Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is zur [H]

Identifier: 213692834

GI number: 213692834

Start: 2153866

End: 2154366

Strand: Direct

Name: zur [H]

Synonym: Blon_1974

Alternate gene names: 213692834

Gene position: 2153866-2154366 (Clockwise)

Preceding gene: 213692833

Following gene: 213692835

Centisome position: 76.03

GC content: 61.68

Gene sequence:

>501_bases
ATGAGCACCGAGCAAACCGCGACCACTCGGCGCGTGACGCGACCCCGACTCCTCATCACCCAGGTCCTGGCGGAACTATC
CCGATTCGCCACGGCCCAGGAAATCACCGACATCCTGCGCGAGCGCGGCACGCGCATCGGCACGGCCACCGCCTACCGCA
ATGTGCAGATGATGGCCTCCCAAGGCGAGCTCGACGTAATCCACGTCAACGGCGAGGCCCTCTACCGCGAGTGCTCGGAC
CAGCATCACCACCATCACATCGTATGCCACGAATGCGGGCGGACCATCGAAATCGAGATTCCCGGACTTGAGCAGTGGAT
CGACAAAGCCGCCAAGCAGTTGAAGTACCAGACCATCGCCCACGAACTGGAGATTTTCGACCTGTGCCCCAAGTGTGCGG
CGAAGCATGCCATCGAACCGCCTCTCAGCGTCGGCACCTCACCAAAGGATGGACCACTGACGACGCCAGACGATACTGGC
CGTCGGCGCTCGAACAAATAA

Upstream 100 bases:

>100_bases
TCTGCCAGTTGATTCAAATCATGTGACAACATGCCGGGCATCTGATTTGCTTTAATAACGATAATGAATATCATTTGTTA
ACAGAAAGGGGCAGAACGTC

Downstream 100 bases:

>100_bases
TGGCGCAGTCCCGACGCTACTGGCCTTCAGCATCGGTGCCCTTCCAATCCTTGGCGCAATAGCGACGATATAAGCTCCAC
TCGCATCGTTAGATTGCCAA

Product: ferric uptake regulator, Fur family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSTEQTATTRRVTRPRLLITQVLAELSRFATAQEITDILRERGTRIGTATAYRNVQMMASQGELDVIHVNGEALYRECSD
QHHHHHIVCHECGRTIEIEIPGLEQWIDKAAKQLKYQTIAHELEIFDLCPKCAAKHAIEPPLSVGTSPKDGPLTTPDDTG
RRRSNK

Sequences:

>Translated_166_residues
MSTEQTATTRRVTRPRLLITQVLAELSRFATAQEITDILRERGTRIGTATAYRNVQMMASQGELDVIHVNGEALYRECSD
QHHHHHIVCHECGRTIEIEIPGLEQWIDKAAKQLKYQTIAHELEIFDLCPKCAAKHAIEPPLSVGTSPKDGPLTTPDDTG
RRRSNK
>Mature_165_residues
STEQTATTRRVTRPRLLITQVLAELSRFATAQEITDILRERGTRIGTATAYRNVQMMASQGELDVIHVNGEALYRECSDQ
HHHHHIVCHECGRTIEIEIPGLEQWIDKAAKQLKYQTIAHELEIFDLCPKCAAKHAIEPPLSVGTSPKDGPLTTPDDTGR
RRSNK

Specific function: Required for the zinc-specific repression of two operons implicated in zinc uptake, yciC and ycdHIyceA. Also represses the expression of rpmE2, the gene for ribosomal protein L31B, which is expressed only after the end of exponential growth [H]

COG id: COG0735

COG function: function code P; Fe2+/Zn2+ uptake regulation proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Fur family [H]

Homologues:

None

Paralogues:

None

Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002481 [H]

Pfam domain/function: PF01475 FUR [H]

EC number: NA

Molecular weight: Translated: 18689; Mature: 18558

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEQTATTRRVTRPRLLITQVLAELSRFATAQEITDILRERGTRIGTATAYRNVQMMAS
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
QGELDVIHVNGEALYRECSDQHHHHHIVCHECGRTIEIEIPGLEQWIDKAAKQLKYQTIA
CCCEEEEEECHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHH
HELEIFDLCPKCAAKHAIEPPLSVGTSPKDGPLTTPDDTGRRRSNK
HHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
STEQTATTRRVTRPRLLITQVLAELSRFATAQEITDILRERGTRIGTATAYRNVQMMAS
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
QGELDVIHVNGEALYRECSDQHHHHHIVCHECGRTIEIEIPGLEQWIDKAAKQLKYQTIA
CCCEEEEEECHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHH
HELEIFDLCPKCAAKHAIEPPLSVGTSPKDGPLTTPDDTGRRRSNK
HHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 9811636 [H]