Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692996

Identifier: 213692996

GI number: 213692996

Start: 2368828

End: 2369241

Strand: Direct

Name: 213692996

Synonym: Blon_2143

Alternate gene names: NA

Gene position: 2368828-2369241 (Clockwise)

Preceding gene: 213692992

Following gene: 213693001

Centisome position: 83.62

GC content: 60.39

Gene sequence:

>414_bases
ATGGGTAAGCGACTGTGGGTTGAGCGCAACAAAGACGGTTCGTGGGATGCGTTCAGCGACGATGGCGCACACATTAAGTT
CGGCAAGGATCGCGGCCAGTTCACGCCGGGCGATCTGATGAAGGTCGCGCTGGCCGGTTGCGCCGCGCTGTCCAGCCAGT
TCGCCATCGAACATACGCTGGGTGAGGGCAAGGGTGCCAAGATTGTGGTGGATGGCACGTACGACCCTGAGAACGACGCC
TACACCGGTTTCGAGGAGCAGGTGGTGATTGATGCTTCCGACGCCGGTCTGTCCGAGGAGGATGCCGACAAGCTCAAAGA
GCGCGTCACCCGCCATATCGACAAGGGTTGCACGGTCAAGCACACCTACGTGCAGGAGACCCCGGTGCGCATGAACGTCA
CTGTCAAGCACTGA

Upstream 100 bases:

>100_bases
TAGAGAAGTCCAATGATGCGGGAGAGCGGCCAGGTGCCGCGCTCCCCCGCTGGCATGGCGATGGGCCAGATCGTCGGCGG
CTGAAAATAAAGGAGCAGCT

Downstream 100 bases:

>100_bases
AACGGGATATATACGGAAAGAGGCTCCCGCTGGCGGGAGCCTCTTTCCGTATATTCGGACTTTACTGGCGATCGGGATCG
ATGGTCTTCTCGATCTGCTG

Product: OsmC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MGKRLWVERNKDGSWDAFSDDGAHIKFGKDRGQFTPGDLMKVALAGCAALSSQFAIEHTLGEGKGAKIVVDGTYDPENDA
YTGFEEQVVIDASDAGLSEEDADKLKERVTRHIDKGCTVKHTYVQETPVRMNVTVKH

Sequences:

>Translated_137_residues
MGKRLWVERNKDGSWDAFSDDGAHIKFGKDRGQFTPGDLMKVALAGCAALSSQFAIEHTLGEGKGAKIVVDGTYDPENDA
YTGFEEQVVIDASDAGLSEEDADKLKERVTRHIDKGCTVKHTYVQETPVRMNVTVKH
>Mature_136_residues
GKRLWVERNKDGSWDAFSDDGAHIKFGKDRGQFTPGDLMKVALAGCAALSSQFAIEHTLGEGKGAKIVVDGTYDPENDAY
TGFEEQVVIDASDAGLSEEDADKLKERVTRHIDKGCTVKHTYVQETPVRMNVTVKH

Specific function: Unknown

COG id: COG1765

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR003718 [H]

Pfam domain/function: PF02566 OsmC [H]

EC number: NA

Molecular weight: Translated: 15057; Mature: 14926

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKRLWVERNKDGSWDAFSDDGAHIKFGKDRGQFTPGDLMKVALAGCAALSSQFAIEHTL
CCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEC
GEGKGAKIVVDGTYDPENDAYTGFEEQVVIDASDAGLSEEDADKLKERVTRHIDKGCTVK
CCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEE
HTYVQETPVRMNVTVKH
EEEECCCCEEEEEEEEC
>Mature Secondary Structure 
GKRLWVERNKDGSWDAFSDDGAHIKFGKDRGQFTPGDLMKVALAGCAALSSQFAIEHTL
CCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEC
GEGKGAKIVVDGTYDPENDAYTGFEEQVVIDASDAGLSEEDADKLKERVTRHIDKGCTVK
CCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEE
HTYVQETPVRMNVTVKH
EEEECCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]