| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692758
Identifier: 213692758
GI number: 213692758
Start: 2064126
End: 2064908
Strand: Direct
Name: 213692758
Synonym: Blon_1892
Alternate gene names: NA
Gene position: 2064126-2064908 (Clockwise)
Preceding gene: 213692757
Following gene: 213692759
Centisome position: 72.87
GC content: 60.28
Gene sequence:
>783_bases ATGGCGGAGAAGGACGCGAAGCCGAAGAAGCAGAGCACAATCAAGCAGATCATCCAGATCTACAAGTACACGGCTAAGGA AGACAAGGCCCTGCCGTGGCTTGAGGCCGGTGCTTTCCTGCTGCCTGTAGTCGTGACGATCATCATCGGTCTGATTGTCA AGTGGACCTGGCTGATCTGGATCTTCACCATGATCACCGCCATCATGCTCGGCATTCTGCTGGCCACCATGATGCTCACC CGCCGCGCGGATGCAGTCGGCTACAAGCAGATTGATGGCAAGCCTGGTGCCGCCATCGGCGTGCTGAGCAACATGCAGAA AGCCGGCTTTGACTTCCCGCAGGAACCGGCGTGGATCGACCCGAAGACCAAGGATGCCATCTGGCGCGGCACTTCGATGA ACGGCATCTACCTGATCGGCGAAGGCGAATACGGTCGCGTCATGAAGGCGATGGATCGTCAGGAACGCGATATCAAGGGC GTCACCGCCGGCTCCTCCATTCCGGTGTACCGCATCGCCGTGGGCCACGGCCCCAAGCAGGTGCCGCTGGCCAAGCTGCG TAGCACGGTGATCAAGTCCAAGAGCTATGAGCCCACGCACCACAAGAACGCACTGATCGCCAAGATTCATCCGCGCCGTC GCTTCCTGCTGACCAAGGCCGAGATGGAAACGCTGAACGATCGTCTTCGCACGCTGCAGGCCAAGAAGGGCTATGCCATC CCCAAGGGCATGGATCCGAACCGCCCGCAGAAGATCTCCCGCCGCGCGATGCGCGGTCGCTGA
Upstream 100 bases:
>100_bases CATTGCACACACGCTGAGACCAACCAGCACAAGCAAGTTCGGACCAGCGCACCTGATAAGATATTGCCCAGTGTGTTTCG TCCCAACAAAGGAAGAAGTG
Downstream 100 bases:
>100_bases TCGGCAGCACACAACCAAATCGCACAGAAGCCCCGGAATCCGTTCAATCGGTTCCGGGGCTTCGTCATATGTCTCATAAT CGCGTCCACTTACATCCACC
Product: narrowly conserved hypothetical transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MAEKDAKPKKQSTIKQIIQIYKYTAKEDKALPWLEAGAFLLPVVVTIIIGLIVKWTWLIWIFTMITAIMLGILLATMMLT RRADAVGYKQIDGKPGAAIGVLSNMQKAGFDFPQEPAWIDPKTKDAIWRGTSMNGIYLIGEGEYGRVMKAMDRQERDIKG VTAGSSIPVYRIAVGHGPKQVPLAKLRSTVIKSKSYEPTHHKNALIAKIHPRRRFLLTKAEMETLNDRLRTLQAKKGYAI PKGMDPNRPQKISRRAMRGR
Sequences:
>Translated_260_residues MAEKDAKPKKQSTIKQIIQIYKYTAKEDKALPWLEAGAFLLPVVVTIIIGLIVKWTWLIWIFTMITAIMLGILLATMMLT RRADAVGYKQIDGKPGAAIGVLSNMQKAGFDFPQEPAWIDPKTKDAIWRGTSMNGIYLIGEGEYGRVMKAMDRQERDIKG VTAGSSIPVYRIAVGHGPKQVPLAKLRSTVIKSKSYEPTHHKNALIAKIHPRRRFLLTKAEMETLNDRLRTLQAKKGYAI PKGMDPNRPQKISRRAMRGR >Mature_259_residues AEKDAKPKKQSTIKQIIQIYKYTAKEDKALPWLEAGAFLLPVVVTIIIGLIVKWTWLIWIFTMITAIMLGILLATMMLTR RADAVGYKQIDGKPGAAIGVLSNMQKAGFDFPQEPAWIDPKTKDAIWRGTSMNGIYLIGEGEYGRVMKAMDRQERDIKGV TAGSSIPVYRIAVGHGPKQVPLAKLRSTVIKSKSYEPTHHKNALIAKIHPRRRFLLTKAEMETLNDRLRTLQAKKGYAIP KGMDPNRPQKISRRAMRGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021315 [H]
Pfam domain/function: PF11139 DUF2910 [H]
EC number: NA
Molecular weight: Translated: 29265; Mature: 29134
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKDAKPKKQSTIKQIIQIYKYTAKEDKALPWLEAGAFLLPVVVTIIIGLIVKWTWLIW CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFTMITAIMLGILLATMMLTRRADAVGYKQIDGKPGAAIGVLSNMQKAGFDFPQEPAWID HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC PKTKDAIWRGTSMNGIYLIGEGEYGRVMKAMDRQERDIKGVTAGSSIPVYRIAVGHGPKQ CCCCHHEECCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC VPLAKLRSTVIKSKSYEPTHHKNALIAKIHPRRRFLLTKAEMETLNDRLRTLQAKKGYAI CHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PKGMDPNRPQKISRRAMRGR CCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure AEKDAKPKKQSTIKQIIQIYKYTAKEDKALPWLEAGAFLLPVVVTIIIGLIVKWTWLIW CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFTMITAIMLGILLATMMLTRRADAVGYKQIDGKPGAAIGVLSNMQKAGFDFPQEPAWID HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC PKTKDAIWRGTSMNGIYLIGEGEYGRVMKAMDRQERDIKGVTAGSSIPVYRIAVGHGPKQ CCCCHHEECCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC VPLAKLRSTVIKSKSYEPTHHKNALIAKIHPRRRFLLTKAEMETLNDRLRTLQAKKGYAI CHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PKGMDPNRPQKISRRAMRGR CCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]