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The map label for this gene is oppA [H]

Identifier: 213692353

GI number: 213692353

Start: 1643539

End: 1645251

Strand: Reverse

Name: oppA [H]

Synonym: Blon_1480

Alternate gene names: 213692353

Gene position: 1645251-1643539 (Counterclockwise)

Preceding gene: 213692354

Following gene: 213692352

Centisome position: 58.08

GC content: 57.21

Gene sequence:

>1713_bases
ATGGTTAACATGAAGCTCCTATGGTGCCTTTCGTCGCCAAAAAGACGACGCCAAAATATTCGGGAGAGATTCTTGAACAC
ACGTCATGTCACTGCACTGGTCGCGGCCGGTGCGGCAATCGTCATGCTGCTCAGCGGCTGCGGATCGACCGGCATCTCCA
ATTCCAGTAATGCTTCAGATTCCAACATCATTTCCGTGTACGGCAGTGAGCCGGCACACCCACTATTCCCCGGCAACACC
ACTGAGGCCGGTGGCGGCAAGGTTGTAGACCAGCTGTTCGCCGGTCTGGTGACCTATGATGCGCGGGGCGGCATCCACAA
CGAGGTAGCAGACAGCATCACCTCCAGCGACAACGCCACGCATTACGTCATCAAGCTCAAGAGCGGATGGAAGTTCACCG
ATGGCACTCCGGTGACCGCGCGCTCCTTCGTAGACGCTTGGAATTACACCGCCAACAGTGCCAACAAGCAGGCCAGCGCC
AGCTTCTTCAGCACAATCGAAGGCTATGATGATCTGCAAAAGCCGGACGTGGACCCCAAGGCCACGCTGAGCGGCCTGAC
CGTCGTTGACGACAACACCATCGATGTCAAGCTCAGCCAGCCCGACTCGGCATTCCCGGTCAAGGCCGGCAGCCACGCCT
ACATGCCGTTGCCCGAATCCGCGTTCAAGGACCCGAAGAAGTTCGGTCAGCACCCAGTGAGCAACGGCCCATACAAGTTC
GTGTCCTGGCAGCACAACCACAGCATCGAAATGGTGAAGAACCCTGACTACAAGGGCAATCGTGTCGCCAAGAACGATGG
CCTGAACTTCAAGATCTACACCTCGCCTGATTCGGCATACGCCGACCTACGCGGTGGCAACCTGGACTTCACGAGCACGA
TTCCTGACACCGCACTTACCTCCTTCCAATCCGACAAGTCGCTGAAGGCATACAACGAGCCCGGTGGCAATACGCTCACC
TTCACCATTCCTGAATGGCTGGAACATTTCGGCCAGAACGAGGAAGGCAACCTGCGTCGTCAGGCCATTTCCATGTCCAT
CGACCGTAAGACCATCGCCGAGAAGATCTTCCACGGCACCGCCACGCCCGCCGTCGACTTCCTTGCAGCCCCAATCAGCG
CCTACTCCAAGGAACTCAAGGGAAATGAAGTACTGAAGTACAACCCGTCCAAGGCCAAGGAACTGTGGGCCAAGGCCAAC
GCCATCTCCCCGTGGAGCGGTGAGTTCGGCATTGCGTACAATGCTGATGGCACTGCGAAGAACTGGGTTGAGGCAATCTG
CAACTACATCAAGAACACGCTGGATATCGATGCCAAGAGCATCCCGATGTCCACTTCCGACGAATTCCTGTCCAATGTGG
ATTCAGGCAAGATGACCTCCGCATACCGCAGCGGTTGGGGCCCTGATTATCCATCCGCGGACAACTATCTGATACAGCTG
TACGATTCCAGTTCGGCCGACGGCAAGGGCGGCAACAGCGGCAACTACAAGAACCCCGATTTCGATGCCATGATGGACAA
GGCTCTTTCCGCTCCGTCCACCGAGGAAGCCGACAAGTATTATCAGCAAGGTGAGGAGATTCTGCTGCAGGACCTTCCGG
CTATCCCGTTGTGGAACCAGAATGCCACCGCAGCCAGCACCTCCGCAGTCTCCGGCGTCGCATTCGACTACGGCGGCGGC
CCAGTGTTCACCGCACTGACCAAGAAGCAGTAA

Upstream 100 bases:

>100_bases
AACATGAAAATCCCTTCTTCGTGAGGGGATTTTTGCGTTTCTGGGATTAATTACTGCCTTGAGTCTTCAGTAATGTCTAT
ATTTCGAGAATATTGCATAC

Downstream 100 bases:

>100_bases
GCAGTAAGTAATAAACAGACAGCGCTAGCCCCCCGCTGGCGGGGGCTGTCGGCAAAGCCGACTGGGGGTGGTCTCAAACA
GCAGACCACCCCTAATCTTG

Product: extracellular solute-binding protein, family 5

Products: NA

Alternate protein names: Stage 0 sporulation protein KA [H]

Number of amino acids: Translated: 570; Mature: 570

Protein sequence:

>570_residues
MVNMKLLWCLSSPKRRRQNIRERFLNTRHVTALVAAGAAIVMLLSGCGSTGISNSSNASDSNIISVYGSEPAHPLFPGNT
TEAGGGKVVDQLFAGLVTYDARGGIHNEVADSITSSDNATHYVIKLKSGWKFTDGTPVTARSFVDAWNYTANSANKQASA
SFFSTIEGYDDLQKPDVDPKATLSGLTVVDDNTIDVKLSQPDSAFPVKAGSHAYMPLPESAFKDPKKFGQHPVSNGPYKF
VSWQHNHSIEMVKNPDYKGNRVAKNDGLNFKIYTSPDSAYADLRGGNLDFTSTIPDTALTSFQSDKSLKAYNEPGGNTLT
FTIPEWLEHFGQNEEGNLRRQAISMSIDRKTIAEKIFHGTATPAVDFLAAPISAYSKELKGNEVLKYNPSKAKELWAKAN
AISPWSGEFGIAYNADGTAKNWVEAICNYIKNTLDIDAKSIPMSTSDEFLSNVDSGKMTSAYRSGWGPDYPSADNYLIQL
YDSSSADGKGGNSGNYKNPDFDAMMDKALSAPSTEEADKYYQQGEEILLQDLPAIPLWNQNATAASTSAVSGVAFDYGGG
PVFTALTKKQ

Sequences:

>Translated_570_residues
MVNMKLLWCLSSPKRRRQNIRERFLNTRHVTALVAAGAAIVMLLSGCGSTGISNSSNASDSNIISVYGSEPAHPLFPGNT
TEAGGGKVVDQLFAGLVTYDARGGIHNEVADSITSSDNATHYVIKLKSGWKFTDGTPVTARSFVDAWNYTANSANKQASA
SFFSTIEGYDDLQKPDVDPKATLSGLTVVDDNTIDVKLSQPDSAFPVKAGSHAYMPLPESAFKDPKKFGQHPVSNGPYKF
VSWQHNHSIEMVKNPDYKGNRVAKNDGLNFKIYTSPDSAYADLRGGNLDFTSTIPDTALTSFQSDKSLKAYNEPGGNTLT
FTIPEWLEHFGQNEEGNLRRQAISMSIDRKTIAEKIFHGTATPAVDFLAAPISAYSKELKGNEVLKYNPSKAKELWAKAN
AISPWSGEFGIAYNADGTAKNWVEAICNYIKNTLDIDAKSIPMSTSDEFLSNVDSGKMTSAYRSGWGPDYPSADNYLIQL
YDSSSADGKGGNSGNYKNPDFDAMMDKALSAPSTEEADKYYQQGEEILLQDLPAIPLWNQNATAASTSAVSGVAFDYGGG
PVFTALTKKQ
>Mature_570_residues
MVNMKLLWCLSSPKRRRQNIRERFLNTRHVTALVAAGAAIVMLLSGCGSTGISNSSNASDSNIISVYGSEPAHPLFPGNT
TEAGGGKVVDQLFAGLVTYDARGGIHNEVADSITSSDNATHYVIKLKSGWKFTDGTPVTARSFVDAWNYTANSANKQASA
SFFSTIEGYDDLQKPDVDPKATLSGLTVVDDNTIDVKLSQPDSAFPVKAGSHAYMPLPESAFKDPKKFGQHPVSNGPYKF
VSWQHNHSIEMVKNPDYKGNRVAKNDGLNFKIYTSPDSAYADLRGGNLDFTSTIPDTALTSFQSDKSLKAYNEPGGNTLT
FTIPEWLEHFGQNEEGNLRRQAISMSIDRKTIAEKIFHGTATPAVDFLAAPISAYSKELKGNEVLKYNPSKAKELWAKAN
AISPWSGEFGIAYNADGTAKNWVEAICNYIKNTLDIDAKSIPMSTSDEFLSNVDSGKMTSAYRSGWGPDYPSADNYLIQL
YDSSSADGKGGNSGNYKNPDFDAMMDKALSAPSTEEADKYYQQGEEILLQDLPAIPLWNQNATAASTSAVSGVAFDYGGG
PVFTALTKKQ

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, It binds peptides up to five amino acids long with high affinity. Also required for sporulation and competence [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87081878, Length=490, Percent_Identity=23.6734693877551, Blast_Score=110, Evalue=4e-25,
Organism=Escherichia coli, GI1787052, Length=532, Percent_Identity=23.3082706766917, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI1789397, Length=482, Percent_Identity=24.4813278008299, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI1787495, Length=537, Percent_Identity=24.7672253258845, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787762, Length=534, Percent_Identity=24.1573033707865, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1789966, Length=502, Percent_Identity=20.1195219123506, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 61734; Mature: 61734

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNMKLLWCLSSPKRRRQNIRERFLNTRHVTALVAAGAAIVMLLSGCGSTGISNSSNASD
CCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SNIISVYGSEPAHPLFPGNTTEAGGGKVVDQLFAGLVTYDARGGIHNEVADSITSSDNAT
CCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCCE
HYVIKLKSGWKFTDGTPVTARSFVDAWNYTANSANKQASASFFSTIEGYDDLQKPDVDPK
EEEEEECCCCEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHCCCCCCCCC
ATLSGLTVVDDNTIDVKLSQPDSAFPVKAGSHAYMPLPESAFKDPKKFGQHPVSNGPYKF
HHHCCEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCCCCCCCEEE
VSWQHNHSIEMVKNPDYKGNRVAKNDGLNFKIYTSPDSAYADLRGGNLDFTSTIPDTALT
EEEECCCCEEEEECCCCCCCEEECCCCCEEEEEECCCCCHHHCCCCCEEECCCCCHHHHH
SFQSDKSLKAYNEPGGNTLTFTIPEWLEHFGQNEEGNLRRQAISMSIDRKTIAEKIFHGT
HHCCCCCCCCCCCCCCCEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
ATPAVDFLAAPISAYSKELKGNEVLKYNPSKAKELWAKANAISPWSGEFGIAYNADGTAK
CCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCEEECCCCCHH
NWVEAICNYIKNTLDIDAKSIPMSTSDEFLSNVDSGKMTSAYRSGWGPDYPSADNYLIQL
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCEEEEE
YDSSSADGKGGNSGNYKNPDFDAMMDKALSAPSTEEADKYYQQGEEILLQDLPAIPLWNQ
EECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
NATAASTSAVSGVAFDYGGGPVFTALTKKQ
CCCCCCCHHHCCEEEECCCCCEEEEEECCC
>Mature Secondary Structure
MVNMKLLWCLSSPKRRRQNIRERFLNTRHVTALVAAGAAIVMLLSGCGSTGISNSSNASD
CCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SNIISVYGSEPAHPLFPGNTTEAGGGKVVDQLFAGLVTYDARGGIHNEVADSITSSDNAT
CCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCCE
HYVIKLKSGWKFTDGTPVTARSFVDAWNYTANSANKQASASFFSTIEGYDDLQKPDVDPK
EEEEEECCCCEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHCCCCCCCCC
ATLSGLTVVDDNTIDVKLSQPDSAFPVKAGSHAYMPLPESAFKDPKKFGQHPVSNGPYKF
HHHCCEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCCCCCCCEEE
VSWQHNHSIEMVKNPDYKGNRVAKNDGLNFKIYTSPDSAYADLRGGNLDFTSTIPDTALT
EEEECCCCEEEEECCCCCCCEEECCCCCEEEEEECCCCCHHHCCCCCEEECCCCCHHHHH
SFQSDKSLKAYNEPGGNTLTFTIPEWLEHFGQNEEGNLRRQAISMSIDRKTIAEKIFHGT
HHCCCCCCCCCCCCCCCEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
ATPAVDFLAAPISAYSKELKGNEVLKYNPSKAKELWAKANAISPWSGEFGIAYNADGTAK
CCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCEEECCCCCHH
NWVEAICNYIKNTLDIDAKSIPMSTSDEFLSNVDSGKMTSAYRSGWGPDYPSADNYLIQL
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCEEEEE
YDSSSADGKGGNSGNYKNPDFDAMMDKALSAPSTEEADKYYQQGEEILLQDLPAIPLWNQ
EECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
NATAASTSAVSGVAFDYGGGPVFTALTKKQ
CCCCCCCHHHCCEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]