Definition Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome.
Accession NC_004061
Length 641,454

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The map label for this gene is yceA [C]

Identifier: 21672628

GI number: 21672628

Start: 401233

End: 402171

Strand: Reverse

Name: yceA [C]

Synonym: BUsg353

Alternate gene names: 21672628

Gene position: 402171-401233 (Counterclockwise)

Preceding gene: 21672629

Following gene: 21672624

Centisome position: 62.7

GC content: 23.11

Gene sequence:

>939_bases
ATGATGTCAAATTTATGTAATCGTATTTCGAAAAAAGAATTAAAAAAAAAGATATTAATGAATGAAGAATCGCGTATTGT
AGTTTCTTTCTACAAATATTTTTTAATAAAAAACACAAAAGAATATAGAGATCGAATTTATCAAAATTTTTATAAATATA
ATGTTTTAGGAAGAGTTTATGTATCTGATGAAGGTATTAATGCGCAAATTAGTATTCCTGTAAAATTTTATTTTTTTGTA
AAAAATTTTTTATATAATTCTGATTTAGAATTAAATAATTTATTCATTAATAAATCGTTAAGTAATCACAAAAAAGCATT
TTGGGTTCTTTCTGTTAAAATTAAAAAAAAGATTGTTAATGATGGTATTACAAATCCATTATTTAATTTTAAAAAAGTAG
GTATTTATATCAAATCAAGGCAAGTTAATATGATGTTAAGTGATCGAAATGTAATATTTATTGATATGAGAAATTCTTAT
GAGTATGAGATTGGACATTTTCCAAATGCTATAGAAATTAAAAGTCAAACTTTTCGAGAACAATTAAAGAAAGTGATTCA
AATTATGCATTATGCTAAAAATAAAAAAATTGTAATGTATTGTACAGGTGGTATTCGTTGTGAAAAAGCTAGCGCTTGGA
TGCATTTTAATGGTTTTAAATACGTGTATCATTTAAAGAATGGTATTCTTGGTTATGTTCATGATGCTAACAAAAATGGA
TTACCTATTCTTTTCCAAGGAAGTAATTTTGTTTTTGATAATAGAATGAGTGAAAAAATTTCAGATAAGATTATATCCTT
TTGTAAACAGTGTGATAAGCCTTCAGATCGATATGTAAATTGCAATTTTAATTTATGTCATCTTCTTTTTATTCAATGTA
AAGATTGTACAATAAAATTTAAAAAATGTTGTTCTAAATACTGTATGCAGCATCTATAA

Upstream 100 bases:

>100_bases
AAAAAGCTTAAATGAAATATATTTAACACTATCGCAACAATTAGAATCTCTTCATGACGCATTTTGCAAAAAAAATAAAA
TTTTTAATTAAAGGTTTTTT

Downstream 100 bases:

>100_bases
ATTATTTTTTTAAAAAATAATTTATAATTTTTTTTCTAAATTTTCCCAATATATTAATATTTTTTCTAATTTTTTTTCTT
CTATATTAAATTGCTTTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MMSNLCNRISKKELKKKILMNEESRIVVSFYKYFLIKNTKEYRDRIYQNFYKYNVLGRVYVSDEGINAQISIPVKFYFFV
KNFLYNSDLELNNLFINKSLSNHKKAFWVLSVKIKKKIVNDGITNPLFNFKKVGIYIKSRQVNMMLSDRNVIFIDMRNSY
EYEIGHFPNAIEIKSQTFREQLKKVIQIMHYAKNKKIVMYCTGGIRCEKASAWMHFNGFKYVYHLKNGILGYVHDANKNG
LPILFQGSNFVFDNRMSEKISDKIISFCKQCDKPSDRYVNCNFNLCHLLFIQCKDCTIKFKKCCSKYCMQHL

Sequences:

>Translated_312_residues
MMSNLCNRISKKELKKKILMNEESRIVVSFYKYFLIKNTKEYRDRIYQNFYKYNVLGRVYVSDEGINAQISIPVKFYFFV
KNFLYNSDLELNNLFINKSLSNHKKAFWVLSVKIKKKIVNDGITNPLFNFKKVGIYIKSRQVNMMLSDRNVIFIDMRNSY
EYEIGHFPNAIEIKSQTFREQLKKVIQIMHYAKNKKIVMYCTGGIRCEKASAWMHFNGFKYVYHLKNGILGYVHDANKNG
LPILFQGSNFVFDNRMSEKISDKIISFCKQCDKPSDRYVNCNFNLCHLLFIQCKDCTIKFKKCCSKYCMQHL
>Mature_312_residues
MMSNLCNRISKKELKKKILMNEESRIVVSFYKYFLIKNTKEYRDRIYQNFYKYNVLGRVYVSDEGINAQISIPVKFYFFV
KNFLYNSDLELNNLFINKSLSNHKKAFWVLSVKIKKKIVNDGITNPLFNFKKVGIYIKSRQVNMMLSDRNVIFIDMRNSY
EYEIGHFPNAIEIKSQTFREQLKKVIQIMHYAKNKKIVMYCTGGIRCEKASAWMHFNGFKYVYHLKNGILGYVHDANKNG
LPILFQGSNFVFDNRMSEKISDKIISFCKQCDKPSDRYVNCNFNLCHLLFIQCKDCTIKFKKCCSKYCMQHL

Specific function: Unknown. [C]

COG id: COG1054

COG function: function code R; Predicted sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain

Homologues:

Organism=Homo sapiens, GI111038120, Length=303, Percent_Identity=27.3927392739274, Blast_Score=105, Evalue=4e-23,
Organism=Escherichia coli, GI1787294, Length=309, Percent_Identity=52.7508090614887, Blast_Score=351, Evalue=4e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y353_BUCAP (Q8K9I2)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660695.1
- ProteinModelPortal:   Q8K9I2
- EnsemblBacteria:   EBBUCT00000000050
- GeneID:   1005802
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg353
- GeneTree:   EBGT00050000008119
- HOGENOM:   HBG366219
- OMA:   TTPVMMY
- ProtClustDB:   PRK00142
- BioCyc:   BAPH198804:BUSG353-MONOMER
- HAMAP:   MF_00469
- InterPro:   IPR001763
- InterPro:   IPR020936
- Gene3D:   G3DSA:3.40.250.10
- SMART:   SM00450

Pfam domain/function: PF00581 Rhodanese; SSF52821 Rhodanese-like

EC number: NA

Molecular weight: Translated: 37060; Mature: 37060

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSNLCNRISKKELKKKILMNEESRIVVSFYKYFLIKNTKEYRDRIYQNFYKYNVLGRVY
CCHHHHHHHHHHHHHHHHHCCCCCEEHHEEHHHHHHCCCHHHHHHHHHHHHHEEEEEEEE
VSDEGINAQISIPVKFYFFVKNFLYNSDLELNNLFINKSLSNHKKAFWVLSVKIKKKIVN
EECCCCCEEEEECEEHEEHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEEEEEEHHHHHH
DGITNPLFNFKKVGIYIKSRQVNMMLSDRNVIFIDMRNSYEYEIGHFPNAIEIKSQTFRE
CCCCCCCCCCEEEEEEEEEEEEEEEEECCCEEEEEECCCCEEECCCCCCEEEEHHHHHHH
QLKKVIQIMHYAKNKKIVMYCTGGIRCEKASAWMHFNGFKYVYHLKNGILGYVHDANKNG
HHHHHHHHHHHCCCCEEEEEECCCEEEECCCEEEEECCEEEEEEECCCCEEEEEECCCCC
LPILFQGSNFVFDNRMSEKISDKIISFCKQCDKPSDRYVNCNFNLCHLLFIQCKDCTIKF
CEEEEECCCEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEEEECCCEEHH
KKCCSKYCMQHL
HHHHHHHHHHCC
>Mature Secondary Structure
MMSNLCNRISKKELKKKILMNEESRIVVSFYKYFLIKNTKEYRDRIYQNFYKYNVLGRVY
CCHHHHHHHHHHHHHHHHHCCCCCEEHHEEHHHHHHCCCHHHHHHHHHHHHHEEEEEEEE
VSDEGINAQISIPVKFYFFVKNFLYNSDLELNNLFINKSLSNHKKAFWVLSVKIKKKIVN
EECCCCCEEEEECEEHEEHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEEEEEEHHHHHH
DGITNPLFNFKKVGIYIKSRQVNMMLSDRNVIFIDMRNSYEYEIGHFPNAIEIKSQTFRE
CCCCCCCCCCEEEEEEEEEEEEEEEEECCCEEEEEECCCCEEECCCCCCEEEEHHHHHHH
QLKKVIQIMHYAKNKKIVMYCTGGIRCEKASAWMHFNGFKYVYHLKNGILGYVHDANKNG
HHHHHHHHHHHCCCCEEEEEECCCEEEECCCEEEEECCEEEEEEECCCCEEEEEECCCCC
LPILFQGSNFVFDNRMSEKISDKIISFCKQCDKPSDRYVNCNFNLCHLLFIQCKDCTIKF
CEEEEECCCEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEEEECCCEEHH
KKCCSKYCMQHL
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438