| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692352
Identifier: 213692352
GI number: 213692352
Start: 1641484
End: 1643379
Strand: Reverse
Name: 213692352
Synonym: Blon_1479
Alternate gene names: NA
Gene position: 1643379-1641484 (Counterclockwise)
Preceding gene: 213692353
Following gene: 213692351
Centisome position: 58.01
GC content: 58.02
Gene sequence:
>1896_bases ATGGAATTCACCGTATCCGGCACTACCGTGCGATTCGATGAACGAACAATGCAGTTCGCTTTTACGCGCGACGGTGCCGA ATGGAATACCTGCGCTGATTTCAAGCCGACCCTGCAATGCGCGCAAGGCACCTTCGCGTTCGCGGATGCCACTTCCATCA CCCATGAGCAGCGTGAAACCGGCACGGGAACCGGCATTCGCAGCATCTTCACCGGCTTTGGGCACAGCGCATACTCCTTT GAAACCTATGTATGGGTGGAGCGTGCCTCAGGCGATGTGCTCTTCGAATGGATTCCGCTCAATGAGCAAGGCCTGAACAT CACCAATGTGACGTGGCCCGCAGCCATGGACTTCGATTGCGCCGACGACCATGACACGACGCTCATCACCCATGAGCAAG GTGTGATGATCCCCAACACATGGCCTACCGCCGTGAGCACCAAAGACATCGCCTTCGACGGTCGCTTCGAAACGGCTGGC GGTTACATGCCGTGGTTCGCGCAGCTCCGCGCAGACGGACACGGGTATATCGCCATCTGCGAAACTCCATGGAATGCCGG TTACGGCATCGACCATCCCAGCGATGGCCCGTACACCCATATCAATACTTGGTTTGAGCCAAGCCTCGGCACAATGAATT ATCGCCGCGTGGTACGCTACCAGTTCCTCGACCACGCCGATCACACGGCGGTGTGCAAGGCCTATCGTTCGTACGTCAAT GAACGAGGTCGCTTGCGTACGCTCGCCGAAAAGGCGGCGCGCAATCCCTCCGTGCGTGACCTGATTGGTCGTTCATGGGT GCACATCGGCATCAAAACCAAAGTACAGCCCGACTCGTACTACTACGATAAGGATCACCCCGAGAAAAACGATTCATTGG TCACCTTTGCGCAGCGCGAAAAGCAAATGCGAACATTGCACAGCATGGGTGCAGGCCGACTGTACATGCACTTGGATGGT TGGGCACAGCCCGGATACGACAACGCACACCCTGACTATCTGCCGGCTTGTCAGGAGGCAGGCGGCTGGGAAGGCATGAA GTCGCTGGTCGACGCCTGCCATGAGCAAGGCGATATTTTCGGCACGCATGACCAGTACCGCGATTACTACTTCACCGCGC AAACCTTTGATGCCAACAATGCGATTCGGCTGGCAGACGGTACGATGCCCGAACACGCACGCTGGGCGGGCGGCCACCAG ACCTACCTGTGCGCCGAGCTCGCACCGGACTACGTGCGCCGCAATTTCGCCGAAATCGCCGCACACGGCATCAAGCTCGA CTGTGCATACTTGGATGTTTTCACCTGCAACGAAGGCGACGAATGCTCGAACCCCGAACACCGCATGACCCGCCGCGAAT GCTTTGACCGCCGCGCCGAATGCTTCGAATATCTGCTCTCGCACGGCATCCTCTCCTCGTCCGAAGAGGTATCGGACTGG GCAGTGCCAAGCCTGATATTCTGCCATTACGCGCCATACGACTTCCAGATGCGCTCACCCAACGAGCCGCGCCAAGGTGT GCCGGTGCCGCTGTATAACCTCGTCTACCATGATTGCATTATCGAACCATGGATGATGGAGCGTGTGGCGAACGGCGACG ATTACATGCTGTACGCCCTGCTCAACGGCGGAGCTCCATACCTGATTCGCGATGCCGCATACATCGGCGTTGACGGCGAC ATGGACGACGAACAGCGCGCTCGCACGGAAAACGACATCGAACGCTGCCATACGGTCGCTGCATTCCATGAGCGGGTCGG CATGCAGGAACTGGTTCGTCACGAGTTCGTGGATGATGATCCGCTGGTGCAGCGTTCGGTATTCGCGGACGGCACTGCGG TCACTTGCGACTTCCATACGCAAACTTATCGCATCACCGACTGCCCGCATCACTGA
Upstream 100 bases:
>100_bases GACTGGGGGTGGTCTCAAACAGCAGACCACCCCTAATCTTGTTATATGAGCGAGCTCCCGTAAGCGGGAGCAATCGAGAA CATACAGGAGCACATTAACT
Downstream 100 bases:
>100_bases CTGAAAATACAATGACACACAGTGGGTTCCGATGGACTGGTGGCAAATTGCCGCCGATAAGCGAGTAATATAGCCAACAG TGTCACCGTCGAAACAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 631; Mature: 631
Protein sequence:
>631_residues MEFTVSGTTVRFDERTMQFAFTRDGAEWNTCADFKPTLQCAQGTFAFADATSITHEQRETGTGTGIRSIFTGFGHSAYSF ETYVWVERASGDVLFEWIPLNEQGLNITNVTWPAAMDFDCADDHDTTLITHEQGVMIPNTWPTAVSTKDIAFDGRFETAG GYMPWFAQLRADGHGYIAICETPWNAGYGIDHPSDGPYTHINTWFEPSLGTMNYRRVVRYQFLDHADHTAVCKAYRSYVN ERGRLRTLAEKAARNPSVRDLIGRSWVHIGIKTKVQPDSYYYDKDHPEKNDSLVTFAQREKQMRTLHSMGAGRLYMHLDG WAQPGYDNAHPDYLPACQEAGGWEGMKSLVDACHEQGDIFGTHDQYRDYYFTAQTFDANNAIRLADGTMPEHARWAGGHQ TYLCAELAPDYVRRNFAEIAAHGIKLDCAYLDVFTCNEGDECSNPEHRMTRRECFDRRAECFEYLLSHGILSSSEEVSDW AVPSLIFCHYAPYDFQMRSPNEPRQGVPVPLYNLVYHDCIIEPWMMERVANGDDYMLYALLNGGAPYLIRDAAYIGVDGD MDDEQRARTENDIERCHTVAAFHERVGMQELVRHEFVDDDPLVQRSVFADGTAVTCDFHTQTYRITDCPHH
Sequences:
>Translated_631_residues MEFTVSGTTVRFDERTMQFAFTRDGAEWNTCADFKPTLQCAQGTFAFADATSITHEQRETGTGTGIRSIFTGFGHSAYSF ETYVWVERASGDVLFEWIPLNEQGLNITNVTWPAAMDFDCADDHDTTLITHEQGVMIPNTWPTAVSTKDIAFDGRFETAG GYMPWFAQLRADGHGYIAICETPWNAGYGIDHPSDGPYTHINTWFEPSLGTMNYRRVVRYQFLDHADHTAVCKAYRSYVN ERGRLRTLAEKAARNPSVRDLIGRSWVHIGIKTKVQPDSYYYDKDHPEKNDSLVTFAQREKQMRTLHSMGAGRLYMHLDG WAQPGYDNAHPDYLPACQEAGGWEGMKSLVDACHEQGDIFGTHDQYRDYYFTAQTFDANNAIRLADGTMPEHARWAGGHQ TYLCAELAPDYVRRNFAEIAAHGIKLDCAYLDVFTCNEGDECSNPEHRMTRRECFDRRAECFEYLLSHGILSSSEEVSDW AVPSLIFCHYAPYDFQMRSPNEPRQGVPVPLYNLVYHDCIIEPWMMERVANGDDYMLYALLNGGAPYLIRDAAYIGVDGD MDDEQRARTENDIERCHTVAAFHERVGMQELVRHEFVDDDPLVQRSVFADGTAVTCDFHTQTYRITDCPHH >Mature_631_residues MEFTVSGTTVRFDERTMQFAFTRDGAEWNTCADFKPTLQCAQGTFAFADATSITHEQRETGTGTGIRSIFTGFGHSAYSF ETYVWVERASGDVLFEWIPLNEQGLNITNVTWPAAMDFDCADDHDTTLITHEQGVMIPNTWPTAVSTKDIAFDGRFETAG GYMPWFAQLRADGHGYIAICETPWNAGYGIDHPSDGPYTHINTWFEPSLGTMNYRRVVRYQFLDHADHTAVCKAYRSYVN ERGRLRTLAEKAARNPSVRDLIGRSWVHIGIKTKVQPDSYYYDKDHPEKNDSLVTFAQREKQMRTLHSMGAGRLYMHLDG WAQPGYDNAHPDYLPACQEAGGWEGMKSLVDACHEQGDIFGTHDQYRDYYFTAQTFDANNAIRLADGTMPEHARWAGGHQ TYLCAELAPDYVRRNFAEIAAHGIKLDCAYLDVFTCNEGDECSNPEHRMTRRECFDRRAECFEYLLSHGILSSSEEVSDW AVPSLIFCHYAPYDFQMRSPNEPRQGVPVPLYNLVYHDCIIEPWMMERVANGDDYMLYALLNGGAPYLIRDAAYIGVDGD MDDEQRARTENDIERCHTVAAFHERVGMQELVRHEFVDDDPLVQRSVFADGTAVTCDFHTQTYRITDCPHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71891; Mature: 71891
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFTVSGTTVRFDERTMQFAFTRDGAEWNTCADFKPTLQCAQGTFAFADATSITHEQRET CEEEECCCEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHCCCCEEEECCHHHHHHHHHC GTGTGIRSIFTGFGHSAYSFETYVWVERASGDVLFEWIPLNEQGLNITNVTWPAAMDFDC CCCCHHHHHHHHCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCCCC ADDHDTTLITHEQGVMIPNTWPTAVSTKDIAFDGRFETAGGYMPWFAQLRADGHGYIAIC CCCCCCEEEEECCCEECCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEE ETPWNAGYGIDHPSDGPYTHINTWFEPSLGTMNYRRVVRYQFLDHADHTAVCKAYRSYVN ECCCCCCCCCCCCCCCCEEEEECEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH ERGRLRTLAEKAARNPSVRDLIGRSWVHIGIKTKVQPDSYYYDKDHPEKNDSLVTFAQRE CCCHHHHHHHHHHCCCCHHHHHCCCEEEEEEEEEECCCCEECCCCCCCCCCCEEEHHHHH KQMRTLHSMGAGRLYMHLDGWAQPGYDNAHPDYLPACQEAGGWEGMKSLVDACHEQGDIF HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCEE GTHDQYRDYYFTAQTFDANNAIRLADGTMPEHARWAGGHQTYLCAELAPDYVRRNFAEIA CCCHHCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEHHCCHHHHHHHHHHHH AHGIKLDCAYLDVFTCNEGDECSNPEHRMTRRECFDRRAECFEYLLSHGILSSSEEVSDW HCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH AVPSLIFCHYAPYDFQMRSPNEPRQGVPVPLYNLVYHDCIIEPWMMERVANGDDYMLYAL CCCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCEEEEEE LNGGAPYLIRDAAYIGVDGDMDDEQRARTENDIERCHTVAAFHERVGMQELVRHEFVDDD ECCCCCEEEECEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC PLVQRSVFADGTAVTCDFHTQTYRITDCPHH CHHHHHHCCCCCEEEEEECCCEEEECCCCCC >Mature Secondary Structure MEFTVSGTTVRFDERTMQFAFTRDGAEWNTCADFKPTLQCAQGTFAFADATSITHEQRET CEEEECCCEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHCCCCEEEECCHHHHHHHHHC GTGTGIRSIFTGFGHSAYSFETYVWVERASGDVLFEWIPLNEQGLNITNVTWPAAMDFDC CCCCHHHHHHHHCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCCCC ADDHDTTLITHEQGVMIPNTWPTAVSTKDIAFDGRFETAGGYMPWFAQLRADGHGYIAIC CCCCCCEEEEECCCEECCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEE ETPWNAGYGIDHPSDGPYTHINTWFEPSLGTMNYRRVVRYQFLDHADHTAVCKAYRSYVN ECCCCCCCCCCCCCCCCEEEEECEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH ERGRLRTLAEKAARNPSVRDLIGRSWVHIGIKTKVQPDSYYYDKDHPEKNDSLVTFAQRE CCCHHHHHHHHHHCCCCHHHHHCCCEEEEEEEEEECCCCEECCCCCCCCCCCEEEHHHHH KQMRTLHSMGAGRLYMHLDGWAQPGYDNAHPDYLPACQEAGGWEGMKSLVDACHEQGDIF HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCEE GTHDQYRDYYFTAQTFDANNAIRLADGTMPEHARWAGGHQTYLCAELAPDYVRRNFAEIA CCCHHCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEHHCCHHHHHHHHHHHH AHGIKLDCAYLDVFTCNEGDECSNPEHRMTRRECFDRRAECFEYLLSHGILSSSEEVSDW HCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH AVPSLIFCHYAPYDFQMRSPNEPRQGVPVPLYNLVYHDCIIEPWMMERVANGDDYMLYAL CCCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCEEEEEE LNGGAPYLIRDAAYIGVDGDMDDEQRARTENDIERCHTVAAFHERVGMQELVRHEFVDDD ECCCCCEEEECEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC PLVQRSVFADGTAVTCDFHTQTYRITDCPHH CHHHHHHCCCCCEEEEEECCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA