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The map label for this gene is nifU [H]

Identifier: 213692461

GI number: 213692461

Start: 1741566

End: 1742120

Strand: Reverse

Name: nifU [H]

Synonym: Blon_1590

Alternate gene names: 213692461

Gene position: 1742120-1741566 (Counterclockwise)

Preceding gene: 213692462

Following gene: 213692460

Centisome position: 61.5

GC content: 59.28

Gene sequence:

>555_bases
ATGAACGAATTCGGTATGAGCGGGGATGACCTCGAACAGATGTACCAAGAGGTCATCCTCGAGGCGTCAAAACATCCGCA
TGGCAAGGAATCCTTTGCGCCCAACGCGGCGGTCGAACAGTCCGCGGACGCGGCGGCCAATGTCACCGTGCAAGCCAGCC
ACGAATACTGCACGCCCGGTGAATCGCACCAGTTCAACCCGACCTGCGGCGACGAGGCGACCATCCATGTCGAAGTCTCC
GATGACGAACCGCACACCATCAAGCGATTGGTGTGGGACGGCCACGGCTGCTCCATTTCGCAGGCCAGCCTGTCGGTGAT
GGTCGATCTGGTGGGCGGCAAAACCGTGGACGAGGCCATGGATCTGGAACAGACATTCCACAAGCTGATGGAATCGCGCG
GTGCCGGTCTGGACGACGAGAACCTGGAAGAAAAGCTCGGCGACGCCGTGGTATTCCAAGGCGTGTCGAAATACCCTATG
CGCATCAAATGCGCTCTGCTAGGCTGGGAAGGGCTGAAGGACTCCATCGCCAAAGCCCTCGCTGCAAAGAACTGA

Upstream 100 bases:

>100_bases
CCTCCTCCGGTGTCTACAATTCGGTCGAAGATGCCCAAGCATTGGTCGAAGCGGCCAAGGGTATCCGTAAGTTCTTTGGA
GTGGAGTAAAACAGATCACC

Downstream 100 bases:

>100_bases
GGAAATATGTCCAACGATAATTTGGTTCCCGAACCACAGCCATCCGTTTTCGATGCCGTCAACGGCGTCCTGCAGGACGA
GGAGGCCGCTCGCCGCGTGA

Product: SUF system FeS assembly protein, NifU family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MNEFGMSGDDLEQMYQEVILEASKHPHGKESFAPNAAVEQSADAAANVTVQASHEYCTPGESHQFNPTCGDEATIHVEVS
DDEPHTIKRLVWDGHGCSISQASLSVMVDLVGGKTVDEAMDLEQTFHKLMESRGAGLDDENLEEKLGDAVVFQGVSKYPM
RIKCALLGWEGLKDSIAKALAAKN

Sequences:

>Translated_184_residues
MNEFGMSGDDLEQMYQEVILEASKHPHGKESFAPNAAVEQSADAAANVTVQASHEYCTPGESHQFNPTCGDEATIHVEVS
DDEPHTIKRLVWDGHGCSISQASLSVMVDLVGGKTVDEAMDLEQTFHKLMESRGAGLDDENLEEKLGDAVVFQGVSKYPM
RIKCALLGWEGLKDSIAKALAAKN
>Mature_184_residues
MNEFGMSGDDLEQMYQEVILEASKHPHGKESFAPNAAVEQSADAAANVTVQASHEYCTPGESHQFNPTCGDEATIHVEVS
DDEPHTIKRLVWDGHGCSISQASLSVMVDLVGGKTVDEAMDLEQTFHKLMESRGAGLDDENLEEKLGDAVVFQGVSKYPM
RIKCALLGWEGLKDSIAKALAAKN

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 19934; Mature: 19934

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEFGMSGDDLEQMYQEVILEASKHPHGKESFAPNAAVEQSADAAANVTVQASHEYCTPG
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHEEEEEECCCCCCCC
ESHQFNPTCGDEATIHVEVSDDEPHTIKRLVWDGHGCSISQASLSVMVDLVGGKTVDEAM
CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
DLEQTFHKLMESRGAGLDDENLEEKLGDAVVFQGVSKYPMRIKCALLGWEGLKDSIAKAL
HHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHH
AAKN
HCCC
>Mature Secondary Structure
MNEFGMSGDDLEQMYQEVILEASKHPHGKESFAPNAAVEQSADAAANVTVQASHEYCTPG
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHEEEEEECCCCCCCC
ESHQFNPTCGDEATIHVEVSDDEPHTIKRLVWDGHGCSISQASLSVMVDLVGGKTVDEAM
CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
DLEQTFHKLMESRGAGLDDENLEEKLGDAVVFQGVSKYPMRIKCALLGWEGLKDSIAKAL
HHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHH
AAKN
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]