| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is mtaD [H]
Identifier: 213692813
GI number: 213692813
Start: 2133722
End: 2135095
Strand: Direct
Name: mtaD [H]
Synonym: Blon_1953
Alternate gene names: 213692813
Gene position: 2133722-2135095 (Clockwise)
Preceding gene: 213692812
Following gene: 213692814
Centisome position: 75.32
GC content: 60.77
Gene sequence:
>1374_bases ATGACCGACAACACCTGGCCGACCGTCGATACCGAGCTTATCGATGATGTGACACTGTATTCTGCCAAACTCATCATCCC CGTGACGGGCCCCGTCATCATCGATGGCGCAGTTGCCATACATGGCGACCGCGTGGTTCATGTAGGTAAACGCCGCTGGG TGCTGGAGGCGCTGAAGCAGGAAATGACGTCTCACGGCACCATCCGTGAACGGCATTGGGATGGGGTGCTCACCCCCGGA TTGGTCAACGCGCACACTCATCTGCAGTACAGCGGCATGGTGCAGGTCGGGCAAGGCACCTACGATCGGTTCCGCGCCTG GGAACTGGCATTCAACGAGGTGTACGCCGAGGCGCAGAAGACCCAGCCATGGAAGCAGTGGGCCGAGGACGGTGCTCGCC AGATGGTCGAATCGGGAACGACGGCCGCCGCAGACATCGTCACCGATTTGGACGCCGCCGGCGCGCTGGCTTCGCAGGGC ATGCACGGCATCGCTTATTGGGAGGTAATGGGCTGGCACAACGACGAATGGATGGAAAAGGGCCGCACCGAGCTCATCCG GCAGTTGCGCCGGATGAACGAGGAGCAGCTGCCGAACCTCGGCATCAGCCCGCATGCTCCGTATACGCTGGAGTCCGAAC CGTTCGTTGATCTTCCAGACATTGCTCGTCAGCTGAACATGCGACTGCATATCCATCTGGCGGAGACCCCGCTCGAGGCC GGCACTTATCCGCCGGTGCTCACCACTTATTCGGCGTCCGACTGGCGTGACCACGATTGGGAAAGCTACCGGCAGCTCAA AGACGTGGGCAAAGGTGCCTCCGCCATCCAGTTCGTCGATCAGCTTGGCTCGCTTGGCCCGGATGTGCACATTGCACACG GCGTGTGGGCCAATGGCGAGGATCGGCGTATTCTACGTCAGCGCGGCGTGGGCGTGGCCTTGTGCCCCCGATCGAATCGC ATTACCAACACCGGCAAAGATGCACCGGTGCGCGAATACCTCGAGGAAGGTAATCTGGTAAGCGTGGGCACCGATTCGCT CTCCAGCACGCCGACCCTCGATCTGCTTGATGACGTGTCGATGCTTTACGACCTGGCCCGCGAACAAGGCTATGCCAGCG ACGATCTGACACATCGCCTGATTCGTATGATGACGCTGGGCGGTGCCGCCTCCATGGGTATGCACGTGGGCCGAAACCGC ATTGGACAGATCAACGCGGGCGCATTGGCTGATTTCGCGTTCTTCGACATCCCCGTCGACACATCATCTCCGGCCGGCAT CGAAGAAACGCTGGAAACACTGGTGAAGCACGGTGCAGGCACGAACCGAGCCACGGTGATATCCGGGCGCGAAGCCTACA ACAACGTCTGGTGA
Upstream 100 bases:
>100_bases CGGCTACGATTGGCGACTGACCAGATTCGCGGAAAACGACCGAGAGAACGCCGACCGATAGCCATAGACACGGCACCGAA CACAACGCAGCGAGGAGAAT
Downstream 100 bases:
>100_bases CACCGCTGACCCGACCTGATATCAAGAAGCCAAAAACCAGCAAACCCGCCAAGAACAGGAGATCTCATTATGAGCGTCGC TTTGCGAGACATGAGTCCAT
Product: amidohydrolase
Products: NA
Alternate protein names: MTA/SAH deaminase [H]
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MTDNTWPTVDTELIDDVTLYSAKLIIPVTGPVIIDGAVAIHGDRVVHVGKRRWVLEALKQEMTSHGTIRERHWDGVLTPG LVNAHTHLQYSGMVQVGQGTYDRFRAWELAFNEVYAEAQKTQPWKQWAEDGARQMVESGTTAAADIVTDLDAAGALASQG MHGIAYWEVMGWHNDEWMEKGRTELIRQLRRMNEEQLPNLGISPHAPYTLESEPFVDLPDIARQLNMRLHIHLAETPLEA GTYPPVLTTYSASDWRDHDWESYRQLKDVGKGASAIQFVDQLGSLGPDVHIAHGVWANGEDRRILRQRGVGVALCPRSNR ITNTGKDAPVREYLEEGNLVSVGTDSLSSTPTLDLLDDVSMLYDLAREQGYASDDLTHRLIRMMTLGGAASMGMHVGRNR IGQINAGALADFAFFDIPVDTSSPAGIEETLETLVKHGAGTNRATVISGREAYNNVW
Sequences:
>Translated_457_residues MTDNTWPTVDTELIDDVTLYSAKLIIPVTGPVIIDGAVAIHGDRVVHVGKRRWVLEALKQEMTSHGTIRERHWDGVLTPG LVNAHTHLQYSGMVQVGQGTYDRFRAWELAFNEVYAEAQKTQPWKQWAEDGARQMVESGTTAAADIVTDLDAAGALASQG MHGIAYWEVMGWHNDEWMEKGRTELIRQLRRMNEEQLPNLGISPHAPYTLESEPFVDLPDIARQLNMRLHIHLAETPLEA GTYPPVLTTYSASDWRDHDWESYRQLKDVGKGASAIQFVDQLGSLGPDVHIAHGVWANGEDRRILRQRGVGVALCPRSNR ITNTGKDAPVREYLEEGNLVSVGTDSLSSTPTLDLLDDVSMLYDLAREQGYASDDLTHRLIRMMTLGGAASMGMHVGRNR IGQINAGALADFAFFDIPVDTSSPAGIEETLETLVKHGAGTNRATVISGREAYNNVW >Mature_456_residues TDNTWPTVDTELIDDVTLYSAKLIIPVTGPVIIDGAVAIHGDRVVHVGKRRWVLEALKQEMTSHGTIRERHWDGVLTPGL VNAHTHLQYSGMVQVGQGTYDRFRAWELAFNEVYAEAQKTQPWKQWAEDGARQMVESGTTAAADIVTDLDAAGALASQGM HGIAYWEVMGWHNDEWMEKGRTELIRQLRRMNEEQLPNLGISPHAPYTLESEPFVDLPDIARQLNMRLHIHLAETPLEAG TYPPVLTTYSASDWRDHDWESYRQLKDVGKGASAIQFVDQLGSLGPDVHIAHGVWANGEDRRILRQRGVGVALCPRSNRI TNTGKDAPVREYLEEGNLVSVGTDSLSSTPTLDLLDDVSMLYDLAREQGYASDDLTHRLIRMMTLGGAASMGMHVGRNRI GQINAGALADFAFFDIPVDTSSPAGIEETLETLVKHGAGTNRATVISGREAYNNVW
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.28 [H]
Molecular weight: Translated: 50625; Mature: 50494
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNTWPTVDTELIDDVTLYSAKLIIPVTGPVIIDGAVAIHGDRVVHVGKRRWVLEALKQ CCCCCCCCCCHHHHHHHHEEEEEEEEEECCCEEECCEEEEECCEEEEECHHHHHHHHHHH EMTSHGTIRERHWDGVLTPGLVNAHTHLQYSGMVQVGQGTYDRFRAWELAFNEVYAEAQK HHHHCCCCCHHCCCCCCCCCEECCCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHC TQPWKQWAEDGARQMVESGTTAAADIVTDLDAAGALASQGMHGIAYWEVMGWHNDEWMEK CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH GRTELIRQLRRMNEEQLPNLGISPHAPYTLESEPFVDLPDIARQLNMRLHIHLAETPLEA HHHHHHHHHHHCCHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHCCCEEEEEEECCCCCC GTYPPVLTTYSASDWRDHDWESYRQLKDVGKGASAIQFVDQLGSLGPDVHIAHGVWANGE CCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCCCCC DRRILRQRGVGVALCPRSNRITNTGKDAPVREYLEEGNLVSVGTDSLSSTPTLDLLDDVS HHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHH MLYDLAREQGYASDDLTHRLIRMMTLGGAASMGMHVGRNRIGQINAGALADFAFFDIPVD HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHEEEEEECCC TSSPAGIEETLETLVKHGAGTNRATVISGREAYNNVW CCCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHCCCC >Mature Secondary Structure TDNTWPTVDTELIDDVTLYSAKLIIPVTGPVIIDGAVAIHGDRVVHVGKRRWVLEALKQ CCCCCCCCCHHHHHHHHEEEEEEEEEECCCEEECCEEEEECCEEEEECHHHHHHHHHHH EMTSHGTIRERHWDGVLTPGLVNAHTHLQYSGMVQVGQGTYDRFRAWELAFNEVYAEAQK HHHHCCCCCHHCCCCCCCCCEECCCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHC TQPWKQWAEDGARQMVESGTTAAADIVTDLDAAGALASQGMHGIAYWEVMGWHNDEWMEK CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH GRTELIRQLRRMNEEQLPNLGISPHAPYTLESEPFVDLPDIARQLNMRLHIHLAETPLEA HHHHHHHHHHHCCHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHCCCEEEEEEECCCCCC GTYPPVLTTYSASDWRDHDWESYRQLKDVGKGASAIQFVDQLGSLGPDVHIAHGVWANGE CCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCCCCC DRRILRQRGVGVALCPRSNRITNTGKDAPVREYLEEGNLVSVGTDSLSSTPTLDLLDDVS HHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHH MLYDLAREQGYASDDLTHRLIRMMTLGGAASMGMHVGRNRIGQINAGALADFAFFDIPVD HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHEEEEEECCC TSSPAGIEETLETLVKHGAGTNRATVISGREAYNNVW CCCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA