| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is pncB
Identifier: 21672624
GI number: 21672624
Start: 394698
End: 395894
Strand: Reverse
Name: pncB
Synonym: BUsg349
Alternate gene names: 21672624
Gene position: 395894-394698 (Counterclockwise)
Preceding gene: 21672628
Following gene: 21672623
Centisome position: 61.72
GC content: 25.73
Gene sequence:
>1197_bases ATGAAACAATATAATTATCCAATAGTGAAAACATTACTTGATACTGATGCATATAAATTTTATATGCAGCAAGCTGTTTT TTATCATTATAAAAATGTCGATGTAGTTGCAGAATTTATTTGCAGAGGTCCTAATATTTTAGGTTGTTATTCTCATATTT TATTAGACCAAATTAATATGATGTCTTCCTTATCTCTTAGTCATGAAGAGTATCTTTATATGACTACTTTTCCATTTTTT AAAAAAGAATATTTACATTGGTTAAAAAAATTTCGTTATAATATTACACAAGTTAAAGTTGATAATTATCATGGTCAACT TCATATTCGTATAAGTGGATTATGGAAAGAAGTAATTTTATGGGAAGTCCCTATTTTATCATTAATTAGTGAAATTTTTC ATAGACATTGTTATCCAGAAATTACTTCGAATATTGCAGTACAACATTTAAATAAAAAATTAAAAGAATTTTTTAAAAAA AACAGAGATGTAGATTTATCTCGTTTAAAAATAGTAGATTTTGGAACAAGAAGACGATTTTCTTATGATGTACAATATTC AATTATCAAAAGATTAAAAGATACATTTCCATTTTTAATTGGTTCAAGTAACTATCATATATCACGTATTTTAAAATTAT TGCCAGTAGGTACCCAAGCTCATGAATGGTTTCAAGCACACCAACAAATTAGTTCCAATCTCAGAAATAGTCAAACATTA GCATTAAAAACATGGTTGTCTCAATATAATCAACATTTAAGCATCGCTCTTACAGATTGTATTACAATGGATTCGTTTTT ACGTGATTTTAATTTATTTTTTTCAAAATCTTATCAAGGTATCAGACATGATTCAGGAGATCCAGTAAAATGGGGTGAAA AAGCTATTGAACATTATGAACGATTAGGTATTGATCCTACTACTAAAACGTTATTATTTTCAGATAATTTAAATTTTAGA AAAATGATATCTCTTTATAAAAAATTTAATAATAGAGTAAATATTATATTTGGCATCGGAACAAAATTAACTTGTGATAT TCCAAATGTTAAGCCGTTAAATATAGTAATCAAACTTGTCAAATGTAATGGTAAACCAGTTGCTAAATTATCTGATAGTC CTGGTAAAACCTTTTGTCTAGATAGAAATTTTATTAAATCTTTATGTAAAGCATTTGATTTGTCTTTGACAGTGTAA
Upstream 100 bases:
>100_bases ATTTTTTAATTTTTTAAATATTTTTATATAATTTTAAGTATAAAGTTATATCATAATTATCATACTATAAAAAATAATAC TATAAAAAAATAGATATATT
Downstream 100 bases:
>100_bases TTTAATACTAGTCACTTTGATTTGCTATTTTTCGATAGACTATTTAAAAATATACAAGGCAAAATTATGAGTAGAATATC AATATCAGAAATTTATAAAG
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MKQYNYPIVKTLLDTDAYKFYMQQAVFYHYKNVDVVAEFICRGPNILGCYSHILLDQINMMSSLSLSHEEYLYMTTFPFF KKEYLHWLKKFRYNITQVKVDNYHGQLHIRISGLWKEVILWEVPILSLISEIFHRHCYPEITSNIAVQHLNKKLKEFFKK NRDVDLSRLKIVDFGTRRRFSYDVQYSIIKRLKDTFPFLIGSSNYHISRILKLLPVGTQAHEWFQAHQQISSNLRNSQTL ALKTWLSQYNQHLSIALTDCITMDSFLRDFNLFFSKSYQGIRHDSGDPVKWGEKAIEHYERLGIDPTTKTLLFSDNLNFR KMISLYKKFNNRVNIIFGIGTKLTCDIPNVKPLNIVIKLVKCNGKPVAKLSDSPGKTFCLDRNFIKSLCKAFDLSLTV
Sequences:
>Translated_398_residues MKQYNYPIVKTLLDTDAYKFYMQQAVFYHYKNVDVVAEFICRGPNILGCYSHILLDQINMMSSLSLSHEEYLYMTTFPFF KKEYLHWLKKFRYNITQVKVDNYHGQLHIRISGLWKEVILWEVPILSLISEIFHRHCYPEITSNIAVQHLNKKLKEFFKK NRDVDLSRLKIVDFGTRRRFSYDVQYSIIKRLKDTFPFLIGSSNYHISRILKLLPVGTQAHEWFQAHQQISSNLRNSQTL ALKTWLSQYNQHLSIALTDCITMDSFLRDFNLFFSKSYQGIRHDSGDPVKWGEKAIEHYERLGIDPTTKTLLFSDNLNFR KMISLYKKFNNRVNIIFGIGTKLTCDIPNVKPLNIVIKLVKCNGKPVAKLSDSPGKTFCLDRNFIKSLCKAFDLSLTV >Mature_398_residues MKQYNYPIVKTLLDTDAYKFYMQQAVFYHYKNVDVVAEFICRGPNILGCYSHILLDQINMMSSLSLSHEEYLYMTTFPFF KKEYLHWLKKFRYNITQVKVDNYHGQLHIRISGLWKEVILWEVPILSLISEIFHRHCYPEITSNIAVQHLNKKLKEFFKK NRDVDLSRLKIVDFGTRRRFSYDVQYSIIKRLKDTFPFLIGSSNYHISRILKLLPVGTQAHEWFQAHQQISSNLRNSQTL ALKTWLSQYNQHLSIALTDCITMDSFLRDFNLFFSKSYQGIRHDSGDPVKWGEKAIEHYERLGIDPTTKTLLFSDNLNFR KMISLYKKFNNRVNIIFGIGTKLTCDIPNVKPLNIVIKLVKCNGKPVAKLSDSPGKTFCLDRNFIKSLCKAFDLSLTV
Specific function: NAD biosynthesis; nicotinamide to NaMN; second step. [C]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family
Homologues:
Organism=Escherichia coli, GI1787162, Length=394, Percent_Identity=58.8832487309645, Blast_Score=510, Evalue=1e-146, Organism=Saccharomyces cerevisiae, GI6324783, Length=401, Percent_Identity=31.1720698254364, Blast_Score=185, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PNCB_BUCAP (Q8K9I6)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660691.1 - ProteinModelPortal: Q8K9I6 - SMR: Q8K9I6 - EnsemblBacteria: EBBUCT00000000086 - GeneID: 1005807 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg349 - GeneTree: EBGT00050000007732 - HOGENOM: HBG325503 - OMA: GNTFYGK - ProtClustDB: PRK05321 - BioCyc: BAPH198804:BUSG349-MONOMER - GO: GO:0005737 - HAMAP: MF_00570 - InterPro: IPR006406 - InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR002638 - PANTHER: PTHR11098:SF1 - PIRSF: PIRSF000484 - TIGRFAMs: TIGR01514
Pfam domain/function: PF04095 NAPRTase; SSF51690 Q_phspho_trans
EC number: =2.4.2.11
Molecular weight: Translated: 46778; Mature: 46778
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQYNYPIVKTLLDTDAYKFYMQQAVFYHYKNVDVVAEFICRGPNILGCYSHILLDQINM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH MSSLSLSHEEYLYMTTFPFFKKEYLHWLKKFRYNITQVKVDNYHGQLHIRISGLWKEVIL HHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEEEHHHHHHHH WEVPILSLISEIFHRHCYPEITSNIAVQHLNKKLKEFFKKNRDVDLSRLKIVDFGTRRRF HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCE SYDVQYSIIKRLKDTFPFLIGSSNYHISRILKLLPVGTQAHEWFQAHQQISSNLRNSQTL EECHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHH ALKTWLSQYNQHLSIALTDCITMDSFLRDFNLFFSKSYQGIRHDSGDPVKWGEKAIEHYE HHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH RLGIDPTTKTLLFSDNLNFRKMISLYKKFNNRVNIIFGIGTKLTCDIPNVKPLNIVIKLV HCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCHHHHEEEEE KCNGKPVAKLSDSPGKTFCLDRNFIKSLCKAFDLSLTV ECCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKQYNYPIVKTLLDTDAYKFYMQQAVFYHYKNVDVVAEFICRGPNILGCYSHILLDQINM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH MSSLSLSHEEYLYMTTFPFFKKEYLHWLKKFRYNITQVKVDNYHGQLHIRISGLWKEVIL HHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEEEHHHHHHHH WEVPILSLISEIFHRHCYPEITSNIAVQHLNKKLKEFFKKNRDVDLSRLKIVDFGTRRRF HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCE SYDVQYSIIKRLKDTFPFLIGSSNYHISRILKLLPVGTQAHEWFQAHQQISSNLRNSQTL EECHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHH ALKTWLSQYNQHLSIALTDCITMDSFLRDFNLFFSKSYQGIRHDSGDPVKWGEKAIEHYE HHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH RLGIDPTTKTLLFSDNLNFRKMISLYKKFNNRVNIIFGIGTKLTCDIPNVKPLNIVIKLV HCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCHHHHEEEEE KCNGKPVAKLSDSPGKTFCLDRNFIKSLCKAFDLSLTV ECCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438