Click here to switch to the map view.

The map label for this gene is fucU [H]

Identifier: 213693155

GI number: 213693155

Start: 2558878

End: 2559324

Strand: Direct

Name: fucU [H]

Synonym: Blon_2305

Alternate gene names: 213693155

Gene position: 2558878-2559324 (Clockwise)

Preceding gene: 213693154

Following gene: 213693160

Centisome position: 90.33

GC content: 57.94

Gene sequence:

>447_bases
ATGCTCAAAGGTATTCCGAAAATCATCCCGCCGGAGCTGCTGAAAGTGCTGTGCGAGATGGGTCATGGCGATCAGCTGGT
CATCGCGGACGGCAACTTCCCAGCCGAATCAATCGGCAAGAACGCAATCGTGGTTCGTATGGACGGCCACGGTGGCGGCG
AGATCCTCAAAGCGATTCTGACGGTGTTCCCGCTTGACACGTATGTGGACAAGCCGGCGACGCTGATGGAAAAAGTGCCG
GGCGATACGGTTGCGACGCCGATCTGGGATGTGTACGCGGGCCTCATCAAGGAGCATGACGAACGCGGTGCGGATGCGAT
TGGATCGCTTGAGCGCTTCGCGTTCTATGAGCAGGCGAAGAACGCCTACTGTGTGATTGCCAGCGGCGAGTCGGCGCAGT
ACGCGAACCTAATCCTGCAGAAGGGAGTCGTCTTCAACGCGGAATAA

Upstream 100 bases:

>100_bases
TAAACTAGTAGCACATCGACGGTTGCGGGAATGCCCTGCGGCCACGATTGACGCCGTGGCGGGGTTGCCGCGGCGTCAAG
GCAACGAGCAAGGAGGCTTC

Downstream 100 bases:

>100_bases
CGCAAGATAACGCTTGACGGCGCTGACGGCACCGGAATATCAGCCGTCAGCCGCAGTACCTTTTACCAACACATACCGAT
ACGGCGAGAAAAGGGAGACC

Product: RbsD or FucU transport

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MLKGIPKIIPPELLKVLCEMGHGDQLVIADGNFPAESIGKNAIVVRMDGHGGGEILKAILTVFPLDTYVDKPATLMEKVP
GDTVATPIWDVYAGLIKEHDERGADAIGSLERFAFYEQAKNAYCVIASGESAQYANLILQKGVVFNAE

Sequences:

>Translated_148_residues
MLKGIPKIIPPELLKVLCEMGHGDQLVIADGNFPAESIGKNAIVVRMDGHGGGEILKAILTVFPLDTYVDKPATLMEKVP
GDTVATPIWDVYAGLIKEHDERGADAIGSLERFAFYEQAKNAYCVIASGESAQYANLILQKGVVFNAE
>Mature_148_residues
MLKGIPKIIPPELLKVLCEMGHGDQLVIADGNFPAESIGKNAIVVRMDGHGGGEILKAILTVFPLDTYVDKPATLMEKVP
GDTVATPIWDVYAGLIKEHDERGADAIGSLERFAFYEQAKNAYCVIASGESAQYANLILQKGVVFNAE

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=147, Percent_Identity=47.6190476190476, Blast_Score=141, Evalue=2e-34,
Organism=Homo sapiens, GI148596951, Length=132, Percent_Identity=45.4545454545455, Blast_Score=121, Evalue=2e-28,
Organism=Escherichia coli, GI1789169, Length=144, Percent_Identity=41.6666666666667, Blast_Score=112, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 15944; Mature: 15944

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGIPKIIPPELLKVLCEMGHGDQLVIADGNFPAESIGKNAIVVRMDGHGGGEILKAIL
CCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCEEEEEECCCCCHHHHHHHH
TVFPLDTYVDKPATLMEKVPGDTVATPIWDVYAGLIKEHDERGADAIGSLERFAFYEQAK
HHHCCHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
NAYCVIASGESAQYANLILQKGVVFNAE
CEEEEEECCCCHHHHHHHHHCCEEEECC
>Mature Secondary Structure
MLKGIPKIIPPELLKVLCEMGHGDQLVIADGNFPAESIGKNAIVVRMDGHGGGEILKAIL
CCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCEEEEEECCCCCHHHHHHHH
TVFPLDTYVDKPATLMEKVPGDTVATPIWDVYAGLIKEHDERGADAIGSLERFAFYEQAK
HHHCCHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
NAYCVIASGESAQYANLILQKGVVFNAE
CEEEEEECCCCHHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA