| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yeiH [C]
Identifier: 213692783
GI number: 213692783
Start: 2095964
End: 2097028
Strand: Reverse
Name: yeiH [C]
Synonym: Blon_1920
Alternate gene names: 213692783
Gene position: 2097028-2095964 (Counterclockwise)
Preceding gene: 213692784
Following gene: 213692779
Centisome position: 74.03
GC content: 60.09
Gene sequence:
>1065_bases ATGAGAGAGTTCTGTACAAAATGGTGGAAGCGCATTGCCGCCGTTGACATGTTGTTCATTGGCGTTCTGACTCTGCTGGC TTCGCTGTTCGCCTCCTGGCTCAAGCAGTTCCCCGGATTCAGCCTGTTCGGCGCGCTTATCATCGCGCTGCTCATCGGTA TGATCATCCAGTTCCCGATCCGCAGTGCCTACGTCGGTTCCAATGATGGCCGCAAGGCAGGCGTCAAGGACGCCGCTGGC TTGATTTCCAACAAGTTGCTGCGCCTCGGCATCATCCTGCTCGGTTTCAAGCTCAACCTCGCCGTGCTGTTCACGCAGGG CATCAAGTGTCTGCCGATCGCCGCTGTGGTCGTCACGCTGACCATCATCGTGTGCTATGCCATCGCCCGCAAGCTCGGTG TCGACCCGATGCTCGCCATCCTGACCGCCGGTGGCACCGGCATCTGCGGTGCGGCCGCCGTCATGGGTCTGGCCGGTTCC ATCAAGGTGTCTGAGGACAAGCAGGACGAGAAGGACAACGACGTGACCATGGCCGTGGCCATCGTAGCCATTATGGGTAC TGTGTTCGCGTTGCTGGAGATCGCGCTCGGCCCGCTGACCGGCATGACCAAGGACCAGCTGGGCATCACCGCCGGTGCTT CCCTGCACGAAATCGCCCATGCGGTCGCCGCCGGCGACGCTTTCGGCGCGGTGGACATCGCCACCATCATGAAGCTCTCC CGCGTGCTCATGCTCGTGTTCGCCGCCATCATTATCGCTATCTGGTGGGAGAAGAAGCACTCTGAGGTGGAGAACACCGG CAAGAAGACCGTGGCCTTCCCGTGGTTCATGCTCGGCTTTATCGGCGCTTCGATCATCGGCACTTTCGTGCCGTTCATCG CCTTCATCACCCCGCAGCTTGTGGACTTCGCGTACATAGTACTCGGTATGGCCATGGCCGCGCTTGGCATCAATGTGAAC TTCAAGGCCATCGCTTCCAAAGGCAAGAAGCCCATGCTCGCCAGCTTCCTGACCTCGATCCTGCTCATGTGCTTCGCGGC AGGCGTCGCGGTGCTGTTCTTCTGA
Upstream 100 bases:
>100_bases CCCGTCAGAGGGGAGCCAAAATGTGGTATCGGCAAAATCGATGATATGTATTGGTAGCAATGATTTGACCGATGTAAACG CTTGAGATTCAATAGACACC
Downstream 100 bases:
>100_bases TCTGATAAGTGCTCTGAAATACGAATAAGCGGCATATGAATGAGTCATATGCCTCCTATTCGTTGTCGTGATATGTCGGT GCAATCAGTCGGCGCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MREFCTKWWKRIAAVDMLFIGVLTLLASLFASWLKQFPGFSLFGALIIALLIGMIIQFPIRSAYVGSNDGRKAGVKDAAG LISNKLLRLGIILLGFKLNLAVLFTQGIKCLPIAAVVVTLTIIVCYAIARKLGVDPMLAILTAGGTGICGAAAVMGLAGS IKVSEDKQDEKDNDVTMAVAIVAIMGTVFALLEIALGPLTGMTKDQLGITAGASLHEIAHAVAAGDAFGAVDIATIMKLS RVLMLVFAAIIIAIWWEKKHSEVENTGKKTVAFPWFMLGFIGASIIGTFVPFIAFITPQLVDFAYIVLGMAMAALGINVN FKAIASKGKKPMLASFLTSILLMCFAAGVAVLFF
Sequences:
>Translated_354_residues MREFCTKWWKRIAAVDMLFIGVLTLLASLFASWLKQFPGFSLFGALIIALLIGMIIQFPIRSAYVGSNDGRKAGVKDAAG LISNKLLRLGIILLGFKLNLAVLFTQGIKCLPIAAVVVTLTIIVCYAIARKLGVDPMLAILTAGGTGICGAAAVMGLAGS IKVSEDKQDEKDNDVTMAVAIVAIMGTVFALLEIALGPLTGMTKDQLGITAGASLHEIAHAVAAGDAFGAVDIATIMKLS RVLMLVFAAIIIAIWWEKKHSEVENTGKKTVAFPWFMLGFIGASIIGTFVPFIAFITPQLVDFAYIVLGMAMAALGINVN FKAIASKGKKPMLASFLTSILLMCFAAGVAVLFF >Mature_354_residues MREFCTKWWKRIAAVDMLFIGVLTLLASLFASWLKQFPGFSLFGALIIALLIGMIIQFPIRSAYVGSNDGRKAGVKDAAG LISNKLLRLGIILLGFKLNLAVLFTQGIKCLPIAAVVVTLTIIVCYAIARKLGVDPMLAILTAGGTGICGAAAVMGLAGS IKVSEDKQDEKDNDVTMAVAIVAIMGTVFALLEIALGPLTGMTKDQLGITAGASLHEIAHAVAAGDAFGAVDIATIMKLS RVLMLVFAAIIIAIWWEKKHSEVENTGKKTVAFPWFMLGFIGASIIGTFVPFIAFITPQLVDFAYIVLGMAMAALGINVN FKAIASKGKKPMLASFLTSILLMCFAAGVAVLFF
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=297, Percent_Identity=35.016835016835, Blast_Score=112, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 37510; Mature: 37510
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREFCTKWWKRIAAVDMLFIGVLTLLASLFASWLKQFPGFSLFGALIIALLIGMIIQFPI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH RSAYVGSNDGRKAGVKDAAGLISNKLLRLGIILLGFKLNLAVLFTQGIKCLPIAAVVVTL HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH TIIVCYAIARKLGVDPMLAILTAGGTGICGAAAVMGLAGSIKVSEDKQDEKDNDVTMAVA HHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHH IVAIMGTVFALLEIALGPLTGMTKDQLGITAGASLHEIAHAVAAGDAFGAVDIATIMKLS HHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH RVLMLVFAAIIIAIWWEKKHSEVENTGKKTVAFPWFMLGFIGASIIGTFVPFIAFITPQL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDFAYIVLGMAMAALGINVNFKAIASKGKKPMLASFLTSILLMCFAAGVAVLFF HHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MREFCTKWWKRIAAVDMLFIGVLTLLASLFASWLKQFPGFSLFGALIIALLIGMIIQFPI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH RSAYVGSNDGRKAGVKDAAGLISNKLLRLGIILLGFKLNLAVLFTQGIKCLPIAAVVVTL HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH TIIVCYAIARKLGVDPMLAILTAGGTGICGAAAVMGLAGSIKVSEDKQDEKDNDVTMAVA HHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHH IVAIMGTVFALLEIALGPLTGMTKDQLGITAGASLHEIAHAVAAGDAFGAVDIATIMKLS HHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH RVLMLVFAAIIIAIWWEKKHSEVENTGKKTVAFPWFMLGFIGASIIGTFVPFIAFITPQL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDFAYIVLGMAMAALGINVNFKAIASKGKKPMLASFLTSILLMCFAAGVAVLFF HHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12381787 [H]