| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yitW [H]
Identifier: 213692460
GI number: 213692460
Start: 1740966
End: 1741559
Strand: Reverse
Name: yitW [H]
Synonym: Blon_1589
Alternate gene names: 213692460
Gene position: 1741559-1740966 (Counterclockwise)
Preceding gene: 213692461
Following gene: 213692457
Centisome position: 61.48
GC content: 61.78
Gene sequence:
>594_bases ATGTCCAACGATAATTTGGTTCCCGAACCACAGCCATCCGTTTTCGATGCCGTCAACGGCGTCCTGCAGGACGAGGAGGC CGCTCGCCGCGTGATGGCCAACCCGGCCTTGGCCAAGGGCTTCCCGAACGGACGCCCGATCGAGCACTCTGCTGCGTCCG GCGATGACACCTGTGCGTGTGGCGGTCACCATGGCAAATGCGGTTGCCGGGATGACGAACAGTCCGATGGCAGCGAGATT CCGATCAAGGCGATTGACGATATCGGCCGCGCCACTGCCGAAGACGTGCGCGAGGCACTGCATCAGGTGATTGATCCGGA GCTTGGCATCGACGTGATCGATTTGGGTCTGGTCTACGGCATTGAGATCGATGAGCTAGGCCGCGCCATTATTACGATGA CGCTGACCACGCCGGCCTGCCCGCTGACCGACCTTATCGAGGACGAATGCGCCTCCACACTGGCCGGTCTGGTCGAGGAG TTCCGCATCGACTGGACGTGGGACCCGCGCTGGACCATGGAGCGCATCACACCCGAAGGCCGCGACCAGCTCGCCGCCCT AGGCTTCAACTTCGACAACATGCCAAAGTACTGA
Upstream 100 bases:
>100_bases CGTGTCGAAATACCCTATGCGCATCAAATGCGCTCTGCTAGGCTGGGAAGGGCTGAAGGACTCCATCGCCAAAGCCCTCG CTGCAAAGAACTGAGGAAAT
Downstream 100 bases:
>100_bases TAGCGCTTAGTAAGCTCCCTCTGATGAGGGAGCTCTATACGAGAAAAGCCCCGCATGATACGGGGCTTTTCCATGTCTGG ACTGGTCAATCAGTCATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MSNDNLVPEPQPSVFDAVNGVLQDEEAARRVMANPALAKGFPNGRPIEHSAASGDDTCACGGHHGKCGCRDDEQSDGSEI PIKAIDDIGRATAEDVREALHQVIDPELGIDVIDLGLVYGIEIDELGRAIITMTLTTPACPLTDLIEDECASTLAGLVEE FRIDWTWDPRWTMERITPEGRDQLAALGFNFDNMPKY
Sequences:
>Translated_197_residues MSNDNLVPEPQPSVFDAVNGVLQDEEAARRVMANPALAKGFPNGRPIEHSAASGDDTCACGGHHGKCGCRDDEQSDGSEI PIKAIDDIGRATAEDVREALHQVIDPELGIDVIDLGLVYGIEIDELGRAIITMTLTTPACPLTDLIEDECASTLAGLVEE FRIDWTWDPRWTMERITPEGRDQLAALGFNFDNMPKY >Mature_196_residues SNDNLVPEPQPSVFDAVNGVLQDEEAARRVMANPALAKGFPNGRPIEHSAASGDDTCACGGHHGKCGCRDDEQSDGSEIP IKAIDDIGRATAEDVREALHQVIDPELGIDVIDLGLVYGIEIDELGRAIITMTLTTPACPLTDLIEDECASTLAGLVEEF RIDWTWDPRWTMERITPEGRDQLAALGFNFDNMPKY
Specific function: Unknown
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP18 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 21435; Mature: 21304
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDNLVPEPQPSVFDAVNGVLQDEEAARRVMANPALAKGFPNGRPIEHSAASGDDTCAC CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEEE GGHHGKCGCRDDEQSDGSEIPIKAIDDIGRATAEDVREALHQVIDPELGIDVIDLGLVYG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC IEIDELGRAIITMTLTTPACPLTDLIEDECASTLAGLVEEFRIDWTWDPRWTMERITPEG CCHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCC RDQLAALGFNFDNMPKY CHHHHHHCCCCCCCCCC >Mature Secondary Structure SNDNLVPEPQPSVFDAVNGVLQDEEAARRVMANPALAKGFPNGRPIEHSAASGDDTCAC CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEEE GGHHGKCGCRDDEQSDGSEIPIKAIDDIGRATAEDVREALHQVIDPELGIDVIDLGLVYG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC IEIDELGRAIITMTLTTPACPLTDLIEDECASTLAGLVEEFRIDWTWDPRWTMERITPEG CCHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCC RDQLAALGFNFDNMPKY CHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9025291; 9384377 [H]