATCCTGAATTTACTTCTACACCGCGCGATGGACATCCATTATTCATAGATT TTATTAAATCAGCAAAAAAAAATAAAAAAAATAATTTTAAAATAAAGGTAAAAAATGTCTAA
Upstream 100 bases:
>100_bases TATTTGAAAATCTATTGAATTTATTTTACTAAAATAATTTAATTAAATATTAAAATTTTAAAACTATCTATTCATTTTAA CTGATATTTTTATATTTCGC
Downstream 100 bases:
>100_bases AATATTAAAAATAATTGGTCGTGAAATCATCGATTCTAGAGGTAATCCTACCATAGAATGTGAAGTTTTGCTTGAAGGAG GTTTTGTTGGTTTAGCTTCA
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MTKNYIFITGGVVSSLGKGIAAASLGAVLEARNLKITIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFI RTKMTCLNNFTTGSIYSEVLKKERRGDYLGSTIQVIPHITNAIKDRIILCSKNSDIILVEIGGTVGDIESLPFLEAIRQL AVDIGRKNVIYIHLTLVPYIKTAGEIKTKPTQHSVKELLSIGIQPDILICRSQKTVPINERKKIALFCNVPVNAVISLKD VDSIYTIPKLLKDQKLDNYICEYFKLNVPQADLKEWEKVIYEEKNASKEIIIGIIGKYIKLPDAYKSVIEALKHAGLKNK IKVKIELINSQEIENKNFKLLQNLNGILIPGGFGDRGIIGKLLSVQYARENNIPYFGICLGMQIAIIEFAQNVIGIKEAN STEFDPQCKFPVIDLIKTKKNDIKDTRQGKKNNKSNFGGTMRLGSQPCKLIFNSLSRKLYKKDTIIERHRHRYEVNNFLL KKIEKNGLKIAGRSKKNNIVEIIEIFDHPWFIGCQFHPEFTSTPRDGHPLFIDFIKSAKKNKKNNFKIKVKNV
Sequences:
>Translated_553_residues MTKNYIFITGGVVSSLGKGIAAASLGAVLEARNLKITIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFI RTKMTCLNNFTTGSIYSEVLKKERRGDYLGSTIQVIPHITNAIKDRIILCSKNSDIILVEIGGTVGDIESLPFLEAIRQL AVDIGRKNVIYIHLTLVPYIKTAGEIKTKPTQHSVKELLSIGIQPDILICRSQKTVPINERKKIALFCNVPVNAVISLKD VDSIYTIPKLLKDQKLDNYICEYFKLNVPQADLKEWEKVIYEEKNASKEIIIGIIGKYIKLPDAYKSVIEALKHAGLKNK IKVKIELINSQEIENKNFKLLQNLNGILIPGGFGDRGIIGKLLSVQYARENNIPYFGICLGMQIAIIEFAQNVIGIKEAN STEFDPQCKFPVIDLIKTKKNDIKDTRQGKKNNKSNFGGTMRLGSQPCKLIFNSLSRKLYKKDTIIERHRHRYEVNNFLL KKIEKNGLKIAGRSKKNNIVEIIEIFDHPWFIGCQFHPEFTSTPRDGHPLFIDFIKSAKKNKKNNFKIKVKNV >Mature_552_residues TKNYIFITGGVVSSLGKGIAAASLGAVLEARNLKITIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIR TKMTCLNNFTTGSIYSEVLKKERRGDYLGSTIQVIPHITNAIKDRIILCSKNSDIILVEIGGTVGDIESLPFLEAIRQLA VDIGRKNVIYIHLTLVPYIKTAGEIKTKPTQHSVKELLSIGIQPDILICRSQKTVPINERKKIALFCNVPVNAVISLKDV DSIYTIPKLLKDQKLDNYICEYFKLNVPQADLKEWEKVIYEEKNASKEIIIGIIGKYIKLPDAYKSVIEALKHAGLKNKI KVKIELINSQEIENKNFKLLQNLNGILIPGGFGDRGIIGKLLSVQYARENNIPYFGICLGMQIAIIEFAQNVIGIKEANS TEFDPQCKFPVIDLIKTKKNDIKDTRQGKKNNKSNFGGTMRLGSQPCKLIFNSLSRKLYKKDTIIERHRHRYEVNNFLLK KIEKNGLKIAGRSKKNNIVEIIEIFDHPWFIGCQFHPEFTSTPRDGHPLFIDFIKSAKKNKKNNFKIKVKNV
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=561, Percent_Identity=42.602495543672, Blast_Score=472, Evalue=1e-133, Organism=Homo sapiens, GI28559085, Length=566, Percent_Identity=43.1095406360424, Blast_Score=471, Evalue=1e-132, Organism=Homo sapiens, GI28559083, Length=566, Percent_Identity=43.1095406360424, Blast_Score=471, Evalue=1e-132, Organism=Homo sapiens, GI221316689, Length=566, Percent_Identity=43.1095406360424, Blast_Score=471, Evalue=1e-132, Organism=Escherichia coli, GI1789142, Length=547, Percent_Identity=68.1901279707495, Blast_Score=787, Evalue=0.0, Organism=Caenorhabditis elegans, GI25148299, Length=617, Percent_Identity=35.4943273905997, Blast_Score=398, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6322563, Length=551, Percent_Identity=41.3793103448276, Blast_Score=442, Evalue=1e-125, Organism=Saccharomyces cerevisiae, GI6319432, Length=569, Percent_Identity=40.597539543058, Blast_Score=442, Evalue=1e-125, Organism=Drosophila melanogaster, GI24664469, Length=561, Percent_Identity=41.5329768270945, Blast_Score=457, Evalue=1e-129, Organism=Drosophila melanogaster, GI21357815, Length=507, Percent_Identity=40.2366863905325, Blast_Score=391, Evalue=1e-109,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_BUCAP (P59039)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660739.1 - ProteinModelPortal: P59039 - SMR: P59039 - EnsemblBacteria: EBBUCT00000000163 - GeneID: 1005761 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg399 - GeneTree: EBGT00050000008171 - HOGENOM: HBG597806 - OMA: RVTMQKL - ProtClustDB: PRK05380 - BioCyc: BAPH198804:BUSG399-MONOMER - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 62454; Mature: 62323
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 379-379 ACT_SITE 517-517 ACT_SITE 519-519
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKNYIFITGGVVSSLGKGIAAASLGAVLEARNLKITIMKLDPYINVDPGTMSPIQHGEV CCCCEEEEECHHHHHHCCCHHHHHHHHHHEECCCEEEEEEECCEEECCCCCCCCCCCCEE FVTEDGAETDLDLGHYERFIRTKMTCLNNFTTGSIYSEVLKKERRGDYLGSTIQVIPHIT EEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH NAIKDRIILCSKNSDIILVEIGGTVGDIESLPFLEAIRQLAVDIGRKNVIYIHLTLVPYI HHHHCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEHHH KTAGEIKTKPTQHSVKELLSIGIQPDILICRSQKTVPINERKKIALFCNVPVNAVISLKD HCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEEECC VDSIYTIPKLLKDQKLDNYICEYFKLNVPQADLKEWEKVIYEEKNASKEIIIGIIGKYIK CHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEHHEEHHHHHC LPDAYKSVIEALKHAGLKNKIKVKIELINSQEIENKNFKLLQNLNGILIPGGFGDRGIIG CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCHHHH KLLSVQYARENNIPYFGICLGMQIAIIEFAQNVIGIKEANSTEFDPQCKFPVIDLIKTKK HHHHHEEHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCC NDIKDTRQGKKNNKSNFGGTMRLGSQPCKLIFNSLSRKLYKKDTIIERHRHRYEVNNFLL CHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKIEKNGLKIAGRSKKNNIVEIIEIFDHPWFIGCQFHPEFTSTPRDGHPLFIDFIKSAKK HHHHHCCCEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHC NKKNNFKIKVKNV CCCCCEEEEEECC >Mature Secondary Structure TKNYIFITGGVVSSLGKGIAAASLGAVLEARNLKITIMKLDPYINVDPGTMSPIQHGEV CCCEEEEECHHHHHHCCCHHHHHHHHHHEECCCEEEEEEECCEEECCCCCCCCCCCCEE FVTEDGAETDLDLGHYERFIRTKMTCLNNFTTGSIYSEVLKKERRGDYLGSTIQVIPHIT EEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH NAIKDRIILCSKNSDIILVEIGGTVGDIESLPFLEAIRQLAVDIGRKNVIYIHLTLVPYI HHHHCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEHHH KTAGEIKTKPTQHSVKELLSIGIQPDILICRSQKTVPINERKKIALFCNVPVNAVISLKD HCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEEECC VDSIYTIPKLLKDQKLDNYICEYFKLNVPQADLKEWEKVIYEEKNASKEIIIGIIGKYIK CHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEHHEEHHHHHC LPDAYKSVIEALKHAGLKNKIKVKIELINSQEIENKNFKLLQNLNGILIPGGFGDRGIIG CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCHHHH KLLSVQYARENNIPYFGICLGMQIAIIEFAQNVIGIKEANSTEFDPQCKFPVIDLIKTKK HHHHHEEHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCC NDIKDTRQGKKNNKSNFGGTMRLGSQPCKLIFNSLSRKLYKKDTIIERHRHRYEVNNFLL CHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKIEKNGLKIAGRSKKNNIVEIIEIFDHPWFIGCQFHPEFTSTPRDGHPLFIDFIKSAKK HHHHHCCCEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHC NKKNNFKIKVKNV CCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438