| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is malZ [C]
Identifier: 213692507
GI number: 213692507
Start: 1788731
End: 1790026
Strand: Direct
Name: malZ [C]
Synonym: Blon_1636
Alternate gene names: 213692507
Gene position: 1788731-1790026 (Clockwise)
Preceding gene: 213692504
Following gene: 213692513
Centisome position: 63.14
GC content: 62.11
Gene sequence:
>1296_bases GTGGTTGTAAGCACGGATTCGAGCCGCACAATGCCCGATTGGGTGAAGTACGGGGTGTTCTGGCACGTGTATCCGCTGGG CTTCTGCGGTGCCGATATCAGGCCCGCCGGCCCGCGCCAGTTCCATGGCCGCGGCCTTGACGCGATGATCCCTTGGCTGG AGTACGTGCGCGATCTAGGCGCGTCCGGCCTGCTGCTGGGTCCGGTGTTCGAGTCGGCGACGCATGGATACGACACGCTT GACCATATGCACATCGATGTGCGATTGGGCGGGGATGCCGCGTTCGACCAGCTGATTGCGGCCTGCCGGGACATGGGATT GCAGGTGGTGCTGGATGGCGTGTTCAATCATGTGAGCCGCGATCATCCGGCCGTCCGGGCGGCGCTTGACGAGACCACCG GACGCTTGAATCCGGCCGACAACCCGTGGCATGGTCTGGTCCGCGCGCATGTCGGCGATAATGACGAACCCGCTTTGGAT GTGTTCGAGGGGCACGGGGATCTGGTGGCGCTGGACCATTCGGCTGACGAGACCGTTGACTATGTGGTCCATGTGATGAG CCATTGGCTGGATCGCGGAGCCGCCGGCTGGCGCCTCGACGCCGCGTATGCCGTGCCGAGCCCGTTCTGGGCGCGCGTGT TGCCGCAGGTCAAAGCCGCACACCCGTATTCGTGGATTTTCGGTGAGGTGATCCATGGCGATTACCCGCGCATCATCGAG GAATCCACGATGGATTCGATCACGCAATACGAGCTATGGAAGTCGATCCAGCATGCGCTGGAGACGGAGAACTTCTTCGA GCTGGATTGGAATCTCAAGCGGCACAACGCGTTCCTGAATTCCTTCGTGCCGCAGACGTTCATCGGCAACCATGACGTGA CGCGTATCGCATCGCAGATTGGCCCGGCCAAGGCGGCGTTGGCATTGGCGGTGCTCATGACGGTCGGCGGCGTGCCAAGC ATCTATTACGGCGACGAGCAGGGCTATGTGGGCGTCAAGCAGGAGCGTTTCGGCGGCGATGACGACGTACGTCCGAAGTT CCCCGACTCCCCTGCCGAACTGTCCACGCTGGGAGAGCCGACATACCGACTGCACCAGGCGCTGATCGCGCTGCGCCGTC GCAACCCATGGCTGATGGATGCGCGTACCGAGGCCGTGAAGCTGGAAAACAAGCACTTCGTCTATCGTTCGACGAGCGCC GACGCCCAGCATTCCCTGACCGTGGACCTCAACATCGAGCAATCCCCCACTTTCACCATCCGCAACGCCGACGGCAGTAC AGCGTATCAATACTGA
Upstream 100 bases:
>100_bases ATGCTTCGATTCGGCGCCTGCATCGACAACTCTCGTCATCTACCGAGGATTCGGTCATGCGTGTGCGAAAATGGACACGG TGTCAATCAGGAGGTGCACA
Downstream 100 bases:
>100_bases GCTACCTCATCAGAGGGAGCTCATCATTTACCGCCGAATGCCTCGGATCAGCAGGTCGAGCAGGTACCCGTACGACCGGT CGACCCGTTCGCGGCCGCGT
Product: alpha amylase, catalytic region
Products: NA
Alternate protein names: Glucan 1,4-alpha-maltohydrolase [H]
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MVVSTDSSRTMPDWVKYGVFWHVYPLGFCGADIRPAGPRQFHGRGLDAMIPWLEYVRDLGASGLLLGPVFESATHGYDTL DHMHIDVRLGGDAAFDQLIAACRDMGLQVVLDGVFNHVSRDHPAVRAALDETTGRLNPADNPWHGLVRAHVGDNDEPALD VFEGHGDLVALDHSADETVDYVVHVMSHWLDRGAAGWRLDAAYAVPSPFWARVLPQVKAAHPYSWIFGEVIHGDYPRIIE ESTMDSITQYELWKSIQHALETENFFELDWNLKRHNAFLNSFVPQTFIGNHDVTRIASQIGPAKAALALAVLMTVGGVPS IYYGDEQGYVGVKQERFGGDDDVRPKFPDSPAELSTLGEPTYRLHQALIALRRRNPWLMDARTEAVKLENKHFVYRSTSA DAQHSLTVDLNIEQSPTFTIRNADGSTAYQY
Sequences:
>Translated_431_residues MVVSTDSSRTMPDWVKYGVFWHVYPLGFCGADIRPAGPRQFHGRGLDAMIPWLEYVRDLGASGLLLGPVFESATHGYDTL DHMHIDVRLGGDAAFDQLIAACRDMGLQVVLDGVFNHVSRDHPAVRAALDETTGRLNPADNPWHGLVRAHVGDNDEPALD VFEGHGDLVALDHSADETVDYVVHVMSHWLDRGAAGWRLDAAYAVPSPFWARVLPQVKAAHPYSWIFGEVIHGDYPRIIE ESTMDSITQYELWKSIQHALETENFFELDWNLKRHNAFLNSFVPQTFIGNHDVTRIASQIGPAKAALALAVLMTVGGVPS IYYGDEQGYVGVKQERFGGDDDVRPKFPDSPAELSTLGEPTYRLHQALIALRRRNPWLMDARTEAVKLENKHFVYRSTSA DAQHSLTVDLNIEQSPTFTIRNADGSTAYQY >Mature_431_residues MVVSTDSSRTMPDWVKYGVFWHVYPLGFCGADIRPAGPRQFHGRGLDAMIPWLEYVRDLGASGLLLGPVFESATHGYDTL DHMHIDVRLGGDAAFDQLIAACRDMGLQVVLDGVFNHVSRDHPAVRAALDETTGRLNPADNPWHGLVRAHVGDNDEPALD VFEGHGDLVALDHSADETVDYVVHVMSHWLDRGAAGWRLDAAYAVPSPFWARVLPQVKAAHPYSWIFGEVIHGDYPRIIE ESTMDSITQYELWKSIQHALETENFFELDWNLKRHNAFLNSFVPQTFIGNHDVTRIASQIGPAKAALALAVLMTVGGVPS IYYGDEQGYVGVKQERFGGDDDVRPKFPDSPAELSTLGEPTYRLHQALIALRRRNPWLMDARTEAVKLENKHFVYRSTSA DAQHSLTVDLNIEQSPTFTIRNADGSTAYQY
Specific function: Converts starch into maltose [H]
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Escherichia coli, GI1786604, Length=393, Percent_Identity=28.498727735369, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1790687, Length=125, Percent_Identity=31.2, Blast_Score=66, Evalue=4e-12, Organism=Drosophila melanogaster, GI221330053, Length=404, Percent_Identity=25.4950495049505, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24586599, Length=221, Percent_Identity=28.0542986425339, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24586589, Length=390, Percent_Identity=24.1025641025641, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI45549022, Length=211, Percent_Identity=24.1706161137441, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24586597, Length=211, Percent_Identity=27.4881516587678, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR004185 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 - InterPro: IPR014756 [H]
Pfam domain/function: PF00128 Alpha-amylase; PF02903 Alpha-amylase_N [H]
EC number: =3.2.1.133 [H]
Molecular weight: Translated: 48100; Mature: 48100
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVSTDSSRTMPDWVKYGVFWHVYPLGFCGADIRPAGPRQFHGRGLDAMIPWLEYVRDLG CEECCCCCCCCHHHHHHCCEEEEEEHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC ASGLLLGPVFESATHGYDTLDHMHIDVRLGGDAAFDQLIAACRDMGLQVVLDGVFNHVSR CCCEEEHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHCC DHPAVRAALDETTGRLNPADNPWHGLVRAHVGDNDEPALDVFEGHGDLVALDHSADETVD CCHHHHHHHHHHCCCCCCCCCCHHHEEEEECCCCCCCCCEEEECCCCEEEEECCCHHHHH YVVHVMSHWLDRGAAGWRLDAAYAVPSPFWARVLPQVKAAHPYSWIFGEVIHGDYPRIIE HHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH ESTMDSITQYELWKSIQHALETENFFELDWNLKRHNAFLNSFVPQTFIGNHDVTRIASQI HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCHHHCCCCHHHHHHHHC GPAKAALALAVLMTVGGVPSIYYGDEQGYVGVKQERFGGDDDVRPKFPDSPAELSTLGEP CHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHCCCH TYRLHQALIALRRRNPWLMDARTEAVKLENKHFVYRSTSADAQHSLTVDLNIEQSPTFTI HHHHHHHHHHHHHCCCCEECCCCHHEEECCCEEEEECCCCCCCEEEEEEEEECCCCCEEE RNADGSTAYQY ECCCCCCCCCC >Mature Secondary Structure MVVSTDSSRTMPDWVKYGVFWHVYPLGFCGADIRPAGPRQFHGRGLDAMIPWLEYVRDLG CEECCCCCCCCHHHHHHCCEEEEEEHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC ASGLLLGPVFESATHGYDTLDHMHIDVRLGGDAAFDQLIAACRDMGLQVVLDGVFNHVSR CCCEEEHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHCC DHPAVRAALDETTGRLNPADNPWHGLVRAHVGDNDEPALDVFEGHGDLVALDHSADETVD CCHHHHHHHHHHCCCCCCCCCCHHHEEEEECCCCCCCCCEEEECCCCEEEEECCCHHHHH YVVHVMSHWLDRGAAGWRLDAAYAVPSPFWARVLPQVKAAHPYSWIFGEVIHGDYPRIIE HHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH ESTMDSITQYELWKSIQHALETENFFELDWNLKRHNAFLNSFVPQTFIGNHDVTRIASQI HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCHHHCCCCHHHHHHHHC GPAKAALALAVLMTVGGVPSIYYGDEQGYVGVKQERFGGDDDVRPKFPDSPAELSTLGEP CHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHCCCH TYRLHQALIALRRRNPWLMDARTEAVKLENKHFVYRSTSADAQHSLTVDLNIEQSPTFTI HHHHHHHHHHHHHCCCCEECCCCHHEEECCCEEEEECCCCCCCEEEEEEEEECCCCCEEE RNADGSTAYQY ECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA