| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is metE [H]
Identifier: 213692330
GI number: 213692330
Start: 1616025
End: 1618328
Strand: Reverse
Name: metE [H]
Synonym: Blon_1455
Alternate gene names: 213692330
Gene position: 1618328-1616025 (Counterclockwise)
Preceding gene: 213692331
Following gene: 213692329
Centisome position: 57.13
GC content: 62.28
Gene sequence:
>2304_bases ATGTCCACTCTGACTTCCGTCTCCGGCTTCCCCCGCATCGGGCAGAACCGTGAACTGAAGAAGATCATCGAAGGTTACTG GAAGGGTGCCAACGACCTTGCCGCCGTCAAGGCCACCGCCGCCGAACTGCGCGCCAAGCATTGGAGGCTGCAGCAGGCCG CTGGCATCGATCTCATCGCCAGCAACGACTTCAGCTACTACGATCAGATGCTGGACACCGCCATCCTGCTCAACGTGATT CCGCAGCGTTACCAGCGTCTCGCCTTCGACGATCAGGAGGATACGCTCTTCGCCATGGCGCGCGGCTACCAGGGCGACAA GGGTGATGTAACCGCACTGCCGATGAAGAAGTGGTTCACCACCAACTACCACTATCTGGTGCCCGAGGTTGAACCGTCCG CCGAAATCAAGCTCAATTCCACCAAACCGTTCGATGAATTCAACGAGGCCAAGTCCTTGGGCGTCGAAACCAAGCCCGTG TTCATCGGACCGTACACCTTCCTCAAGCTCGCGCGTACTCCGGAAGCCGCCGAACTGGAGATCGACAAAGGACTGGTCAA CGCGGTGGCCGCCGTCTACGCCGAGGTGCTCGCCAGGTTCAACGATCTTGGCGCCGCGTGGGTTCAGCTTGACGAGCCGT ACCTCGTGCTCGACAAGGAGCCGGGCGATGTCGAGCTCTTCAAGGCCCTCTACACCAAGATCCTGCCCGCCAAGGGCAAT GTGAAGGTGCTGCTCAACACCTACTTCGGCCACATCGCCGACGTGTATGAGACCGTCAACCTGTTCGGTTTCGACGGCAT CGGGCTGGATCTCAACGAAGGTCGCGAGGAGAACCTCGAAGCCGTCGCCAAGTACGGCGTGGCCGCCGGCACCACCATCT TCGCCGGCGTGATTAACGGCCGCAACATCTGGCGCAACAACTACGCCACCTCCCTCGGCTTGGTCGATGCTCTGAAGCAG GTCACCGCCGATGTGGCCGTCTCCACCGCGTCCTCCTTGCTGCATGTGCCGTTCAGCACCGAAGGGGAGACCGGCATCCC GGCCGAAGACCTCAAGCACTTCGCATTCGCGGTCCAAAAGCTCGGCGAGCTCAAGGAGATCGCGGCCCTGACCGACGCCA CCGAGGATGAGAAGAAGTCGTCCGCGGCCCTCGCCGCCAATCAGGCGTTGTTCGACGGCACCCGAGTGGCCGCCGATCCG GCCGTCGCCGAACGCATCGGCAAGCTGTCCGATGCCGACTACGTGCGTCAGCCGGCCCGCGAAGAGCGCCAGTCCCTGCA GCGCGAGGCCCTCGGGCTGCCGCTGCTGCCGACCACCACCATCGGCTCCTTCCCCCAGACCAAGGAGATTCGCGCCGAGC GCGCCAAGCTGCGCAAGGGCGAAGTCACCAAGGAGGCCTATGACGAGTTCATCGCATCGCAGATCGACGCCGTCATCCGC AAACAGGAGGAGATCGGCCTCGATGTGCTGGTCCATGGCGAATTCGAGCGTAACGACATGGTCGAGTACTTCGGCCAGAA TCTCAACGGCTTCCTGTTCACCAAGAACGCCTGGGTCCAGTCCTATGGCACTCGTTGCGTCAAGCCCCCGATCGTGTGGG GCGATGTCTCCCGCGCCAACCCGATCACCGTGGAATGGTCCGCGTACGCCCAGTCCAAGACCGACCATGTGATGAAGGGC ATGCTCACCGGACCGGTGACCATCCTCAACTGGTCCTGGCCGCGTGAGGACATCACCCATGAGGAACAGACCAAGCAGCT CGCTCTCGCCATCCGCGACGAAGTCCTCGATCTTGAGGCCGCCGGCATCAAGATCATCCAGATCGATGAGGCCGCCCTGC GCGAGAAGCTGCCGCTGCGCAAGTCCGACTGGCACGCCAAGTATCTCGACTGGGCCATCCCGGCCTTCCGTCTGGTGCAT TCCGCCGTCAAGCCGACCACCCAGATCCACACGCACATGTGCTATTCCGAGTTCAACGACATCATCCGCGACATCGATGC GATGGATGCCGACGTGATCTCCTTCGAGGCGTCCCGCGGCGATCTCGTGGTGCTTGACGCCATCCACGACGCGCGGTTCG AGACCGAAGCCGGTCCGGGCGTGTACGACATCCATTCCCCGCGCATCCCCTCCGAGAAGGAGATCGAGGATCGCATCTAC GAGATCCTGGACAAGATCGACGTAAAGAAGGTGTGGATCAACCCCGACTGCGGTCTGAAGACCCGAGGCAACGACGAGAC CTGGCCGAGCCTTGAACATCTGGTCGCCGCCGCCAAGGCCGTGCGCGCCAGGCTCGACAAGTAG
Upstream 100 bases:
>100_bases ATTCCGTTGATAGCGACACTCTGCGGCTATTTATAGGGGCCGGAATCCGAATGTTTGCTACCCTGAATCGGGTTACGAAC GCACACAATTTGGAGGATTC
Downstream 100 bases:
>100_bases CGGAAATCACCGAGCTCCCTTCCGGATGAGGGAGCTCGGGTTTATGTAAGGAAATCAGCATGCATTCCCCGATGTTCAGC CTTGAGGTCTTTCCCCCGAA
Product: 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
Products: NA
Alternate protein names: Cobalamin-independent methionine synthase; Methionine synthase, vitamin-B12 independent isozyme [H]
Number of amino acids: Translated: 767; Mature: 766
Protein sequence:
>767_residues MSTLTSVSGFPRIGQNRELKKIIEGYWKGANDLAAVKATAAELRAKHWRLQQAAGIDLIASNDFSYYDQMLDTAILLNVI PQRYQRLAFDDQEDTLFAMARGYQGDKGDVTALPMKKWFTTNYHYLVPEVEPSAEIKLNSTKPFDEFNEAKSLGVETKPV FIGPYTFLKLARTPEAAELEIDKGLVNAVAAVYAEVLARFNDLGAAWVQLDEPYLVLDKEPGDVELFKALYTKILPAKGN VKVLLNTYFGHIADVYETVNLFGFDGIGLDLNEGREENLEAVAKYGVAAGTTIFAGVINGRNIWRNNYATSLGLVDALKQ VTADVAVSTASSLLHVPFSTEGETGIPAEDLKHFAFAVQKLGELKEIAALTDATEDEKKSSAALAANQALFDGTRVAADP AVAERIGKLSDADYVRQPAREERQSLQREALGLPLLPTTTIGSFPQTKEIRAERAKLRKGEVTKEAYDEFIASQIDAVIR KQEEIGLDVLVHGEFERNDMVEYFGQNLNGFLFTKNAWVQSYGTRCVKPPIVWGDVSRANPITVEWSAYAQSKTDHVMKG MLTGPVTILNWSWPREDITHEEQTKQLALAIRDEVLDLEAAGIKIIQIDEAALREKLPLRKSDWHAKYLDWAIPAFRLVH SAVKPTTQIHTHMCYSEFNDIIRDIDAMDADVISFEASRGDLVVLDAIHDARFETEAGPGVYDIHSPRIPSEKEIEDRIY EILDKIDVKKVWINPDCGLKTRGNDETWPSLEHLVAAAKAVRARLDK
Sequences:
>Translated_767_residues MSTLTSVSGFPRIGQNRELKKIIEGYWKGANDLAAVKATAAELRAKHWRLQQAAGIDLIASNDFSYYDQMLDTAILLNVI PQRYQRLAFDDQEDTLFAMARGYQGDKGDVTALPMKKWFTTNYHYLVPEVEPSAEIKLNSTKPFDEFNEAKSLGVETKPV FIGPYTFLKLARTPEAAELEIDKGLVNAVAAVYAEVLARFNDLGAAWVQLDEPYLVLDKEPGDVELFKALYTKILPAKGN VKVLLNTYFGHIADVYETVNLFGFDGIGLDLNEGREENLEAVAKYGVAAGTTIFAGVINGRNIWRNNYATSLGLVDALKQ VTADVAVSTASSLLHVPFSTEGETGIPAEDLKHFAFAVQKLGELKEIAALTDATEDEKKSSAALAANQALFDGTRVAADP AVAERIGKLSDADYVRQPAREERQSLQREALGLPLLPTTTIGSFPQTKEIRAERAKLRKGEVTKEAYDEFIASQIDAVIR KQEEIGLDVLVHGEFERNDMVEYFGQNLNGFLFTKNAWVQSYGTRCVKPPIVWGDVSRANPITVEWSAYAQSKTDHVMKG MLTGPVTILNWSWPREDITHEEQTKQLALAIRDEVLDLEAAGIKIIQIDEAALREKLPLRKSDWHAKYLDWAIPAFRLVH SAVKPTTQIHTHMCYSEFNDIIRDIDAMDADVISFEASRGDLVVLDAIHDARFETEAGPGVYDIHSPRIPSEKEIEDRIY EILDKIDVKKVWINPDCGLKTRGNDETWPSLEHLVAAAKAVRARLDK >Mature_766_residues STLTSVSGFPRIGQNRELKKIIEGYWKGANDLAAVKATAAELRAKHWRLQQAAGIDLIASNDFSYYDQMLDTAILLNVIP QRYQRLAFDDQEDTLFAMARGYQGDKGDVTALPMKKWFTTNYHYLVPEVEPSAEIKLNSTKPFDEFNEAKSLGVETKPVF IGPYTFLKLARTPEAAELEIDKGLVNAVAAVYAEVLARFNDLGAAWVQLDEPYLVLDKEPGDVELFKALYTKILPAKGNV KVLLNTYFGHIADVYETVNLFGFDGIGLDLNEGREENLEAVAKYGVAAGTTIFAGVINGRNIWRNNYATSLGLVDALKQV TADVAVSTASSLLHVPFSTEGETGIPAEDLKHFAFAVQKLGELKEIAALTDATEDEKKSSAALAANQALFDGTRVAADPA VAERIGKLSDADYVRQPAREERQSLQREALGLPLLPTTTIGSFPQTKEIRAERAKLRKGEVTKEAYDEFIASQIDAVIRK QEEIGLDVLVHGEFERNDMVEYFGQNLNGFLFTKNAWVQSYGTRCVKPPIVWGDVSRANPITVEWSAYAQSKTDHVMKGM LTGPVTILNWSWPREDITHEEQTKQLALAIRDEVLDLEAAGIKIIQIDEAALREKLPLRKSDWHAKYLDWAIPAFRLVHS AVKPTTQIHTHMCYSEFNDIIRDIDAMDADVISFEASRGDLVVLDAIHDARFETEAGPGVYDIHSPRIPSEKEIEDRIYE ILDKIDVKKVWINPDCGLKTRGNDETWPSLEHLVAAAKAVRARLDK
Specific function: Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation [H]
COG id: COG0620
COG function: function code E; Methionine synthase II (cobalamin-independent)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the vitamin-B12 independent methionine synthase family [H]
Homologues:
Organism=Escherichia coli, GI2367304, Length=767, Percent_Identity=46.9361147327249, Blast_Score=654, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6320936, Length=772, Percent_Identity=45.8549222797927, Blast_Score=644, Evalue=0.0,
Paralogues:
None
Copy number: 45,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013215 - InterPro: IPR006276 - InterPro: IPR002629 [H]
Pfam domain/function: PF08267 Meth_synt_1; PF01717 Meth_synt_2 [H]
EC number: =2.1.1.14 [H]
Molecular weight: Translated: 85445; Mature: 85313
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLTSVSGFPRIGQNRELKKIIEGYWKGANDLAAVKATAAELRAKHWRLQQAAGIDLIA CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEE SNDFSYYDQMLDTAILLNVIPQRYQRLAFDDQEDTLFAMARGYQGDKGDVTALPMKKWFT CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEECHHHHHC TNYHYLVPEVEPSAEIKLNSTKPFDEFNEAKSLGVETKPVFIGPYTFLKLARTPEAAELE CCCEEEECCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEECCHHHHHHHCCCCCCEEE IDKGLVNAVAAVYAEVLARFNDLGAAWVQLDEPYLVLDKEPGDVELFKALYTKILPAKGN HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCC VKVLLNTYFGHIADVYETVNLFGFDGIGLDLNEGREENLEAVAKYGVAAGTTIFAGVING EEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHEEEECCC RNIWRNNYATSLGLVDALKQVTADVAVSTASSLLHVPFSTEGETGIPAEDLKHFAFAVQK CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHH LGELKEIAALTDATEDEKKSSAALAANQALFDGTRVAADPAVAERIGKLSDADYVRQPAR HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHCCHH EERQSLQREALGLPLLPTTTIGSFPQTKEIRAERAKLRKGEVTKEAYDEFIASQIDAVIR HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH KQEEIGLDVLVHGEFERNDMVEYFGQNLNGFLFTKNAWVQSYGTRCVKPPIVWGDVSRAN HHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCEEECCCCCCC PITVEWSAYAQSKTDHVMKGMLTGPVTILNWSWPREDITHEEQTKQLALAIRDEVLDLEA CEEEEEHHHHCCHHHHHHHHHHCCCEEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHH AGIKIIQIDEAALREKLPLRKSDWHAKYLDWAIPAFRLVHSAVKPTTQIHTHMCYSEFND CCEEEEEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH IIRDIDAMDADVISFEASRGDLVVLDAIHDARFETEAGPGVYDIHSPRIPSEKEIEDRIY HHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHH EILDKIDVKKVWINPDCGLKTRGNDETWPSLEHLVAAAKAVRARLDK HHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STLTSVSGFPRIGQNRELKKIIEGYWKGANDLAAVKATAAELRAKHWRLQQAAGIDLIA CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEE SNDFSYYDQMLDTAILLNVIPQRYQRLAFDDQEDTLFAMARGYQGDKGDVTALPMKKWFT CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEECHHHHHC TNYHYLVPEVEPSAEIKLNSTKPFDEFNEAKSLGVETKPVFIGPYTFLKLARTPEAAELE CCCEEEECCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEECCHHHHHHHCCCCCCEEE IDKGLVNAVAAVYAEVLARFNDLGAAWVQLDEPYLVLDKEPGDVELFKALYTKILPAKGN HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCC VKVLLNTYFGHIADVYETVNLFGFDGIGLDLNEGREENLEAVAKYGVAAGTTIFAGVING EEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHEEEECCC RNIWRNNYATSLGLVDALKQVTADVAVSTASSLLHVPFSTEGETGIPAEDLKHFAFAVQK CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHH LGELKEIAALTDATEDEKKSSAALAANQALFDGTRVAADPAVAERIGKLSDADYVRQPAR HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHCCHH EERQSLQREALGLPLLPTTTIGSFPQTKEIRAERAKLRKGEVTKEAYDEFIASQIDAVIR HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH KQEEIGLDVLVHGEFERNDMVEYFGQNLNGFLFTKNAWVQSYGTRCVKPPIVWGDVSRAN HHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCEEECCCCCCC PITVEWSAYAQSKTDHVMKGMLTGPVTILNWSWPREDITHEEQTKQLALAIRDEVLDLEA CEEEEEHHHHCCHHHHHHHHHHCCCEEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHH AGIKIIQIDEAALREKLPLRKSDWHAKYLDWAIPAFRLVHSAVKPTTQIHTHMCYSEFND CCEEEEEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH IIRDIDAMDADVISFEASRGDLVVLDAIHDARFETEAGPGVYDIHSPRIPSEKEIEDRIY HHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHH EILDKIDVKKVWINPDCGLKTRGNDETWPSLEHLVAAAKAVRARLDK HHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA