Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213692928

Identifier: 213692928

GI number: 213692928

Start: 2288993

End: 2290165

Strand: Reverse

Name: 213692928

Synonym: Blon_2072

Alternate gene names: NA

Gene position: 2290165-2288993 (Counterclockwise)

Preceding gene: 213692929

Following gene: 213692927

Centisome position: 80.85

GC content: 61.38

Gene sequence:

>1173_bases
ATGCCCACCGTGCCGATTCCCGCACGCAAGGCTGCCACGACGTTCGACACCCCCTCCAAGCATGAGCGCATCGAGGTCAA
GCCGCCGATCACCCGATTCATACGTCGTGCCATCACCCGCGTGTTCGGCGTATGGTCACACATCTCCACTCAGGTGGTGC
GCCAATGGGGCTGGTATCCGCGAGTGGAACCCTATGTGGGTTATGGCACCGGCGATTACTCGCGCCTGATCTGCCGCACG
GTATACGCCCCCAAGCATGCGCAATCCGGCGAACTGATCCGCGGCATCCGCGGCATGCTTGCCGTGCCCGCGCCGCGCAC
CCACGTGCAGGCCAGCATTGATGACATGCCGCTGAACACCGTGCAGATCGGTGTCTCCGAGGTCTATGACAAGGTGGACC
GCACGCGCGATCTCGGCAGCGAATACGCCATCTCCGATTCCGCCGGATACCTCGACCTCGTGGCCGAGCATCGTCTGGTG
CCCGGCATCCATCGCGTCTCCTACAGCGTGGCCAACCGCAAACCCGTGAGCGCCAACCTGTACACCATCCCCGCCAGTGC
CAAAGTCGGCATCATCTCCGATGTGGACGACACCATCATGATCACGCAGGCCCCGGTGCCATGGAAGGCCGCGTACAACC
TGCTGTTCCTCGACCCCAAGAAGAAAGCCTCCGTGCCGGGCATGAGCGTGCTGTTCACCCGCATCGCCGACTTGTTCCCC
GGCGCACCGTTCTTCTATCTTTCGACATCGCCTTGGAATGTGGAGAGTTCGATTCGCAACTTCATCACTGACCATGGTTT
TCCCGAAGGCCCGCTGCTGCTGCGCGACCTCGACCCGAGGCCCAAGACCTTCGTGCCCACCGGCCCCCAGCACAAACTTG
AGTTTGCTGAACAACTTATGGCCGACTTCCCGGACATGAAGTTCATTCTGGTGGGCGATGACGGGCAGAAGGACCCGACC
ACGTACGCCACCATCGCCCGCAGATATCCCGGACGTGTACTGGCTATCGTCATTCGTGAGTTGAGCCCGCGCGAATCAAC
CGGATTGGCGTCGGTGACGGGGCTCACCTCGACCCAGCCGACTCCGGTAACCGATGTACCAGTATTCACCGGCACCACCG
GCTCGAACATTCTGAAGACCATGCTGCCGTATCTGAAGACGGTGTTGCGATAA

Upstream 100 bases:

>100_bases
TGCTCGCAATGCAGCGCTGTCCGCCACTGCGCCAGTCTCTGACGTCAAGGCATCCGCCAATGGCGCCGACAATGCCAGCA
ATGCTGAACATTCCGATGAC

Downstream 100 bases:

>100_bases
GCGCGGCGTGATGAACGCCGAATGCGTCCCGGTGTGGTGCCTCGCCTATAATCGCGTGGTATGACTGACGAGAGCACAAA
CGCCGCGGCCGCGATGCCGC

Product: narrowly conserved hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MPTVPIPARKAATTFDTPSKHERIEVKPPITRFIRRAITRVFGVWSHISTQVVRQWGWYPRVEPYVGYGTGDYSRLICRT
VYAPKHAQSGELIRGIRGMLAVPAPRTHVQASIDDMPLNTVQIGVSEVYDKVDRTRDLGSEYAISDSAGYLDLVAEHRLV
PGIHRVSYSVANRKPVSANLYTIPASAKVGIISDVDDTIMITQAPVPWKAAYNLLFLDPKKKASVPGMSVLFTRIADLFP
GAPFFYLSTSPWNVESSIRNFITDHGFPEGPLLLRDLDPRPKTFVPTGPQHKLEFAEQLMADFPDMKFILVGDDGQKDPT
TYATIARRYPGRVLAIVIRELSPRESTGLASVTGLTSTQPTPVTDVPVFTGTTGSNILKTMLPYLKTVLR

Sequences:

>Translated_390_residues
MPTVPIPARKAATTFDTPSKHERIEVKPPITRFIRRAITRVFGVWSHISTQVVRQWGWYPRVEPYVGYGTGDYSRLICRT
VYAPKHAQSGELIRGIRGMLAVPAPRTHVQASIDDMPLNTVQIGVSEVYDKVDRTRDLGSEYAISDSAGYLDLVAEHRLV
PGIHRVSYSVANRKPVSANLYTIPASAKVGIISDVDDTIMITQAPVPWKAAYNLLFLDPKKKASVPGMSVLFTRIADLFP
GAPFFYLSTSPWNVESSIRNFITDHGFPEGPLLLRDLDPRPKTFVPTGPQHKLEFAEQLMADFPDMKFILVGDDGQKDPT
TYATIARRYPGRVLAIVIRELSPRESTGLASVTGLTSTQPTPVTDVPVFTGTTGSNILKTMLPYLKTVLR
>Mature_389_residues
PTVPIPARKAATTFDTPSKHERIEVKPPITRFIRRAITRVFGVWSHISTQVVRQWGWYPRVEPYVGYGTGDYSRLICRTV
YAPKHAQSGELIRGIRGMLAVPAPRTHVQASIDDMPLNTVQIGVSEVYDKVDRTRDLGSEYAISDSAGYLDLVAEHRLVP
GIHRVSYSVANRKPVSANLYTIPASAKVGIISDVDDTIMITQAPVPWKAAYNLLFLDPKKKASVPGMSVLFTRIADLFPG
APFFYLSTSPWNVESSIRNFITDHGFPEGPLLLRDLDPRPKTFVPTGPQHKLEFAEQLMADFPDMKFILVGDDGQKDPTT
YATIARRYPGRVLAIVIRELSPRESTGLASVTGLTSTQPTPVTDVPVFTGTTGSNILKTMLPYLKTVLR

Specific function: Unknown

COG id: COG4850

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6324235, Length=219, Percent_Identity=29.2237442922374, Blast_Score=87, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43233; Mature: 43102

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTVPIPARKAATTFDTPSKHERIEVKPPITRFIRRAITRVFGVWSHISTQVVRQWGWYP
CCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RVEPYVGYGTGDYSRLICRTVYAPKHAQSGELIRGIRGMLAVPAPRTHVQASIDDMPLNT
CCCCEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHEECCCCCCCEEECCCCCCCCC
VQIGVSEVYDKVDRTRDLGSEYAISDSAGYLDLVAEHRLVPGIHRVSYSVANRKPVSANL
EEHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEE
YTIPASAKVGIISDVDDTIMITQAPVPWKAAYNLLFLDPKKKASVPGMSVLFTRIADLFP
EEECCCCCEEEEECCCCEEEEEECCCCHHHHCEEEEECCCHHCCCCCHHHHHHHHHHHCC
GAPFFYLSTSPWNVESSIRNFITDHGFPEGPLLLRDLDPRPKTFVPTGPQHKLEFAEQLM
CCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH
ADFPDMKFILVGDDGQKDPTTYATIARRYPGRVLAIVIRELSPRESTGLASVTGLTSTQP
HCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCEEECCCCCCCC
TPVTDVPVFTGTTGSNILKTMLPYLKTVLR
CCCCCCCEEECCCHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
PTVPIPARKAATTFDTPSKHERIEVKPPITRFIRRAITRVFGVWSHISTQVVRQWGWYP
CCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RVEPYVGYGTGDYSRLICRTVYAPKHAQSGELIRGIRGMLAVPAPRTHVQASIDDMPLNT
CCCCEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHEECCCCCCCEEECCCCCCCCC
VQIGVSEVYDKVDRTRDLGSEYAISDSAGYLDLVAEHRLVPGIHRVSYSVANRKPVSANL
EEHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEE
YTIPASAKVGIISDVDDTIMITQAPVPWKAAYNLLFLDPKKKASVPGMSVLFTRIADLFP
EEECCCCCEEEEECCCCEEEEEECCCCHHHHCEEEEECCCHHCCCCCHHHHHHHHHHHCC
GAPFFYLSTSPWNVESSIRNFITDHGFPEGPLLLRDLDPRPKTFVPTGPQHKLEFAEQLM
CCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH
ADFPDMKFILVGDDGQKDPTTYATIARRYPGRVLAIVIRELSPRESTGLASVTGLTSTQP
HCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCEEECCCCCCCC
TPVTDVPVFTGTTGSNILKTMLPYLKTVLR
CCCCCCCEEECCCHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA