| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is adhB [H]
Identifier: 213692779
GI number: 213692779
Start: 2092797
End: 2093840
Strand: Reverse
Name: adhB [H]
Synonym: Blon_1915
Alternate gene names: 213692779
Gene position: 2093840-2092797 (Counterclockwise)
Preceding gene: 213692783
Following gene: 213692777
Centisome position: 73.92
GC content: 62.36
Gene sequence:
>1044_bases ATGACCGAAATGATGAAAGCCGCGATTTTCGTGGAGCCTGGCAAGATGGCCGTGGAAGAAGTGCCGAAGGCGACGCGTGA ACAGGATGATGACATCGTGATCCGCGTGGTGCGCACGTGCGTGTGTGGCTCTGATTTGTGGTTCTTCCGTGGGCTGAGCG GACAGGCCGCGCACAGCCAGGTGGGTCACGAGTCCATCGGTGTGGTCGAAGAGGTTGGCGCGGCGGTCGAATCCGTTAAG CCAGGTGATTTCGTGGTCGTGCCATTCCCGTACAGCTGCGGCAAGTGCCCGGTATGCAAGGCCGGCTTCGAATCCGTGTG CCCGCACGGCGGCTACTTCTCCGCTTGTCAGGCTGAATACCTGCGTGTGCCCGAGGCGGACGGCACCGTGGTCAAGGTGC CCGGTTCACCGGAAGATTATTCCGATGAGCAGCTCGCATCGCTGCTGACCATTTCCGATGTGATGTCCACCGGTTATCAC GCGGCGGCTTCTGCCGAGGTCAAGCCCGGTGACACCGCCGTGGTCATGGGCGATGGTGCAGTCGGCCTGTGCGGTGTGAT TGCCGCTAAGATGCTCGGTGCGAAACGCATCATCGCCATGAGCCGTCACGAGGATCGCGCGGCGCTCGCCCGCGAATTTG GTGCGACTGATATCGTGCCCGAGCGCGGCCAAGAAGCTATTGACAAGGTGCTAGGAATGACCGGCGGTTACGGTGCCGAC GCAGTTCTCGAATGCGTGGGCTCCAAGCAGTCCTTCGACACGGCGATTGGCCTGATTCGCCGCGGTGGCGTGATCGGCCG TGTGGGCCTGCCGCATGACGTGGAGATCAGCGCCGAAGGCACGTTCTACGGCAACATCGGCATCAAGGGCGGCCCGGCCC CCGTGCGCCACTACGACCTTGACTGCGGACTGCTCGACGCGGTGCTCAAGGGCGAAATCAACCCCGGCCGCGTGTTCACC GACGAATACGACCTCGACCATATCCAAGACGCCTACGAGGCGATGGACCAGCGCAAGGTCATCAAGGCGCTGATCCGGTT CTAG
Upstream 100 bases:
>100_bases GAAGAAAACCGGAACATCATCGAACAGGTGAAGCGCCTGCAAACCGACGTCAAACAATAAACGACAATAGACAGATATTC CCAACAAAGGAGTGATGGAC
Downstream 100 bases:
>100_bases GGTTAGGTACGCAGCGAACGGTTCTCACCAAGAACCGTGTGAGCCATTCGCACAAAATCGCACAATCAAACAGGCCGACG GTGTGATGGGGGGTGTTCCT
Product: Alcohol dehydrogenase GroES domain protein
Products: aldehyde; ketone; NADH; H+
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTEMMKAAIFVEPGKMAVEEVPKATREQDDDIVIRVVRTCVCGSDLWFFRGLSGQAAHSQVGHESIGVVEEVGAAVESVK PGDFVVVPFPYSCGKCPVCKAGFESVCPHGGYFSACQAEYLRVPEADGTVVKVPGSPEDYSDEQLASLLTISDVMSTGYH AAASAEVKPGDTAVVMGDGAVGLCGVIAAKMLGAKRIIAMSRHEDRAALAREFGATDIVPERGQEAIDKVLGMTGGYGAD AVLECVGSKQSFDTAIGLIRRGGVIGRVGLPHDVEISAEGTFYGNIGIKGGPAPVRHYDLDCGLLDAVLKGEINPGRVFT DEYDLDHIQDAYEAMDQRKVIKALIRF
Sequences:
>Translated_347_residues MTEMMKAAIFVEPGKMAVEEVPKATREQDDDIVIRVVRTCVCGSDLWFFRGLSGQAAHSQVGHESIGVVEEVGAAVESVK PGDFVVVPFPYSCGKCPVCKAGFESVCPHGGYFSACQAEYLRVPEADGTVVKVPGSPEDYSDEQLASLLTISDVMSTGYH AAASAEVKPGDTAVVMGDGAVGLCGVIAAKMLGAKRIIAMSRHEDRAALAREFGATDIVPERGQEAIDKVLGMTGGYGAD AVLECVGSKQSFDTAIGLIRRGGVIGRVGLPHDVEISAEGTFYGNIGIKGGPAPVRHYDLDCGLLDAVLKGEINPGRVFT DEYDLDHIQDAYEAMDQRKVIKALIRF >Mature_346_residues TEMMKAAIFVEPGKMAVEEVPKATREQDDDIVIRVVRTCVCGSDLWFFRGLSGQAAHSQVGHESIGVVEEVGAAVESVKP GDFVVVPFPYSCGKCPVCKAGFESVCPHGGYFSACQAEYLRVPEADGTVVKVPGSPEDYSDEQLASLLTISDVMSTGYHA AASAEVKPGDTAVVMGDGAVGLCGVIAAKMLGAKRIIAMSRHEDRAALAREFGATDIVPERGQEAIDKVLGMTGGYGADA VLECVGSKQSFDTAIGLIRRGGVIGRVGLPHDVEISAEGTFYGNIGIKGGPAPVRHYDLDCGLLDAVLKGEINPGRVFTD EYDLDHIQDAYEAMDQRKVIKALIRF
Specific function: Unknown
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily [H]
Homologues:
Organism=Homo sapiens, GI71565152, Length=393, Percent_Identity=27.2264631043257, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI156523966, Length=371, Percent_Identity=28.8409703504043, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI71565154, Length=391, Percent_Identity=27.8772378516624, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI4501939, Length=365, Percent_Identity=29.041095890411, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI71743840, Length=384, Percent_Identity=25.2604166666667, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI262073058, Length=384, Percent_Identity=25.2604166666667, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI156627571, Length=273, Percent_Identity=26.7399267399267, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI1786825, Length=389, Percent_Identity=28.5347043701799, Blast_Score=138, Evalue=7e-34, Organism=Escherichia coli, GI1788073, Length=359, Percent_Identity=28.9693593314763, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1786552, Length=375, Percent_Identity=29.6, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1790045, Length=330, Percent_Identity=26.969696969697, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1788075, Length=346, Percent_Identity=26.0115606936416, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1787863, Length=357, Percent_Identity=25.4901960784314, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI226510992, Length=332, Percent_Identity=27.4096385542169, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI87082125, Length=335, Percent_Identity=26.2686567164179, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI87081918, Length=235, Percent_Identity=33.6170212765957, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788407, Length=315, Percent_Identity=24.1269841269841, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1790718, Length=344, Percent_Identity=23.546511627907, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17562876, Length=359, Percent_Identity=25.9052924791086, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17562878, Length=272, Percent_Identity=24.6323529411765, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25146526, Length=364, Percent_Identity=26.0989010989011, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71997431, Length=373, Percent_Identity=26.2734584450402, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17565904, Length=358, Percent_Identity=25.9776536312849, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17562582, Length=287, Percent_Identity=26.4808362369338, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6319955, Length=293, Percent_Identity=31.740614334471, Blast_Score=107, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6322619, Length=293, Percent_Identity=31.740614334471, Blast_Score=107, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6319258, Length=345, Percent_Identity=26.3768115942029, Blast_Score=103, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6320033, Length=373, Percent_Identity=27.3458445040214, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6323099, Length=311, Percent_Identity=27.9742765273312, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6319257, Length=274, Percent_Identity=28.4671532846715, Blast_Score=77, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6324486, Length=282, Percent_Identity=27.6595744680851, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323961, Length=290, Percent_Identity=26.551724137931, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI17737895, Length=371, Percent_Identity=26.6846361185984, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI17137530, Length=317, Percent_Identity=27.1293375394322, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI17737897, Length=322, Percent_Identity=27.0186335403727, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI221457811, Length=193, Percent_Identity=29.5336787564767, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI45550770, Length=193, Percent_Identity=29.5336787564767, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI45551930, Length=193, Percent_Identity=29.5336787564767, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: 1.1.1.1
Molecular weight: Translated: 36818; Mature: 36687
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEMMKAAIFVEPGKMAVEEVPKATREQDDDIVIRVVRTCVCGSDLWFFRGLSGQAAHSQ CCCHHEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCHHHHH VGHESIGVVEEVGAAVESVKPGDFVVVPFPYSCGKCPVCKAGFESVCPHGGYFSACQAEY CCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHH LRVPEADGTVVKVPGSPEDYSDEQLASLLTISDVMSTGYHAAASAEVKPGDTAVVMGDGA HCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC VGLCGVIAAKMLGAKRIIAMSRHEDRAALAREFGATDIVPERGQEAIDKVLGMTGGYGAD HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHH AVLECVGSKQSFDTAIGLIRRGGVIGRVGLPHDVEISAEGTFYGNIGIKGGPAPVRHYDL HHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCEEEEECCEEEECCCCCCCCCCCEEECC DCGLLDAVLKGEINPGRVFTDEYDLDHIQDAYEAMDQRKVIKALIRF CHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TEMMKAAIFVEPGKMAVEEVPKATREQDDDIVIRVVRTCVCGSDLWFFRGLSGQAAHSQ CCHHEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCHHHHH VGHESIGVVEEVGAAVESVKPGDFVVVPFPYSCGKCPVCKAGFESVCPHGGYFSACQAEY CCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHH LRVPEADGTVVKVPGSPEDYSDEQLASLLTISDVMSTGYHAAASAEVKPGDTAVVMGDGA HCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC VGLCGVIAAKMLGAKRIIAMSRHEDRAALAREFGATDIVPERGQEAIDKVLGMTGGYGAD HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHH AVLECVGSKQSFDTAIGLIRRGGVIGRVGLPHDVEISAEGTFYGNIGIKGGPAPVRHYDL HHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCEEEEECCEEEECCCCCCCCCCCEEECC DCGLLDAVLKGEINPGRVFTDEYDLDHIQDAYEAMDQRKVIKALIRF CHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: alcohol; NAD+
Specific reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9141695; 9384377 [H]