Click here to switch to the map view.

The map label for this gene is gltD [H]

Identifier: 213692354

GI number: 213692354

Start: 1645368

End: 1646903

Strand: Reverse

Name: gltD [H]

Synonym: Blon_1481

Alternate gene names: 213692354

Gene position: 1646903-1645368 (Counterclockwise)

Preceding gene: 213692355

Following gene: 213692353

Centisome position: 58.14

GC content: 64.39

Gene sequence:

>1536_bases
ATGGGCGACCCGAGAGGATTCCTGAAGGTCCGTACCCGCCGAGAGTTGGCTGAACGCCCCGTTGAGGAGCGTATCAAGGA
CTGGTTCGACGTTCACGCCGAAACCGGCCTGCAACCGTGGACCCAAACGCAGGCGGCCCGCTGCATGGATTGTGGCACCC
CGTTCTGCATGACCGGATGCCCGCTGGGTAACCTGATTCCCGAGTGGAACGACTTGGTCCGTCAGGGCAAGTGGGAAGAC
GCCTACAACCGTCTGTCCATGACCAACAACTTCCCCGAAGTCACCGGCCGCATCTGCCCGGCCCTGTGCGAGCAGGCCTG
CGTGCTCGGCATCCACCAGCCGCCGACCATGATCAAGCTTGACGAGCAGACCATCATCGACCAGGCATGGGATTTGGACT
ACGTCAAGCCGCTGCCGCCGCAGCGTCTGACCGACCAGACGGTCGCCATCGTCGGCTCCGGCCCTGCCGGCCTCGCCGCC
GCACAGCAGCTCACCCGCGCTGGCCACACTGTCGTCGTCTACGAGAAGGACGACGCCATCGGTGGTCTGATGCGTTACGG
CATCCCGAACTTCAAGCTTGAGAAGGGTCTGCTCGACCGCCGTGTCAAGCAGATGGAGGCCGAAGGCACCCGCTTCCGCA
CCAACGTGGAAATTGGCAAGGACATTACGTGGGATGACCTGCGTGACCGTTACGACGCCGTCGTGGTGGCCATCGGCTCC
CGCGTGCCGCGCGATATGAAGATTCCAGGCCGCGAGCTGGACGGCATCCACTTCGCCCTCGACTTCCTGCCCGACGCCAC
GCGCCGTATCTTCGGCGTCAAGCCGGTGCACGACATCACCGCCAAGGACAAGCACGTGGTGGTCATCGGCGGTGGCGACA
CCGGTTCCGACTGCCTTGGTACCTCCATCCGTCAGGGTGCGAAGGATGTCACCGTGCTGCAGATCATGCCGAAAGAGCCG
TCTTCACGCCCAGACAACAGCCCGTGGCCGACCTTCGCCCGCACCTACCAGAAGACCTCCTCCATGGAAGAGGGTGGCGA
GTACATCTACTCGACCGACTCGGTGAACTTCGAAGGCACCGAAGAGGAGAAGGCCAAGGTCACCATCGACAACTCGACCA
CCGCCGAAGGCTTCGTGGCCGATGAACACGGTCACGTCACCGGCCTGAAGGTCGTCTCTGTGGCCCCCGGCGAGAACGGC
CCCTTCACCCGCCAGCCCGGCACCGAGCGCGTGCTGCCGGCCGATCTGGTCCTCATCTCCGTGGGCTTCCTGCACCCGGA
CACCGAGACCATCCTCGACCAGCTGCCCGTCGAACTTGACAAGCGTGGCAACATCGCCCGCAACGACAAGTTCGCCACCT
CCCAGGACGGCGTGTTCGTGTGCGGCGATGCCGGCCGTGGTCAGAGCCTCGTGGTCTGGGCCATCGCCGAAGGCCGCTCC
TGCGCCGTAGCCGTGGACGAGTACCTCTCCAAGGAAAAGAGCGAGCTGCCGGCCCCGATTAAGGCCAGCCAGCGTCCGAT
GATGCTGCCTCGCTGA

Upstream 100 bases:

>100_bases
ACGAAGGCCATGGAAGAAGCCAAGGCCAACAATGTAGATTTCAATGCGCCCGGCGCCTGGGAAAAGGTGTACGAGCAGGT
TATGGAAGGAGCGCGCTGAC

Downstream 100 bases:

>100_bases
ATACTTTCCAAACAGAAACATGAAAATCCCTTCTTCGTGAGGGGATTTTTGCGTTTCTGGGATTAATTACTGCCTTGAGT
CTTCAGTAATGTCTATATTT

Product: glutamate synthase subunit beta

Products: NA

Alternate protein names: NADPH-GOGAT [H]

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MGDPRGFLKVRTRRELAERPVEERIKDWFDVHAETGLQPWTQTQAARCMDCGTPFCMTGCPLGNLIPEWNDLVRQGKWED
AYNRLSMTNNFPEVTGRICPALCEQACVLGIHQPPTMIKLDEQTIIDQAWDLDYVKPLPPQRLTDQTVAIVGSGPAGLAA
AQQLTRAGHTVVVYEKDDAIGGLMRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITWDDLRDRYDAVVVAIGS
RVPRDMKIPGRELDGIHFALDFLPDATRRIFGVKPVHDITAKDKHVVVIGGGDTGSDCLGTSIRQGAKDVTVLQIMPKEP
SSRPDNSPWPTFARTYQKTSSMEEGGEYIYSTDSVNFEGTEEEKAKVTIDNSTTAEGFVADEHGHVTGLKVVSVAPGENG
PFTRQPGTERVLPADLVLISVGFLHPDTETILDQLPVELDKRGNIARNDKFATSQDGVFVCGDAGRGQSLVVWAIAEGRS
CAVAVDEYLSKEKSELPAPIKASQRPMMLPR

Sequences:

>Translated_511_residues
MGDPRGFLKVRTRRELAERPVEERIKDWFDVHAETGLQPWTQTQAARCMDCGTPFCMTGCPLGNLIPEWNDLVRQGKWED
AYNRLSMTNNFPEVTGRICPALCEQACVLGIHQPPTMIKLDEQTIIDQAWDLDYVKPLPPQRLTDQTVAIVGSGPAGLAA
AQQLTRAGHTVVVYEKDDAIGGLMRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITWDDLRDRYDAVVVAIGS
RVPRDMKIPGRELDGIHFALDFLPDATRRIFGVKPVHDITAKDKHVVVIGGGDTGSDCLGTSIRQGAKDVTVLQIMPKEP
SSRPDNSPWPTFARTYQKTSSMEEGGEYIYSTDSVNFEGTEEEKAKVTIDNSTTAEGFVADEHGHVTGLKVVSVAPGENG
PFTRQPGTERVLPADLVLISVGFLHPDTETILDQLPVELDKRGNIARNDKFATSQDGVFVCGDAGRGQSLVVWAIAEGRS
CAVAVDEYLSKEKSELPAPIKASQRPMMLPR
>Mature_510_residues
GDPRGFLKVRTRRELAERPVEERIKDWFDVHAETGLQPWTQTQAARCMDCGTPFCMTGCPLGNLIPEWNDLVRQGKWEDA
YNRLSMTNNFPEVTGRICPALCEQACVLGIHQPPTMIKLDEQTIIDQAWDLDYVKPLPPQRLTDQTVAIVGSGPAGLAAA
QQLTRAGHTVVVYEKDDAIGGLMRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITWDDLRDRYDAVVVAIGSR
VPRDMKIPGRELDGIHFALDFLPDATRRIFGVKPVHDITAKDKHVVVIGGGDTGSDCLGTSIRQGAKDVTVLQIMPKEPS
SRPDNSPWPTFARTYQKTSSMEEGGEYIYSTDSVNFEGTEEEKAKVTIDNSTTAEGFVADEHGHVTGLKVVSVAPGENGP
FTRQPGTERVLPADLVLISVGFLHPDTETILDQLPVELDKRGNIARNDKFATSQDGVFVCGDAGRGQSLVVWAIAEGRSC
AVAVDEYLSKEKSELPAPIKASQRPMMLPR

Specific function: NITROGEN METABOLISM, GLUTAMATE BIOSYNTHESIS. THE CATALYZED REACTION BRINGS TOGETHER THE NITROGEN AND CARBON METABOLISM. [C]

COG id: COG0493

COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glutamate synthase family [H]

Homologues:

Organism=Homo sapiens, GI119943098, Length=502, Percent_Identity=22.1115537848606, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI111118981, Length=118, Percent_Identity=36.4406779661017, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI111118983, Length=118, Percent_Identity=36.4406779661017, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI1789606, Length=486, Percent_Identity=34.156378600823, Blast_Score=261, Evalue=8e-71,
Organism=Escherichia coli, GI1788811, Length=464, Percent_Identity=35.3448275862069, Blast_Score=250, Evalue=1e-67,
Organism=Escherichia coli, GI87082180, Length=499, Percent_Identity=33.6673346693387, Blast_Score=217, Evalue=1e-57,
Organism=Escherichia coli, GI1788468, Length=450, Percent_Identity=26.8888888888889, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI1789243, Length=450, Percent_Identity=26.4444444444444, Blast_Score=106, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17570289, Length=510, Percent_Identity=41.3725490196078, Blast_Score=374, Evalue=1e-104,
Organism=Caenorhabditis elegans, GI71984108, Length=319, Percent_Identity=26.6457680250784, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17543860, Length=161, Percent_Identity=34.1614906832298, Blast_Score=78, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6320030, Length=521, Percent_Identity=42.4184261036468, Blast_Score=398, Evalue=1e-111,
Organism=Drosophila melanogaster, GI28574881, Length=506, Percent_Identity=46.8379446640316, Blast_Score=436, Evalue=1e-122,
Organism=Drosophila melanogaster, GI24665539, Length=506, Percent_Identity=46.8379446640316, Blast_Score=436, Evalue=1e-122,
Organism=Drosophila melanogaster, GI24665547, Length=506, Percent_Identity=46.8379446640316, Blast_Score=436, Evalue=1e-122,
Organism=Drosophila melanogaster, GI24665543, Length=506, Percent_Identity=46.8379446640316, Blast_Score=436, Evalue=1e-122,
Organism=Drosophila melanogaster, GI24640763, Length=312, Percent_Identity=26.9230769230769, Blast_Score=92, Evalue=7e-19,
Organism=Drosophila melanogaster, GI18858217, Length=312, Percent_Identity=26.9230769230769, Blast_Score=92, Evalue=7e-19,
Organism=Drosophila melanogaster, GI17137178, Length=160, Percent_Identity=30.625, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: 620 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR012285
- InterPro:   IPR006005
- InterPro:   IPR009051
- InterPro:   IPR016040
- InterPro:   IPR001327 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =1.4.1.13 [H]

Molecular weight: Translated: 56384; Mature: 56252

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDPRGFLKVRTRRELAERPVEERIKDWFDVHAETGLQPWTQTQAARCMDCGTPFCMTGC
CCCCCCHHEEHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEECCC
PLGNLIPEWNDLVRQGKWEDAYNRLSMTNNFPEVTGRICPALCEQACVLGIHQPPTMIKL
CCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
DEQTIIDQAWDLDYVKPLPPQRLTDQTVAIVGSGPAGLAAAQQLTRAGHTVVVYEKDDAI
CHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCH
GGLMRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITWDDLRDRYDAVVVAIGS
HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCEEEEEECC
RVPRDMKIPGRELDGIHFALDFLPDATRRIFGVKPVHDITAKDKHVVVIGGGDTGSDCLG
CCCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCCCHHCCCCCCEEEEEECCCCCCHHHH
TSIRQGAKDVTVLQIMPKEPSSRPDNSPWPTFARTYQKTSSMEEGGEYIYSTDSVNFEGT
HHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCEEEECCCCCCCCC
EEEKAKVTIDNSTTAEGFVADEHGHVTGLKVVSVAPGENGPFTRQPGTERVLPADLVLIS
CCCCCEEEECCCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHEEEEE
VGFLHPDTETILDQLPVELDKRGNIARNDKFATSQDGVFVCGDAGRGQSLVVWAIAEGRS
EECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCE
CAVAVDEYLSKEKSELPAPIKASQRPMMLPR
EEEEHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GDPRGFLKVRTRRELAERPVEERIKDWFDVHAETGLQPWTQTQAARCMDCGTPFCMTGC
CCCCCHHEEHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEECCC
PLGNLIPEWNDLVRQGKWEDAYNRLSMTNNFPEVTGRICPALCEQACVLGIHQPPTMIKL
CCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
DEQTIIDQAWDLDYVKPLPPQRLTDQTVAIVGSGPAGLAAAQQLTRAGHTVVVYEKDDAI
CHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCH
GGLMRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITWDDLRDRYDAVVVAIGS
HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCEEEEEECC
RVPRDMKIPGRELDGIHFALDFLPDATRRIFGVKPVHDITAKDKHVVVIGGGDTGSDCLG
CCCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCCCHHCCCCCCEEEEEECCCCCCHHHH
TSIRQGAKDVTVLQIMPKEPSSRPDNSPWPTFARTYQKTSSMEEGGEYIYSTDSVNFEGT
HHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCEEEECCCCCCCCC
EEEKAKVTIDNSTTAEGFVADEHGHVTGLKVVSVAPGENGPFTRQPGTERVLPADLVLIS
CCCCCEEEECCCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHEEEEE
VGFLHPDTETILDQLPVELDKRGNIARNDKFATSQDGVFVCGDAGRGQSLVVWAIAEGRS
EECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCE
CAVAVDEYLSKEKSELPAPIKASQRPMMLPR
EEEEHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 11029411 [H]