| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is pip [H]
Identifier: 213693295
GI number: 213693295
Start: 2752258
End: 2754597
Strand: Direct
Name: pip [H]
Synonym: Blon_2449
Alternate gene names: 213693295
Gene position: 2752258-2754597 (Clockwise)
Preceding gene: 213693294
Following gene: 213693297
Centisome position: 97.16
GC content: 56.92
Gene sequence:
>2340_bases ATGAAGCTTATCTGGAAAATATTCGTACGTGACGTGCGCCAAGCCACCCGCAATGTGATCGCCGTAATCGTGGCTATGGG ATTGGTGATTGTGCCGGCACTGTACGCCTGGTACAACATCGCCGCCAGCTGGGACCCGTACGGCAACACCAAGGCCTTGA AGGTCGCCGTGGCAAACGTGGATAAGGGCTATAAGTCCGATCTGATGCCGATCACCATCAACGTCGGCGAAACCGTGACC AATACGCTCAGGGCCAATCATGACCTTGACTGGCAGTTTGTGGATCGTGCTAAGGCCATCGATGGCGTGAACTCAGGCGA ATACTATGCCGCGCTGATTATTCCAAAGAGCTTCAGCTCCGATATGATGACGCTGTTTTCACCGAAGATCAAGCACGCCA AGCTCGAATACTATCTCAATGAGAAAATCAATCCAATCGCTCCGCATATCACCGACCAGGGTGCTACCACCGTGGCCACG ACCATCGACCAGACATTCGTGAAGACCTTGGCGAGCGTGGCGCTGGATTTGGTTTCCAACGTGGCCGATTACGCGCAAAG CCCGCAAATGGAGCAGTACGTCAACAACGCCACCAGTCATATTGCTACCATGTCGTCTCGTTCGACCGGCACTGCGTCGC AGATGGATTCCTATGCCAATCTGCTCGGGGCCGCCAACAGCATCATTGATTCCACCGATAAGCTGCTGGGGTCAACAGGC TCAGCTGCGGCCACAACCAAAAAGGCGTTGAAACAGACCCGCAACGGCGTCTCCAGCCTCGACAAGGCATTGTCCGGAGC CACCGATGGCGTCGGTACGGCATTGCAGCAGGCCGGTTCATCCTACGACACCATTGCCAAGCAAATCGATGCCGCTTTTG CCGATGTGGGCTCACAATCCTCACAGATATCAAACAAACTAACCGATATGCAATCCAAAGTGGAGGCTCAGGCCGACAGC TTTGGAAAGTATGCCGCCGCTTTACGAGATCTCGCCAAACAAGCGGCTTCACTGCCCGTGGGCGGAGATACCGTTGCCGC TCAACTGAACGCGGCTGCAGACCAAGCCACAAAGGCGCAGCAGAGCATGCAGCAAGCCGCCACCGCGTTGGGCGATGCGG CCACGCACATAGCAAACGGCACTGCCGATGCCGATACAGCGCGTCGAGATCTGAAATCACAAATCGCCGCCGCCAAACAA TCGATTACTCAGGCTTCAGACACGTACAAGAGCACGCTGAAACCGCAACTGAACAATCTGACCTCGTCCATGGACGAAGT GGCCACGCAGGCAAGTTCCGTAATCGACGGGCTTGCGTCGACCGTCAGCAGCGTGTCAGGTCTTTCTGGCGGCGTTTCAG ACAGCCTGACGGACATCCAGTCGGCCTTGACTAACGCAGCTAACGCTTTGACCCGTTCGGCGAAGAAACTCGACAACTTG TCTTCCCAACTCGCCTCTATCACCAGTGGCGGCACCAACGACCTGTCTGTGATTTCCTCTGCGAAGCCCGATGCCATTGC TTCCATGCTGGCGGCACCCGTAGCGGTCGACCGCATCGCGCTCTATCCCGTTGCCAACTATGGTTCCGCGATGGCTCCGT TCTACACGATTTTGTCTATTTGGGTCGGTGCGATCATTCTGGTCGCCATGTTGAAAGTATCGATTTCCGACCATGAGAAG GCTCGTATCTTAGGGCTGGGCAATGATCTGCCGCTCGGTTCGGGAGTGGGTCTTCGCGAGGCCATGATTGCCGGGCGGAT TGCTGGACCGGCCGCCGCGTTGGATGTGCTGAAGAAGCCGCGTGCCGAGTCTTCCGGCAATGCGCGGCAGTTCGGTTTAC GCTTGCACCACGAATATTTCGGCCGATACATGATTTTCGGTTTCCTTGCTTTGCTGCAGGGCACGCTGGTCTGCCTCGGC GACATGTTCTACCTCGGCGTGCAGTGCGAGCACCCGATCCGGTTCATGATGGTCGGCTGGCTGACCGCGCTGGTGTTCTC GAACATCGTGTACACGTTGGCCCTGTCGTTCGGCGATATCGGCAAAGCCATCGCCGTGGTGCTGCTGGTGATGCAGGTGG CCGGTTCCGGTGGCACGTTCCCCATCGAGACGTTGCCCCCGTTCTTCCAGGCCGTTTCCAAATGGCTGCTGTTCCCCTAT GCGGTGGACGCGATGCACTCGGCCATGGCCGGCTCGTTCGGCATGGAGTATTGGGTTTCCATGGGCAAACTCGCGTTGTT CCTTGTTCCTTCGCTGCTTCTGGGGCTTATGCTGCGCAAGCCGGTGATCCGCCTGAACGATTGGATCATCCGCAATCTGG AAAGCACCAAGGTGATGTAA
Upstream 100 bases:
>100_bases CCGAGCCGACTGCGCACACCGCACAGTCCGAGCAGTCCGGTCAATCCGGGCAGCCTGAGCAACCCGGTCAGTCCGGGCAG CCTGAGCAAGGAGACGCACG
Downstream 100 bases:
>100_bases GTGTTGGACGGAGTGTGTCCGAGCGCCCTGAACGCTTAGCAGCCTACGACCTGGCGTGTTTGGACCGTAACCTGTCTCAG ACACGGCGTTGGCGAGGCCT
Product: ABC-2 type transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 779; Mature: 779
Protein sequence:
>779_residues MKLIWKIFVRDVRQATRNVIAVIVAMGLVIVPALYAWYNIAASWDPYGNTKALKVAVANVDKGYKSDLMPITINVGETVT NTLRANHDLDWQFVDRAKAIDGVNSGEYYAALIIPKSFSSDMMTLFSPKIKHAKLEYYLNEKINPIAPHITDQGATTVAT TIDQTFVKTLASVALDLVSNVADYAQSPQMEQYVNNATSHIATMSSRSTGTASQMDSYANLLGAANSIIDSTDKLLGSTG SAAATTKKALKQTRNGVSSLDKALSGATDGVGTALQQAGSSYDTIAKQIDAAFADVGSQSSQISNKLTDMQSKVEAQADS FGKYAAALRDLAKQAASLPVGGDTVAAQLNAAADQATKAQQSMQQAATALGDAATHIANGTADADTARRDLKSQIAAAKQ SITQASDTYKSTLKPQLNNLTSSMDEVATQASSVIDGLASTVSSVSGLSGGVSDSLTDIQSALTNAANALTRSAKKLDNL SSQLASITSGGTNDLSVISSAKPDAIASMLAAPVAVDRIALYPVANYGSAMAPFYTILSIWVGAIILVAMLKVSISDHEK ARILGLGNDLPLGSGVGLREAMIAGRIAGPAAALDVLKKPRAESSGNARQFGLRLHHEYFGRYMIFGFLALLQGTLVCLG DMFYLGVQCEHPIRFMMVGWLTALVFSNIVYTLALSFGDIGKAIAVVLLVMQVAGSGGTFPIETLPPFFQAVSKWLLFPY AVDAMHSAMAGSFGMEYWVSMGKLALFLVPSLLLGLMLRKPVIRLNDWIIRNLESTKVM
Sequences:
>Translated_779_residues MKLIWKIFVRDVRQATRNVIAVIVAMGLVIVPALYAWYNIAASWDPYGNTKALKVAVANVDKGYKSDLMPITINVGETVT NTLRANHDLDWQFVDRAKAIDGVNSGEYYAALIIPKSFSSDMMTLFSPKIKHAKLEYYLNEKINPIAPHITDQGATTVAT TIDQTFVKTLASVALDLVSNVADYAQSPQMEQYVNNATSHIATMSSRSTGTASQMDSYANLLGAANSIIDSTDKLLGSTG SAAATTKKALKQTRNGVSSLDKALSGATDGVGTALQQAGSSYDTIAKQIDAAFADVGSQSSQISNKLTDMQSKVEAQADS FGKYAAALRDLAKQAASLPVGGDTVAAQLNAAADQATKAQQSMQQAATALGDAATHIANGTADADTARRDLKSQIAAAKQ SITQASDTYKSTLKPQLNNLTSSMDEVATQASSVIDGLASTVSSVSGLSGGVSDSLTDIQSALTNAANALTRSAKKLDNL SSQLASITSGGTNDLSVISSAKPDAIASMLAAPVAVDRIALYPVANYGSAMAPFYTILSIWVGAIILVAMLKVSISDHEK ARILGLGNDLPLGSGVGLREAMIAGRIAGPAAALDVLKKPRAESSGNARQFGLRLHHEYFGRYMIFGFLALLQGTLVCLG DMFYLGVQCEHPIRFMMVGWLTALVFSNIVYTLALSFGDIGKAIAVVLLVMQVAGSGGTFPIETLPPFFQAVSKWLLFPY AVDAMHSAMAGSFGMEYWVSMGKLALFLVPSLLLGLMLRKPVIRLNDWIIRNLESTKVM >Mature_779_residues MKLIWKIFVRDVRQATRNVIAVIVAMGLVIVPALYAWYNIAASWDPYGNTKALKVAVANVDKGYKSDLMPITINVGETVT NTLRANHDLDWQFVDRAKAIDGVNSGEYYAALIIPKSFSSDMMTLFSPKIKHAKLEYYLNEKINPIAPHITDQGATTVAT TIDQTFVKTLASVALDLVSNVADYAQSPQMEQYVNNATSHIATMSSRSTGTASQMDSYANLLGAANSIIDSTDKLLGSTG SAAATTKKALKQTRNGVSSLDKALSGATDGVGTALQQAGSSYDTIAKQIDAAFADVGSQSSQISNKLTDMQSKVEAQADS FGKYAAALRDLAKQAASLPVGGDTVAAQLNAAADQATKAQQSMQQAATALGDAATHIANGTADADTARRDLKSQIAAAKQ SITQASDTYKSTLKPQLNNLTSSMDEVATQASSVIDGLASTVSSVSGLSGGVSDSLTDIQSALTNAANALTRSAKKLDNL SSQLASITSGGTNDLSVISSAKPDAIASMLAAPVAVDRIALYPVANYGSAMAPFYTILSIWVGAIILVAMLKVSISDHEK ARILGLGNDLPLGSGVGLREAMIAGRIAGPAAALDVLKKPRAESSGNARQFGLRLHHEYFGRYMIFGFLALLQGTLVCLG DMFYLGVQCEHPIRFMMVGWLTALVFSNIVYTLALSFGDIGKAIAVVLLVMQVAGSGGTFPIETLPPFFQAVSKWLLFPY AVDAMHSAMAGSFGMEYWVSMGKLALFLVPSLLLGLMLRKPVIRLNDWIIRNLESTKVM
Specific function: Required for phage infection [H]
COG id: COG1511
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013525 - InterPro: IPR017501 - InterPro: IPR017500 [H]
Pfam domain/function: PF01061 ABC2_membrane [H]
EC number: NA
Molecular weight: Translated: 82484; Mature: 82484
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIWKIFVRDVRQATRNVIAVIVAMGLVIVPALYAWYNIAASWDPYGNTKALKVAVANV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC DKGYKSDLMPITINVGETVTNTLRANHDLDWQFVDRAKAIDGVNSGEYYAALIIPKSFSS CCCCCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCC DMMTLFSPKIKHAKLEYYLNEKINPIAPHITDQGATTVATTIDQTFVKTLASVALDLVSN HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VADYAQSPQMEQYVNNATSHIATMSSRSTGTASQMDSYANLLGAANSIIDSTDKLLGSTG HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SAAATTKKALKQTRNGVSSLDKALSGATDGVGTALQQAGSSYDTIAKQIDAAFADVGSQS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCH SQISNKLTDMQSKVEAQADSFGKYAAALRDLAKQAASLPVGGDTVAAQLNAAADQATKAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH QSMQQAATALGDAATHIANGTADADTARRDLKSQIAAAKQSITQASDTYKSTLKPQLNNL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH TSSMDEVATQASSVIDGLASTVSSVSGLSGGVSDSLTDIQSALTNAANALTRSAKKLDNL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSQLASITSGGTNDLSVISSAKPDAIASMLAAPVAVDRIALYPVANYGSAMAPFYTILSI HHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH WVGAIILVAMLKVSISDHEKARILGLGNDLPLGSGVGLREAMIAGRIAGPAAALDVLKKP HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCC RAESSGNARQFGLRLHHEYFGRYMIFGFLALLQGTLVCLGDMFYLGVQCEHPIRFMMVGW CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LTALVFSNIVYTLALSFGDIGKAIAVVLLVMQVAGSGGTFPIETLPPFFQAVSKWLLFPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH AVDAMHSAMAGSFGMEYWVSMGKLALFLVPSLLLGLMLRKPVIRLNDWIIRNLESTKVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MKLIWKIFVRDVRQATRNVIAVIVAMGLVIVPALYAWYNIAASWDPYGNTKALKVAVANV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC DKGYKSDLMPITINVGETVTNTLRANHDLDWQFVDRAKAIDGVNSGEYYAALIIPKSFSS CCCCCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCC DMMTLFSPKIKHAKLEYYLNEKINPIAPHITDQGATTVATTIDQTFVKTLASVALDLVSN HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VADYAQSPQMEQYVNNATSHIATMSSRSTGTASQMDSYANLLGAANSIIDSTDKLLGSTG HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SAAATTKKALKQTRNGVSSLDKALSGATDGVGTALQQAGSSYDTIAKQIDAAFADVGSQS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCH SQISNKLTDMQSKVEAQADSFGKYAAALRDLAKQAASLPVGGDTVAAQLNAAADQATKAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH QSMQQAATALGDAATHIANGTADADTARRDLKSQIAAAKQSITQASDTYKSTLKPQLNNL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH TSSMDEVATQASSVIDGLASTVSSVSGLSGGVSDSLTDIQSALTNAANALTRSAKKLDNL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSQLASITSGGTNDLSVISSAKPDAIASMLAAPVAVDRIALYPVANYGSAMAPFYTILSI HHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH WVGAIILVAMLKVSISDHEKARILGLGNDLPLGSGVGLREAMIAGRIAGPAAALDVLKKP HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCC RAESSGNARQFGLRLHHEYFGRYMIFGFLALLQGTLVCLGDMFYLGVQCEHPIRFMMVGW CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LTALVFSNIVYTLALSFGDIGKAIAVVLLVMQVAGSGGTFPIETLPPFFQAVSKWLLFPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH AVDAMHSAMAGSFGMEYWVSMGKLALFLVPSLLLGLMLRKPVIRLNDWIIRNLESTKVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8366036 [H]