| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is argR [H]
Identifier: 213692742
GI number: 213692742
Start: 2045415
End: 2045927
Strand: Reverse
Name: argR [H]
Synonym: Blon_1876
Alternate gene names: 213692742
Gene position: 2045927-2045415 (Counterclockwise)
Preceding gene: 213692743
Following gene: 213692741
Centisome position: 72.22
GC content: 62.18
Gene sequence:
>513_bases ATGAGTGAAACCGGTCCGTCCCTGCAGCGCCCTGCCACCAGGGCGGCGCGGCTGAGTGCCATAGAACAGGCGCTCGCCAC GCATATCATCACCTCGCAATCACAGCTGTCCAAAATCCTTATCGACGAGGGCATTGCGGTGACTCAGGCGACCCTGAGCC GCGATCTTGACGAGATGCATGCGGTGAAGACCCGGCTGAAGGACGGCACGGTGGCCTACACGGTGGGTCGCAGCGCCGTT GCTTCAGAAGGTGAGGATGTAGGGGAGCGCGGTGAGGCACAGATGTCCCGCGTGCTGAACGGACTGGTCACCTCGGTGGC CGCCGCCGGAAATCTGGTTGTGGTGCACACGCCTTCCGGTGCCGCACAATACGTGGCCTCGGTGATTGACAGGCAGCCGA TCGAAGGCGTGCTGGGCACCATCGCTGGAGACGACACCGTCATGGTGATTTGCACCAATGACGACACCGCTGTCTCCCGC TCCGACTGGCTACTAAGCCTCGCCTCCAAATAA
Upstream 100 bases:
>100_bases AGTCCGTGGTATGGGACGAGGCCGAGAACCGTCTGCACGCACAGAAAGCGTTGCTGACTTGGTTGACCGGCAAGGCCCGT GGAGACGAAAGCCTGCTCGC
Downstream 100 bases:
>100_bases CCAACACGCCGTGCATAAATATACAGTCCTCTGTATATACTTGCATCAGTTTGTTTTTTAGACCTTGAACGAAAGGGAAC CAATGGCAGATAACAAGCGC
Product: arginine repressor, ArgR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSETGPSLQRPATRAARLSAIEQALATHIITSQSQLSKILIDEGIAVTQATLSRDLDEMHAVKTRLKDGTVAYTVGRSAV ASEGEDVGERGEAQMSRVLNGLVTSVAAAGNLVVVHTPSGAAQYVASVIDRQPIEGVLGTIAGDDTVMVICTNDDTAVSR SDWLLSLASK
Sequences:
>Translated_170_residues MSETGPSLQRPATRAARLSAIEQALATHIITSQSQLSKILIDEGIAVTQATLSRDLDEMHAVKTRLKDGTVAYTVGRSAV ASEGEDVGERGEAQMSRVLNGLVTSVAAAGNLVVVHTPSGAAQYVASVIDRQPIEGVLGTIAGDDTVMVICTNDDTAVSR SDWLLSLASK >Mature_169_residues SETGPSLQRPATRAARLSAIEQALATHIITSQSQLSKILIDEGIAVTQATLSRDLDEMHAVKTRLKDGTVAYTVGRSAVA SEGEDVGERGEAQMSRVLNGLVTSVAAAGNLVVVHTPSGAAQYVASVIDRQPIEGVLGTIAGDDTVMVICTNDDTAVSRS DWLLSLASK
Specific function: Regulates arginine biosynthesis genes [H]
COG id: COG1438
COG function: function code K; Arginine repressor
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001669 - InterPro: IPR020899 - InterPro: IPR020900 - InterPro: IPR011991 - ProDom: PD007402 [H]
Pfam domain/function: PF01316 Arg_repressor; PF02863 Arg_repressor_C [H]
EC number: NA
Molecular weight: Translated: 17744; Mature: 17613
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETGPSLQRPATRAARLSAIEQALATHIITSQSQLSKILIDEGIAVTQATLSRDLDEMH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHH AVKTRLKDGTVAYTVGRSAVASEGEDVGERGEAQMSRVLNGLVTSVAAAGNLVVVHTPSG HHHHHHCCCCEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC AAQYVASVIDRQPIEGVLGTIAGDDTVMVICTNDDTAVSRSDWLLSLASK HHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHCCCC >Mature Secondary Structure SETGPSLQRPATRAARLSAIEQALATHIITSQSQLSKILIDEGIAVTQATLSRDLDEMH CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHH AVKTRLKDGTVAYTVGRSAVASEGEDVGERGEAQMSRVLNGLVTSVAAAGNLVVVHTPSG HHHHHHCCCCEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC AAQYVASVIDRQPIEGVLGTIAGDDTVMVICTNDDTAVSRSDWLLSLASK HHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA