Click here to switch to the map view.

The map label for this gene is nreC [H]

Identifier: 213692616

GI number: 213692616

Start: 1922537

End: 1923202

Strand: Reverse

Name: nreC [H]

Synonym: Blon_1749

Alternate gene names: 213692616

Gene position: 1923202-1922537 (Counterclockwise)

Preceding gene: 213692620

Following gene: 213692615

Centisome position: 67.89

GC content: 55.26

Gene sequence:

>666_bases
ATGAAGAACGGGCGCCCGATTCGGCTTGCCTTGGTGGACAACGATCGTTGCTCTGCGGAGATGATGGCTTTGCTTATTGG
CAGGACGATTCCCGAGGCACACATGCTATGGGTTACGGATAATCCCAGTCTTGCCTTGGAACGTTGTCTGTTCGATCCGC
GGAAGCCGGACATCCTTATTTGCGATCTCATGATGGACGGGCTGAACGGAGTGCGGCTGACGGAACGTATCCGACAGCGG
AACGTGCAGGTTGGCGTCATCGTAGTCACTTCGTATGACCTGGCAACCTATGGTGAGGATATCGCGTGTTGCGGAGCCCA
AGCGTTGATTTCGAAAAGAGATTTCGCAGCGACCATACGCGAGGCGGTCAAATCGGTGTTTGACGGGGGAACATACCCTC
ATGGTTGGGGTTTGCATAGCCTTGAAGAGACATTGCATACGGTGGATGCCGCACAGCCGGAAGCGGATGGTGCCAGGCTC
TTCTCCGATCGAGAGCTGGCGGTGTTGCGTCTCTATGCACATCGTGTACCGACCGTTGAAATTGCGCGCCGCTTGGGAAT
CGGTGTCGAAACTGTGTACAGCTATGTGAAACGAGCCATGCGCAAGGTCGGTGTTACGAGGCGCGGCGAACTCCTTGATT
ACTGTGAGCGATACCATGTCCTGTGA

Upstream 100 bases:

>100_bases
ACGGTAAGACGCCAATGAGGAGCGAACGAAGTCTGTGTGACGGGAATCGTCACAGTGCTACGATTGCGTTTGACGGAGGC
GATTTGGGGAGGGGGTACTT

Downstream 100 bases:

>100_bases
CGGCAGCCGTTTTCTTAGACGCCGCTTCCGCGATTTCGGGAAGTCTTGGCATGGCGAAAAGATCGCGGCGCTAGCCTGCG
CCTTGTGCATAGCCGCTGAT

Product: two component transcriptional regulator, LuxR family

Products: NA

Alternate protein names: Nitrogen regulation protein C [H]

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKNGRPIRLALVDNDRCSAEMMALLIGRTIPEAHMLWVTDNPSLALERCLFDPRKPDILICDLMMDGLNGVRLTERIRQR
NVQVGVIVVTSYDLATYGEDIACCGAQALISKRDFAATIREAVKSVFDGGTYPHGWGLHSLEETLHTVDAAQPEADGARL
FSDRELAVLRLYAHRVPTVEIARRLGIGVETVYSYVKRAMRKVGVTRRGELLDYCERYHVL

Sequences:

>Translated_221_residues
MKNGRPIRLALVDNDRCSAEMMALLIGRTIPEAHMLWVTDNPSLALERCLFDPRKPDILICDLMMDGLNGVRLTERIRQR
NVQVGVIVVTSYDLATYGEDIACCGAQALISKRDFAATIREAVKSVFDGGTYPHGWGLHSLEETLHTVDAAQPEADGARL
FSDRELAVLRLYAHRVPTVEIARRLGIGVETVYSYVKRAMRKVGVTRRGELLDYCERYHVL
>Mature_221_residues
MKNGRPIRLALVDNDRCSAEMMALLIGRTIPEAHMLWVTDNPSLALERCLFDPRKPDILICDLMMDGLNGVRLTERIRQR
NVQVGVIVVTSYDLATYGEDIACCGAQALISKRDFAATIREAVKSVFDGGTYPHGWGLHSLEETLHTVDAAQPEADGARL
FSDRELAVLRLYAHRVPTVEIARRLGIGVETVYSYVKRAMRKVGVTRRGELLDYCERYHVL

Specific function: Member of the two-component regulatory system nreB/nreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. Phosphorylated nreC binds to a GC-rich palindromic sequence at the promoters of the nitrate (narGHJI) and nit

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788712, Length=167, Percent_Identity=26.9461077844311, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24814; Mature: 24814

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNGRPIRLALVDNDRCSAEMMALLIGRTIPEAHMLWVTDNPSLALERCLFDPRKPDILI
CCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCEEE
CDLMMDGLNGVRLTERIRQRNVQVGVIVVTSYDLATYGEDIACCGAQALISKRDFAATIR
HHHHHCCCCCHHHHHHHHHCCCEEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHH
EAVKSVFDGGTYPHGWGLHSLEETLHTVDAAQPEADGARLFSDRELAVLRLYAHRVPTVE
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHCCCHHH
IARRLGIGVETVYSYVKRAMRKVGVTRRGELLDYCERYHVL
HHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKNGRPIRLALVDNDRCSAEMMALLIGRTIPEAHMLWVTDNPSLALERCLFDPRKPDILI
CCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCEEE
CDLMMDGLNGVRLTERIRQRNVQVGVIVVTSYDLATYGEDIACCGAQALISKRDFAATIR
HHHHHCCCCCHHHHHHHHHCCCEEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHH
EAVKSVFDGGTYPHGWGLHSLEETLHTVDAAQPEADGARLFSDRELAVLRLYAHRVPTVE
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHCCCHHH
IARRLGIGVETVYSYVKRAMRKVGVTRRGELLDYCERYHVL
HHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12426351 [H]