| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is purH
Identifier: 21672325
GI number: 21672325
Start: 33999
End: 35579
Strand: Reverse
Name: purH
Synonym: BUsg032
Alternate gene names: 21672325
Gene position: 35579-33999 (Counterclockwise)
Preceding gene: 21672326
Following gene: 21672323
Centisome position: 5.55
GC content: 26.69
Gene sequence:
>1581_bases ATGTCATTAAATAATATTATAAAGAATGCTTTAGTTAGTTTGTCAGATAAAACAGATCTTTTAAAGATATCAAAGATACT TGCAGAAAAAAAAATTAATTTATTTTGTACAGGAGGAACAGCTGACGTTTTAAAAAAAAATAAAATTCCTGTTCTTGAAA TATCAGACTACACAAATTTTCCCGAAATAATGAATGGAAGACTCAAAACATTACACCCGAAAATAATAGGTGGTATTTTA GGTCGAAGGGAAAAAGATCAAAAAATTATGAAATTACATAATTTAATACCTATAGATATAGTAATTGTGAATTTTTATCC ATTTGAAAAAATACAAAATCGAAAAGAATTTACTATAGAAGAAATAATTGACAATATTGATATTGGTGGACCAACACTCG TACGTGCTGCGGCTAAAAATTATAAAGATGTTATAGTTATAGTAGATTTATCAGATTTTACATCATGTATTCAATTAATA AATACTAATACTGTAAGTTTAGAAACGAGATTTGATTTAGCTACTAAAGCTTTTAAGTACACTGCACTATATGAAGAAAT AATTTCAAAATATTTTTTAAAAAAAAATCCTTATAGAAAAAAACATCAAAAAAATATTTTTCCAAATGAATTTCAATTAA ATTTCATAAAAAAACAAGATTTAAGATATGGAGAAAATCAACATCAAAAATCTTCATTTTATATAGAAAAAGAAATATTA AAATCTGGTACGATCAGTTCATCGAATCAAATACAAGGTAAAAATCTATCTTATAATAATATATGTGATGCTGATATAGC ATTAGAATGCGTAAAAGAATTTTCTAAACCAACATGTGTTATTGTAAAACATGGAAATCCTTGCGGAGTTTCAGAAAGTA ATTCTTTAATCAAAGCTTACTTCTCTGCTTATAATGCAGATCCGATTTCAGCTTTCGGAGGAATAATTGCTTTTAATTGT CTCTTAGATTTAGACACAGCTCAAGAAATTGTTAAAAAACAGTTTGTCGAAGTTATTATTGCTCCTGAAATAGATGAAAT GGCTGTAAAAATACTAAAAAGAAAAAAAAATATACGTTTGCTTATTTGCGGAAAAATTGAAAAAAATAAAAAAGGTTTAG ATTTTAAAAGAATTACTAATGGTTTACTTATACAAGAATATGATTGTGATGAAATAAACGCAAAAAATTTTGATTTTGTT ACAAATCGTTTACCTACTGAAAAAGAATTAGAAGATGCTATTTTTTCTTGGAAAGTCGCTAAATTTGTTAAATCAAACGC TATTGTATACAGTTTAAATAAAACTACTATTGGAATAGGAGCAGGACAAACAAGCAGAATTGATGCAACTAAATTAGCAA ACTTAAAAGTAAAAGATCGAAATCACAATAATACTACAGGAGCAACTATGGCTTCTGATGCTTTTTTCCCTTTTCGAGAC GGGATAGATAATGCAGCTCTAATCGGTATTAGTTGTATTATCCAACCAGGTGGTTCTATTCGAGATAAAGAGGTAATTGA GTCTGCCAATGAGCATAATATAAGTATGATTTTTACTAAAAAGCGTCATTTTAAACATTAA
Upstream 100 bases:
>100_bases ATAGTAATCTATTTTTAAAAAATAAAAATTTTTACATATAAAAAATATTAAAATTTATATTAATTCATAGTCAATATTTT TATAAAAAAGAAAATAAATT
Downstream 100 bases:
>100_bases TAAAAGAGTAAAATTTATACAAATTTTTATTTTTTTAAATTATTAATATGGCTTATTCTTTAAATAAAGATATTATTTTT TATCTAAAAAATTAAATTTA
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MSLNNIIKNALVSLSDKTDLLKISKILAEKKINLFCTGGTADVLKKNKIPVLEISDYTNFPEIMNGRLKTLHPKIIGGIL GRREKDQKIMKLHNLIPIDIVIVNFYPFEKIQNRKEFTIEEIIDNIDIGGPTLVRAAAKNYKDVIVIVDLSDFTSCIQLI NTNTVSLETRFDLATKAFKYTALYEEIISKYFLKKNPYRKKHQKNIFPNEFQLNFIKKQDLRYGENQHQKSSFYIEKEIL KSGTISSSNQIQGKNLSYNNICDADIALECVKEFSKPTCVIVKHGNPCGVSESNSLIKAYFSAYNADPISAFGGIIAFNC LLDLDTAQEIVKKQFVEVIIAPEIDEMAVKILKRKKNIRLLICGKIEKNKKGLDFKRITNGLLIQEYDCDEINAKNFDFV TNRLPTEKELEDAIFSWKVAKFVKSNAIVYSLNKTTIGIGAGQTSRIDATKLANLKVKDRNHNNTTGATMASDAFFPFRD GIDNAALIGISCIIQPGGSIRDKEVIESANEHNISMIFTKKRHFKH
Sequences:
>Translated_526_residues MSLNNIIKNALVSLSDKTDLLKISKILAEKKINLFCTGGTADVLKKNKIPVLEISDYTNFPEIMNGRLKTLHPKIIGGIL GRREKDQKIMKLHNLIPIDIVIVNFYPFEKIQNRKEFTIEEIIDNIDIGGPTLVRAAAKNYKDVIVIVDLSDFTSCIQLI NTNTVSLETRFDLATKAFKYTALYEEIISKYFLKKNPYRKKHQKNIFPNEFQLNFIKKQDLRYGENQHQKSSFYIEKEIL KSGTISSSNQIQGKNLSYNNICDADIALECVKEFSKPTCVIVKHGNPCGVSESNSLIKAYFSAYNADPISAFGGIIAFNC LLDLDTAQEIVKKQFVEVIIAPEIDEMAVKILKRKKNIRLLICGKIEKNKKGLDFKRITNGLLIQEYDCDEINAKNFDFV TNRLPTEKELEDAIFSWKVAKFVKSNAIVYSLNKTTIGIGAGQTSRIDATKLANLKVKDRNHNNTTGATMASDAFFPFRD GIDNAALIGISCIIQPGGSIRDKEVIESANEHNISMIFTKKRHFKH >Mature_525_residues SLNNIIKNALVSLSDKTDLLKISKILAEKKINLFCTGGTADVLKKNKIPVLEISDYTNFPEIMNGRLKTLHPKIIGGILG RREKDQKIMKLHNLIPIDIVIVNFYPFEKIQNRKEFTIEEIIDNIDIGGPTLVRAAAKNYKDVIVIVDLSDFTSCIQLIN TNTVSLETRFDLATKAFKYTALYEEIISKYFLKKNPYRKKHQKNIFPNEFQLNFIKKQDLRYGENQHQKSSFYIEKEILK SGTISSSNQIQGKNLSYNNICDADIALECVKEFSKPTCVIVKHGNPCGVSESNSLIKAYFSAYNADPISAFGGIIAFNCL LDLDTAQEIVKKQFVEVIIAPEIDEMAVKILKRKKNIRLLICGKIEKNKKGLDFKRITNGLLIQEYDCDEINAKNFDFVT NRLPTEKELEDAIFSWKVAKFVKSNAIVYSLNKTTIGIGAGQTSRIDATKLANLKVKDRNHNNTTGATMASDAFFPFRDG IDNAALIGISCIIQPGGSIRDKEVIESANEHNISMIFTKKRHFKH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family
Homologues:
Organism=Homo sapiens, GI20127454, Length=481, Percent_Identity=34.7193347193347, Blast_Score=225, Evalue=8e-59, Organism=Escherichia coli, GI1790439, Length=531, Percent_Identity=53.6723163841808, Blast_Score=609, Evalue=1e-175, Organism=Caenorhabditis elegans, GI71985564, Length=482, Percent_Identity=33.402489626556, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI71985574, Length=317, Percent_Identity=28.7066246056782, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71985556, Length=61, Percent_Identity=49.1803278688525, Blast_Score=72, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6323056, Length=499, Percent_Identity=31.6633266533066, Blast_Score=219, Evalue=8e-58, Organism=Saccharomyces cerevisiae, GI6323768, Length=496, Percent_Identity=31.4516129032258, Blast_Score=219, Evalue=1e-57, Organism=Drosophila melanogaster, GI24649832, Length=494, Percent_Identity=32.5910931174089, Blast_Score=221, Evalue=1e-57,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PUR9_BUCAP (Q8KA70)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660392.1 - ProteinModelPortal: Q8KA70 - SMR: Q8KA70 - EnsemblBacteria: EBBUCT00000000333 - GeneID: 1005848 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg032 - GeneTree: EBGT00050000008052 - HOGENOM: HBG498048 - OMA: ASDGFFP - ProtClustDB: PRK00881 - BioCyc: BAPH198804:BUSG032-MONOMER - HAMAP: MF_00139 - InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 - Gene3D: G3DSA:3.40.50.1380 - PANTHER: PTHR11692 - PIRSF: PIRSF000414 - SMART: SM00798 - SMART: SM00851 - TIGRFAMs: TIGR00355
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS; SSF53927 Cytidine_deaminase-like; SSF52335 MGS-like_dom
EC number: =2.1.2.3; =3.5.4.10
Molecular weight: Translated: 59423; Mature: 59291
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNNIIKNALVSLSDKTDLLKISKILAEKKINLFCTGGTADVLKKNKIPVLEISDYTNF CCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCEEEECCCCCC PEIMNGRLKTLHPKIIGGILGRREKDQKIMKLHNLIPIDIVIVNFYPFEKIQNRKEFTIE HHHHCCCHHHCCHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEECCCHHHHCCCCCCCHH EIIDNIDIGGPTLVRAAAKNYKDVIVIVDLSDFTSCIQLINTNTVSLETRFDLATKAFKY HHHHCCCCCCHHHHHHHHCCCCEEEEEEECHHHHHHHHHHCCCEEEEEEHHHHHHHHHHH TALYEEIISKYFLKKNPYRKKHQKNIFPNEFQLNFIKKQDLRYGENQHQKSSFYIEKEIL HHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEEHHCCCCCCCCCCCCHHEEEHHHH KSGTISSSNQIQGKNLSYNNICDADIALECVKEFSKPTCVIVKHGNPCGVSESNSLIKAY HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHH FSAYNADPISAFGGIIAFNCLLDLDTAQEIVKKQFVEVIIAPEIDEMAVKILKRKKNIRL HHHCCCCHHHHHHHHHHHHHHEECHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCEEE LICGKIEKNKKGLDFKRITNGLLIQEYDCDEINAKNFDFVTNRLPTEKELEDAIFSWKVA EEEECCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHH KFVKSNAIVYSLNKTTIGIGAGQTSRIDATKLANLKVKDRNHNNTTGATMASDAFFPFRD HHHHCCEEEEEECCEEEEECCCCCCCCCHHHEEEEEEECCCCCCCCCCEEECCCCCCHHC GIDNAALIGISCIIQPGGSIRDKEVIESANEHNISMIFTKKRHFKH CCCCCEEEEEEEEECCCCCCCHHHHHHCCCCCCEEEEEECCCCCCC >Mature Secondary Structure SLNNIIKNALVSLSDKTDLLKISKILAEKKINLFCTGGTADVLKKNKIPVLEISDYTNF CHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCEEEECCCCCC PEIMNGRLKTLHPKIIGGILGRREKDQKIMKLHNLIPIDIVIVNFYPFEKIQNRKEFTIE HHHHCCCHHHCCHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEECCCHHHHCCCCCCCHH EIIDNIDIGGPTLVRAAAKNYKDVIVIVDLSDFTSCIQLINTNTVSLETRFDLATKAFKY HHHHCCCCCCHHHHHHHHCCCCEEEEEEECHHHHHHHHHHCCCEEEEEEHHHHHHHHHHH TALYEEIISKYFLKKNPYRKKHQKNIFPNEFQLNFIKKQDLRYGENQHQKSSFYIEKEIL HHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEEHHCCCCCCCCCCCCHHEEEHHHH KSGTISSSNQIQGKNLSYNNICDADIALECVKEFSKPTCVIVKHGNPCGVSESNSLIKAY HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHH FSAYNADPISAFGGIIAFNCLLDLDTAQEIVKKQFVEVIIAPEIDEMAVKILKRKKNIRL HHHCCCCHHHHHHHHHHHHHHEECHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCEEE LICGKIEKNKKGLDFKRITNGLLIQEYDCDEINAKNFDFVTNRLPTEKELEDAIFSWKVA EEEECCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHH KFVKSNAIVYSLNKTTIGIGAGQTSRIDATKLANLKVKDRNHNNTTGATMASDAFFPFRD HHHHCCEEEEEECCEEEEECCCCCCCCCHHHEEEEEEECCCCCCCCCCEEECCCCCCHHC GIDNAALIGISCIIQPGGSIRDKEVIESANEHNISMIFTKKRHFKH CCCCCEEEEEEEEECCCCCCCHHHHHHCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438