| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is pip [H]
Identifier: 213693294
GI number: 213693294
Start: 2749505
End: 2752261
Strand: Direct
Name: pip [H]
Synonym: Blon_2448
Alternate gene names: 213693294
Gene position: 2749505-2752261 (Clockwise)
Preceding gene: 213693293
Following gene: 213693295
Centisome position: 97.06
GC content: 58.22
Gene sequence:
>2757_bases ATGCGGACAGTTTGGCAAGTCTTTCTGCGCGATTGCAGACGTATCTTACGCAATCCCGTTGCCGTTGTGGTGACGCTCGG CGTAGCAATACTGCCCTCGCTGTACGCATGGTTCAATATTCTTGCCAACTGGGATCCCTATTCAGCCACCGGCAATCTGC AAGTGGCCGTAGCCAATGAAGACCAAGGCACCACCAACGATCTGGTCGGCCATCTCGATGCGGGCCGGCAGGTCGTCAAG AAACTCAAGCAGAACGACGAACTCGGCTGGCGCTTCGTAGACAATGAGGAGCAGGCCGTACACGGCGTGGAGACCGGCGA ATACTATGCAGCCATCGTGCTGCCCAAGGATTTCAGTGCCATCTTGGTCGAATCGGTGACCGGAACCTCCAAACAGCCGA AAATCAAGTATTACGTCAATGAGAAGAAGAACGCGATCGCGCCGAAAATCACCGACACCGGTGCCACCACCATCGATGAG CAGATCAACTCCGCCTTCGTCACCACGGTAGCCACCACCGTTGCCTCGGCCGTTTCCGAAGCGGGAGACGATCTCGACCA AGTCACCGGCAAAGTCCAGCACGATACGATCGATGATCTCAATACGGTGATGTCCACGCTGAACACCGTTCAGGATTCAC TCACCGACTTACAGGACACGCTGGCCCAGTCAGACACGATTCTCGCCGACGCCAAACAGACCACCGCCTCACTCAAGCAG ACCGTCGCGGCCGCGCAGAAGGCCTCCCGCCAGTCCGGCACACTGTTGGCGGAAACACAGGCCGGGTCACAAGCCTTCTC CACCACACTGGTCGGCGCGCTCGACACCAGCTCAGCGCAACTCTCCGGACTGGCCGTTCACGTCAACAACGCCGCCGGCA GCATCACCGGCTCCTTCAACAGCGCGCAGAACTCCGTCGACACCATCACCAACACACTTTCGGCTCCACTGAACGCCACC CAAACGTCAATCAGCGATCTGAAAAACGCGCTGACCAAAGCCGGCATCGGCAAAGACACCACCGACCCGGCCGGCCAGAA CATCTGGAAACAAATCGATGCGCTCGACTCATTGATCAGCAAACAGCAGACACAGCTCAACACCTTCCATACCGACACCA CACAGTTCATCAACTCCGGCAAAGACGCCACCACGAATCTTTCCGGAGCCATGACCAACACCACCACCGGCGGCATCGCG GCGCTGAATACCGCGCGCGGCTCGCTGACCGGCACCGTGATGCCATCGCTCACCTCATCATTGAACAGTTTCGCCGCCCT GAACGGCACGCTGGATGGCACGTTGACTTCGTTGTCCGGCACCTTGGATCAGGCCGACGGGCTGTTCGACCAGCTTGTCG ATACCCTGAACCAAACGAAAACCACCATCAGCAGCACGCAGGATTCGCTGCGCCAGGTGGCCAGCGATGTCGCCACCGTA CGCACCGATATCGCCACGCTCGATAGTTCCGCCGCTTACCAGAAAATCCGGGATACGCTGCATCTGGATGACAAGGGATT CGGCGAGTTCATGGGCAATCCCGTCACTCTGGCCACGAAAGTCGTGTATGCCACCGACAATTACGGGTCCGCAGTCACCC CGTTCTACACGAATCTGGCACTGTGGGTAGGCGGTTTCGTGCTGATTGCCATCTACAAGCTTGAGGTCGACCGCAAGGGC ATTCGCCGTATCACCGCTACGCAAGCATATCTTGGCCGCTGGCTGTTGCTGGTCACCATCGGATTCCTGCAAGCCGTCAT CGCCACCATCGGCGATCTGGTGCTCGGCATCCAATGCGAGCATCCGCTGCTGTTCATCTTGGCCGGAATCTTCTGTTCGT TCGTCTACATCAACATTATTTATGCACTGGCCGTGGCATTCCGCCATATCGGCAAAGCCATCGCCGTAATTCTGGTCATT GTGCAGATACCCGGTGCCTCCGGCCTGTATCCGATTGAAATGATGCCGAACTTCTTCCGCGAACTGCACCCGTGGCTGCC CTTTACCTACGGCATCAACGCGATGCGCGGCCCGATCGCCGGCCTGTACGCGAACCATTACTGGCTCGACATGCTGCACC TGTTCTGGTATCTGCCGGCGGCGCTTTTCGTGGGACTTGTCGTACGCCGGTATGCGATGAACCTGAACGCGCTGTTCGAC CGTCGTTTGGGAGATACCGACCTGATGATCACCGAGCACAACAGCATGGTGAACGAACAGGTGAGCTTGAACTCCGTATT CCGCACGGTGTCCGACAGCAAGGAACTGCGCGATATCATCGCCCATCGCGCGCACCGGTTCTTCGCACGGTACCCAAAGA TGATCGTTGCCGGCCTGGCATTGCTGACCGTACTCCCGTTCGTATTCCTGGTGCTGCTGTTTGTCACCCAAGAGAAAATC GCCATGCTGACCTCCTGGATTCTGTCGATTATTCTTATCGACGCCTATCTCATTGTGGTTGAATACGCACGCGAAACCTA CGCCGTGCAGCTTGGCGTCAGCGCCATGAGTGCCGACGAGTTCCGCAATGTGATGCTCAACGGATATGTGTGGCGGCGTT TCCACGGCCACGGACGTCACGAAGCGGCGATGGACAGCGATCCGGATATCGGCGAAACCACTGAACGACTCACACTGTTC GGCGATCAGGCCGCCGAGCCGACTGCGCACACCGCACAGTCCGAGCAGTCCGGTCAATCCGGGCAGCCTGAGCAACCCGG TCAGTCCGGGCAGCCTGAGCAAGGAGACGCACGATGA
Upstream 100 bases:
>100_bases AGCTTTGCAAGAAAACCCGCCAAACCAGCAGTATCCGCACCAGTGGTGGGAATAGACTGCATGTGGCCGCAATGACTACG AACCGGAAAAGAGGGACTGG
Downstream 100 bases:
>100_bases AGCTTATCTGGAAAATATTCGTACGTGACGTGCGCCAAGCCACCCGCAATGTGATCGCCGTAATCGTGGCTATGGGATTG GTGATTGTGCCGGCACTGTA
Product: ABC-2 type transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 918; Mature: 918
Protein sequence:
>918_residues MRTVWQVFLRDCRRILRNPVAVVVTLGVAILPSLYAWFNILANWDPYSATGNLQVAVANEDQGTTNDLVGHLDAGRQVVK KLKQNDELGWRFVDNEEQAVHGVETGEYYAAIVLPKDFSAILVESVTGTSKQPKIKYYVNEKKNAIAPKITDTGATTIDE QINSAFVTTVATTVASAVSEAGDDLDQVTGKVQHDTIDDLNTVMSTLNTVQDSLTDLQDTLAQSDTILADAKQTTASLKQ TVAAAQKASRQSGTLLAETQAGSQAFSTTLVGALDTSSAQLSGLAVHVNNAAGSITGSFNSAQNSVDTITNTLSAPLNAT QTSISDLKNALTKAGIGKDTTDPAGQNIWKQIDALDSLISKQQTQLNTFHTDTTQFINSGKDATTNLSGAMTNTTTGGIA ALNTARGSLTGTVMPSLTSSLNSFAALNGTLDGTLTSLSGTLDQADGLFDQLVDTLNQTKTTISSTQDSLRQVASDVATV RTDIATLDSSAAYQKIRDTLHLDDKGFGEFMGNPVTLATKVVYATDNYGSAVTPFYTNLALWVGGFVLIAIYKLEVDRKG IRRITATQAYLGRWLLLVTIGFLQAVIATIGDLVLGIQCEHPLLFILAGIFCSFVYINIIYALAVAFRHIGKAIAVILVI VQIPGASGLYPIEMMPNFFRELHPWLPFTYGINAMRGPIAGLYANHYWLDMLHLFWYLPAALFVGLVVRRYAMNLNALFD RRLGDTDLMITEHNSMVNEQVSLNSVFRTVSDSKELRDIIAHRAHRFFARYPKMIVAGLALLTVLPFVFLVLLFVTQEKI AMLTSWILSIILIDAYLIVVEYARETYAVQLGVSAMSADEFRNVMLNGYVWRRFHGHGRHEAAMDSDPDIGETTERLTLF GDQAAEPTAHTAQSEQSGQSGQPEQPGQSGQPEQGDAR
Sequences:
>Translated_918_residues MRTVWQVFLRDCRRILRNPVAVVVTLGVAILPSLYAWFNILANWDPYSATGNLQVAVANEDQGTTNDLVGHLDAGRQVVK KLKQNDELGWRFVDNEEQAVHGVETGEYYAAIVLPKDFSAILVESVTGTSKQPKIKYYVNEKKNAIAPKITDTGATTIDE QINSAFVTTVATTVASAVSEAGDDLDQVTGKVQHDTIDDLNTVMSTLNTVQDSLTDLQDTLAQSDTILADAKQTTASLKQ TVAAAQKASRQSGTLLAETQAGSQAFSTTLVGALDTSSAQLSGLAVHVNNAAGSITGSFNSAQNSVDTITNTLSAPLNAT QTSISDLKNALTKAGIGKDTTDPAGQNIWKQIDALDSLISKQQTQLNTFHTDTTQFINSGKDATTNLSGAMTNTTTGGIA ALNTARGSLTGTVMPSLTSSLNSFAALNGTLDGTLTSLSGTLDQADGLFDQLVDTLNQTKTTISSTQDSLRQVASDVATV RTDIATLDSSAAYQKIRDTLHLDDKGFGEFMGNPVTLATKVVYATDNYGSAVTPFYTNLALWVGGFVLIAIYKLEVDRKG IRRITATQAYLGRWLLLVTIGFLQAVIATIGDLVLGIQCEHPLLFILAGIFCSFVYINIIYALAVAFRHIGKAIAVILVI VQIPGASGLYPIEMMPNFFRELHPWLPFTYGINAMRGPIAGLYANHYWLDMLHLFWYLPAALFVGLVVRRYAMNLNALFD RRLGDTDLMITEHNSMVNEQVSLNSVFRTVSDSKELRDIIAHRAHRFFARYPKMIVAGLALLTVLPFVFLVLLFVTQEKI AMLTSWILSIILIDAYLIVVEYARETYAVQLGVSAMSADEFRNVMLNGYVWRRFHGHGRHEAAMDSDPDIGETTERLTLF GDQAAEPTAHTAQSEQSGQSGQPEQPGQSGQPEQGDAR >Mature_918_residues MRTVWQVFLRDCRRILRNPVAVVVTLGVAILPSLYAWFNILANWDPYSATGNLQVAVANEDQGTTNDLVGHLDAGRQVVK KLKQNDELGWRFVDNEEQAVHGVETGEYYAAIVLPKDFSAILVESVTGTSKQPKIKYYVNEKKNAIAPKITDTGATTIDE QINSAFVTTVATTVASAVSEAGDDLDQVTGKVQHDTIDDLNTVMSTLNTVQDSLTDLQDTLAQSDTILADAKQTTASLKQ TVAAAQKASRQSGTLLAETQAGSQAFSTTLVGALDTSSAQLSGLAVHVNNAAGSITGSFNSAQNSVDTITNTLSAPLNAT QTSISDLKNALTKAGIGKDTTDPAGQNIWKQIDALDSLISKQQTQLNTFHTDTTQFINSGKDATTNLSGAMTNTTTGGIA ALNTARGSLTGTVMPSLTSSLNSFAALNGTLDGTLTSLSGTLDQADGLFDQLVDTLNQTKTTISSTQDSLRQVASDVATV RTDIATLDSSAAYQKIRDTLHLDDKGFGEFMGNPVTLATKVVYATDNYGSAVTPFYTNLALWVGGFVLIAIYKLEVDRKG IRRITATQAYLGRWLLLVTIGFLQAVIATIGDLVLGIQCEHPLLFILAGIFCSFVYINIIYALAVAFRHIGKAIAVILVI VQIPGASGLYPIEMMPNFFRELHPWLPFTYGINAMRGPIAGLYANHYWLDMLHLFWYLPAALFVGLVVRRYAMNLNALFD RRLGDTDLMITEHNSMVNEQVSLNSVFRTVSDSKELRDIIAHRAHRFFARYPKMIVAGLALLTVLPFVFLVLLFVTQEKI AMLTSWILSIILIDAYLIVVEYARETYAVQLGVSAMSADEFRNVMLNGYVWRRFHGHGRHEAAMDSDPDIGETTERLTLF GDQAAEPTAHTAQSEQSGQSGQPEQPGQSGQPEQGDAR
Specific function: Required for phage infection [H]
COG id: COG1511
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013525 - InterPro: IPR017501 - InterPro: IPR017500 [H]
Pfam domain/function: PF01061 ABC2_membrane [H]
EC number: NA
Molecular weight: Translated: 99584; Mature: 99584
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTVWQVFLRDCRRILRNPVAVVVTLGVAILPSLYAWFNILANWDPYSATGNLQVAVANE CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC DQGTTNDLVGHLDAGRQVVKKLKQNDELGWRFVDNEEQAVHGVETGEYYAAIVLPKDFSA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCCCCEEEEEEECCCHHH ILVESVTGTSKQPKIKYYVNEKKNAIAPKITDTGATTIDEQINSAFVTTVATTVASAVSE HHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AGDDLDQVTGKVQHDTIDDLNTVMSTLNTVQDSLTDLQDTLAQSDTILADAKQTTASLKQ HCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH TVAAAQKASRQSGTLLAETQAGSQAFSTTLVGALDTSSAQLSGLAVHVNNAAGSITGSFN HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCHHCEEEEEEECCCCCEECCCC SAQNSVDTITNTLSAPLNATQTSISDLKNALTKAGIGKDTTDPAGQNIWKQIDALDSLIS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH KQQTQLNTFHTDTTQFINSGKDATTNLSGAMTNTTTGGIAALNTARGSLTGTVMPSLTSS HHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHH LNSFAALNGTLDGTLTSLSGTLDQADGLFDQLVDTLNQTKTTISSTQDSLRQVASDVATV HHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTDIATLDSSAAYQKIRDTLHLDDKGFGEFMGNPVTLATKVVYATDNYGSAVTPFYTNLA HHHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCEEEEEEEEEEECCCCCCCCHHHHHHH LWVGGFVLIAIYKLEVDRKGIRRITATQAYLGRWLLLVTIGFLQAVIATIGDLVLGIQCE HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC HPLLFILAGIFCSFVYINIIYALAVAFRHIGKAIAVILVIVQIPGASGLYPIEMMPNFFR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHH ELHPWLPFTYGINAMRGPIAGLYANHYWLDMLHLFWYLPAALFVGLVVRRYAMNLNALFD HHCCCCCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRLGDTDLMITEHNSMVNEQVSLNSVFRTVSDSKELRDIIAHRAHRFFARYPKMIVAGLA HCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLTVLPFVFLVLLFVTQEKIAMLTSWILSIILIDAYLIVVEYARETYAVQLGVSAMSADE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHH FRNVMLNGYVWRRFHGHGRHEAAMDSDPDIGETTERLTLFGDQAAEPTAHTAQSEQSGQS HHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCHHHCCCCCCCCC GQPEQPGQSGQPEQGDAR CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRTVWQVFLRDCRRILRNPVAVVVTLGVAILPSLYAWFNILANWDPYSATGNLQVAVANE CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC DQGTTNDLVGHLDAGRQVVKKLKQNDELGWRFVDNEEQAVHGVETGEYYAAIVLPKDFSA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCCCCEEEEEEECCCHHH ILVESVTGTSKQPKIKYYVNEKKNAIAPKITDTGATTIDEQINSAFVTTVATTVASAVSE HHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AGDDLDQVTGKVQHDTIDDLNTVMSTLNTVQDSLTDLQDTLAQSDTILADAKQTTASLKQ HCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH TVAAAQKASRQSGTLLAETQAGSQAFSTTLVGALDTSSAQLSGLAVHVNNAAGSITGSFN HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCHHCEEEEEEECCCCCEECCCC SAQNSVDTITNTLSAPLNATQTSISDLKNALTKAGIGKDTTDPAGQNIWKQIDALDSLIS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH KQQTQLNTFHTDTTQFINSGKDATTNLSGAMTNTTTGGIAALNTARGSLTGTVMPSLTSS HHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHH LNSFAALNGTLDGTLTSLSGTLDQADGLFDQLVDTLNQTKTTISSTQDSLRQVASDVATV HHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTDIATLDSSAAYQKIRDTLHLDDKGFGEFMGNPVTLATKVVYATDNYGSAVTPFYTNLA HHHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCEEEEEEEEEEECCCCCCCCHHHHHHH LWVGGFVLIAIYKLEVDRKGIRRITATQAYLGRWLLLVTIGFLQAVIATIGDLVLGIQCE HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC HPLLFILAGIFCSFVYINIIYALAVAFRHIGKAIAVILVIVQIPGASGLYPIEMMPNFFR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHH ELHPWLPFTYGINAMRGPIAGLYANHYWLDMLHLFWYLPAALFVGLVVRRYAMNLNALFD HHCCCCCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRLGDTDLMITEHNSMVNEQVSLNSVFRTVSDSKELRDIIAHRAHRFFARYPKMIVAGLA HCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLTVLPFVFLVLLFVTQEKIAMLTSWILSIILIDAYLIVVEYARETYAVQLGVSAMSADE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHH FRNVMLNGYVWRRFHGHGRHEAAMDSDPDIGETTERLTLFGDQAAEPTAHTAQSEQSGQS HHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCHHHCCCCCCCCC GQPEQPGQSGQPEQGDAR CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8366036 [H]