| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692914
Identifier: 213692914
GI number: 213692914
Start: 2269263
End: 2269940
Strand: Reverse
Name: 213692914
Synonym: Blon_2058
Alternate gene names: NA
Gene position: 2269940-2269263 (Counterclockwise)
Preceding gene: 213692915
Following gene: 213692913
Centisome position: 80.13
GC content: 53.24
Gene sequence:
>678_bases ATGCTTGCCCGCTTCTCTGTGGCCTACGAGCGGTTCTGCCGTCTGCTAGTCACGATTTTCGTGGTCAACGTGGCCATACT CGCGCACACTCTGATGGGAGCCGTCGTGCTGGGATTTCTCCCCTCACTCGCAGCTACGTACTCCACGTTCCGCATGTGGT TACTTTCCGAGGACCGTTCCATATGTGCTAAGGAAGTATGGAAAACATTCCATGGCTTTTGGAAAAGCGAATTCAAACGT GCGAATCTTTTCGGTTGGCCGTTGATCGTTCTCTGGGCTGTAATCATCATCGATTGCTGTATGATGAGCAGACATGCCCG CAACAGTTTTGATATTGCGATTTCCGGTGTGCTTCTGCTGCTCATTGCGGTTCTCGTGATGTTCACCTGCTTGGTTTGGG TAGTGCGCGCGAATTACGCGGAACGTTCCGTCTGGATTGTCCGCACGACGTTGGCGATGATTGTGGCACGCCCGTTGTGC AGCCTTCTGCAGGTTGGACTGCTGATTCTTACCGTGCTTGTATGGGTGCAATGGCCTGGAATTCTCATGGTGTTCGGCTT GTCGCTGCCGATGTTCTGCACAGCCTGGATTATTTATTCATTCGGCCGTCTGCCTGGAATGGACATTCATGACCGCATGG AACAGAGCGCGGGCCACGCCCGAAACCAGACATCGTGA
Upstream 100 bases:
>100_bases TTCAACAAGGGCGTGATGCTCGGTGCGGTCAAGGGTTGAGTCAAACGCAATCCGACAAGAGACAACCAATCTAAAAGCCA GCCGATAGAAAGGATTCGCT
Downstream 100 bases:
>100_bases CATGTTCGCAAAAAGGGGGGTGATAAAATGGTGCAGTCGTCAGTAAGTCAACGAGTGAACAGGTCCAAACGATTGGTATC CATCAAAGACATAGCTAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MLARFSVAYERFCRLLVTIFVVNVAILAHTLMGAVVLGFLPSLAATYSTFRMWLLSEDRSICAKEVWKTFHGFWKSEFKR ANLFGWPLIVLWAVIIIDCCMMSRHARNSFDIAISGVLLLLIAVLVMFTCLVWVVRANYAERSVWIVRTTLAMIVARPLC SLLQVGLLILTVLVWVQWPGILMVFGLSLPMFCTAWIIYSFGRLPGMDIHDRMEQSAGHARNQTS
Sequences:
>Translated_225_residues MLARFSVAYERFCRLLVTIFVVNVAILAHTLMGAVVLGFLPSLAATYSTFRMWLLSEDRSICAKEVWKTFHGFWKSEFKR ANLFGWPLIVLWAVIIIDCCMMSRHARNSFDIAISGVLLLLIAVLVMFTCLVWVVRANYAERSVWIVRTTLAMIVARPLC SLLQVGLLILTVLVWVQWPGILMVFGLSLPMFCTAWIIYSFGRLPGMDIHDRMEQSAGHARNQTS >Mature_225_residues MLARFSVAYERFCRLLVTIFVVNVAILAHTLMGAVVLGFLPSLAATYSTFRMWLLSEDRSICAKEVWKTFHGFWKSEFKR ANLFGWPLIVLWAVIIIDCCMMSRHARNSFDIAISGVLLLLIAVLVMFTCLVWVVRANYAERSVWIVRTTLAMIVARPLC SLLQVGLLILTVLVWVQWPGILMVFGLSLPMFCTAWIIYSFGRLPGMDIHDRMEQSAGHARNQTS
Specific function: Unknown
COG id: COG5578
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25594; Mature: 25594
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARFSVAYERFCRLLVTIFVVNVAILAHTLMGAVVLGFLPSLAATYSTFRMWLLSEDRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH ICAKEVWKTFHGFWKSEFKRANLFGWPLIVLWAVIIIDCCMMSRHARNSFDIAISGVLLL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LIAVLVMFTCLVWVVRANYAERSVWIVRTTLAMIVARPLCSLLQVGLLILTVLVWVQWPG HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH ILMVFGLSLPMFCTAWIIYSFGRLPGMDIHDRMEQSAGHARNQTS HHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLARFSVAYERFCRLLVTIFVVNVAILAHTLMGAVVLGFLPSLAATYSTFRMWLLSEDRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH ICAKEVWKTFHGFWKSEFKRANLFGWPLIVLWAVIIIDCCMMSRHARNSFDIAISGVLLL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LIAVLVMFTCLVWVVRANYAERSVWIVRTTLAMIVARPLCSLLQVGLLILTVLVWVQWPG HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH ILMVFGLSLPMFCTAWIIYSFGRLPGMDIHDRMEQSAGHARNQTS HHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA