| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692615
Identifier: 213692615
GI number: 213692615
Start: 1921312
End: 1922547
Strand: Reverse
Name: 213692615
Synonym: Blon_1748
Alternate gene names: NA
Gene position: 1922547-1921312 (Counterclockwise)
Preceding gene: 213692616
Following gene: 213692614
Centisome position: 67.87
GC content: 57.69
Gene sequence:
>1236_bases ATGTCCTGTGACGGCAGCCGTTTTCTTAGACGCCGCTTCCGCGATTTCGGGAAGTCTTGGCATGGCGAAAAGATCGCGGC GCTAGCCTGCGCCTTGTGCATAGCCGCTGATACGGTCATCGAATCGTGTATCAATCCGGTTTGGGATGCGTGGACCCTGT GGGTGGGTCTGTTGTTCGTCATCCTGTCGTTGCTCTGCGTGGCATTCCCGTTCGGCGGCAATATCGCGTTGGCGATCTCA TGGTGCGTGGTGTTCCCCTTGCCGGTGGATCTGTCCATGTCGGTGAGCGTGGTGATAGCCGAGCCATTAATCGTTCTCTC CTATCAACGCATATGGTGCGGCGTGGTGTTGGCGGTGGCTGTGACCGTATCTCGCGTGGCGCAGCTGATATGGCAGTATG GGTTGCCGATGGATTGGGATGCCGGGGCGTTGGTGTCCGTTGTGCCTTGGACCGTCATGCCGGCGTTGGCGTGCGTTGGA ATCGGTCTGCTGCTGAATTGGCATCATCGTGAGGGGGAGAGGGAGTCGGAAGCGCGTGGCAGGGCCGAATCGTTGGATCT GGCGGCAAGGCTGCATGATGCGACGACCAATGATCTCTCATATCTCATCATGAGCATCGACAGGATCATGTCGGAACACC CTTCGCAAGGAGAGTCGATGGACTTGCCACTGTTGCGCGAAGTGGCTCAACGGGCGCTCGATCAGACGCATGATGTCATA GCGGTTCTCGCAAAGCACAATGTCGGCACTGCGCGAATCCCGCGATGCCATGCGCGTCGCTCCGGAGAAGCCATCGTTCC GATCGGTGCAGGTCGATTCGAGGCCGAGATCGAACGGCACCGGCGGGAACTCGCAGCGCTTGGTTTCCGAGGCGAGGTGG TTGTGTCCGATCCCTTCGATCTCCTGAGTCGGTTTGACGAGAAGACTATCCAGTTGACGCGGTCGTTGCTGGAAGAGACG TTTGCCAATATCGCCAAGCACGCGGATCGCGAACAAGGGTATGTGCTCGCCATACAAGTGCGGCAAGACGGACTGTACGT ATCGGTGGCTGACGTTCCCGCCAAGATGGCGGATGGAGCATTGACGGAATCTCCGAGAACATTGGGCATGGGATTTGGAA TGTCTCATCTGCGTCAATCAATTACGCGGAGCGGTGGTTGGCTGCGCGTCCAAGAGGAAGACGGGTATTGGAGTTGCCTA GCGTATATTCCGATATATCATCGGGATACAGCGTGA
Upstream 100 bases:
>100_bases GGAATCGGTGTCGAAACTGTGTACAGCTATGTGAAACGAGCCATGCGCAAGGTCGGTGTTACGAGGCGCGGCGAACTCCT TGATTACTGTGAGCGATACC
Downstream 100 bases:
>100_bases ATCGGAAGGAAACAGCGCATGGGATTCAACATCGAACGTGTGGACAAGCCGTTTGTGGTCAAATCGCCGTACCAACCATC CGGAGACCAGCCGAAGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MSCDGSRFLRRRFRDFGKSWHGEKIAALACALCIAADTVIESCINPVWDAWTLWVGLLFVILSLLCVAFPFGGNIALAIS WCVVFPLPVDLSMSVSVVIAEPLIVLSYQRIWCGVVLAVAVTVSRVAQLIWQYGLPMDWDAGALVSVVPWTVMPALACVG IGLLLNWHHREGERESEARGRAESLDLAARLHDATTNDLSYLIMSIDRIMSEHPSQGESMDLPLLREVAQRALDQTHDVI AVLAKHNVGTARIPRCHARRSGEAIVPIGAGRFEAEIERHRRELAALGFRGEVVVSDPFDLLSRFDEKTIQLTRSLLEET FANIAKHADREQGYVLAIQVRQDGLYVSVADVPAKMADGALTESPRTLGMGFGMSHLRQSITRSGGWLRVQEEDGYWSCL AYIPIYHRDTA
Sequences:
>Translated_411_residues MSCDGSRFLRRRFRDFGKSWHGEKIAALACALCIAADTVIESCINPVWDAWTLWVGLLFVILSLLCVAFPFGGNIALAIS WCVVFPLPVDLSMSVSVVIAEPLIVLSYQRIWCGVVLAVAVTVSRVAQLIWQYGLPMDWDAGALVSVVPWTVMPALACVG IGLLLNWHHREGERESEARGRAESLDLAARLHDATTNDLSYLIMSIDRIMSEHPSQGESMDLPLLREVAQRALDQTHDVI AVLAKHNVGTARIPRCHARRSGEAIVPIGAGRFEAEIERHRRELAALGFRGEVVVSDPFDLLSRFDEKTIQLTRSLLEET FANIAKHADREQGYVLAIQVRQDGLYVSVADVPAKMADGALTESPRTLGMGFGMSHLRQSITRSGGWLRVQEEDGYWSCL AYIPIYHRDTA >Mature_410_residues SCDGSRFLRRRFRDFGKSWHGEKIAALACALCIAADTVIESCINPVWDAWTLWVGLLFVILSLLCVAFPFGGNIALAISW CVVFPLPVDLSMSVSVVIAEPLIVLSYQRIWCGVVLAVAVTVSRVAQLIWQYGLPMDWDAGALVSVVPWTVMPALACVGI GLLLNWHHREGERESEARGRAESLDLAARLHDATTNDLSYLIMSIDRIMSEHPSQGESMDLPLLREVAQRALDQTHDVIA VLAKHNVGTARIPRCHARRSGEAIVPIGAGRFEAEIERHRRELAALGFRGEVVVSDPFDLLSRFDEKTIQLTRSLLEETF ANIAKHADREQGYVLAIQVRQDGLYVSVADVPAKMADGALTESPRTLGMGFGMSHLRQSITRSGGWLRVQEEDGYWSCLA YIPIYHRDTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45545; Mature: 45414
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS01244 ACONITASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCDGSRFLRRRFRDFGKSWHGEKIAALACALCIAADTVIESCINPVWDAWTLWVGLLFV CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILSLLCVAFPFGGNIALAISWCVVFPLPVDLSMSVSVVIAEPLIVLSYQRIWCGVVLAVA HHHHHHHHCCCCCCHHHEEHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH VTVSRVAQLIWQYGLPMDWDAGALVSVVPWTVMPALACVGIGLLLNWHHREGERESEARG HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC RAESLDLAARLHDATTNDLSYLIMSIDRIMSEHPSQGESMDLPLLREVAQRALDQTHDVI CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AVLAKHNVGTARIPRCHARRSGEAIVPIGAGRFEAEIERHRRELAALGFRGEVVVSDPFD HHHHHCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEECCHHH LLSRFDEKTIQLTRSLLEETFANIAKHADREQGYVLAIQVRQDGLYVSVADVPAKMADGA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCHHHHCCC LTESPRTLGMGFGMSHLRQSITRSGGWLRVQEEDGYWSCLAYIPIYHRDTA CCCCCCHHCCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEEEECCCC >Mature Secondary Structure SCDGSRFLRRRFRDFGKSWHGEKIAALACALCIAADTVIESCINPVWDAWTLWVGLLFV CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILSLLCVAFPFGGNIALAISWCVVFPLPVDLSMSVSVVIAEPLIVLSYQRIWCGVVLAVA HHHHHHHHCCCCCCHHHEEHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH VTVSRVAQLIWQYGLPMDWDAGALVSVVPWTVMPALACVGIGLLLNWHHREGERESEARG HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC RAESLDLAARLHDATTNDLSYLIMSIDRIMSEHPSQGESMDLPLLREVAQRALDQTHDVI CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AVLAKHNVGTARIPRCHARRSGEAIVPIGAGRFEAEIERHRRELAALGFRGEVVVSDPFD HHHHHCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEECCHHH LLSRFDEKTIQLTRSLLEETFANIAKHADREQGYVLAIQVRQDGLYVSVADVPAKMADGA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCHHHHCCC LTESPRTLGMGFGMSHLRQSITRSGGWLRVQEEDGYWSCLAYIPIYHRDTA CCCCCCHHCCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA