Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692229

Identifier: 213692229

GI number: 213692229

Start: 1520006

End: 1522120

Strand: Direct

Name: 213692229

Synonym: Blon_1349

Alternate gene names: NA

Gene position: 1520006-1522120 (Clockwise)

Preceding gene: 213692227

Following gene: 213692230

Centisome position: 53.66

GC content: 65.48

Gene sequence:

>2115_bases
ATGACGACGACCGCAGACAGACGCGAGAAAGGCTCGGGCGGAATCACCAGACTCGCCAACGGGAAATACAGGGCCTTCGT
CGAAACGACCCCCGACCCCGGCGACGGGTCGAGACGACGCGTGAGCGCCACGGGCCGGACCAAAAGCGAGGCGCTGCGCA
AGGCCAGGGACAAGGCCCTGCGACCGGACATGGGCATGACCCCCGGCGGGAACGCCACCGTCGCCGAATGGATGGACCAC
TGGGTGGACGAGGTCATCGAACCCCGACGCGCCCCGAACACCACGAAAAGCTACCGCACCCGCATCCGCATGGACATCAC
GCCCGTCATCGGCGCCGTCCCGCTCGACCGGCTGCGCCCCAGCCACGTCCGCATGGTCGAGAACCGCATCCTGCGCGGCG
ACGGACGCACCGGGACCGACCCCCGTTCGGCCGCGACCGCACGCCTGACCCACAGCATCCTCAAAACCGCCCTGGGCGAC
GCCATGGCCGAAGGGCTCATCGACCGGAACCCCGCCGCCCTCACCGAAGTCCCGGAAACCGAACCCGTCGAAATCGCCAT
CCTCACCACCGGACAGGCGGCACGGCTCATCGCTCTGGAACCCGACACGAAATGGCGGCTCATCTGGCGGCTCCTGTTCA
TCACCGGCATGAGACTCGGCGAAACGCTCGGCATCACCCGACAGGAACTCATCCGATCGGACGGACTGCCCTGCCTGCTC
GTCGAATGGCAGCTCAAGGAATTCGAGAAGGACACCGTCATCCCCGCCGGATACCGGGCCAGACACCTCGGAGGCCGCAT
GTGGCTCACCCGCCCCAAGACCCGCAAAGGCCAACGGCTCATCCCCCTGCCCGCCGACCTTGCCGCCGACCTCGAATCAT
ACATGGACTCGGCCGGCATCCCCGACGACCAGCCGGTCTTCCGATCCGGACGCGGCAACCCGATCTGCAAGGACACGCTG
CACCACGCATGGCGCCGGGCCCTGGACCGGGCCGGTCTGCCGCACGTAATCCGAATCCATCTCCGCCGCCACGCAACGCA
CGTCCTCGATCCGGCACGCCTCCAACGTGGCGCCGCTGCCGGCGAACGGCTCCAACACGAGCCCGTCCGGCGGCGTGACC
AGACGCACCAGCCAGCGCATCAGTTCCAACGGTTTCACCGTCGGATGGAGGATCCCGTCCACGGTCAGCCTCTCCCCCGG
TCCCGCCTTCGGACAATACCGGAACACGGGATAGAAGCGGGATGCGCCGCCGGCATCATCGTATTCCGCACCCGTATGGG
TCATGCTCCAGCCGTCACCGGGTTTCGTGCTTGCGCGTGGTTTGCCTTTTCGACTGACGGTGACGCCGGACTGTCGGTCG
AGTTCCTTGGCCGTGGATTGGTCGAACAGCATGTTCGGCGTGAAACGGGCTTCGGCCGTGTAGTCGGTGCGATCCGCTTT
GTCCGCGCCGTAGATGTGGTTGTCGCGCGGGCCGGAGTTGAAGTCGGCATGCCGGTTCTTGTTCTTCGACTCCTTCTCAT
CTGCCGTGTTGCGGAATGGGATGCGGCATGCGTCGATATGCAGTGCGCCCGTCCCGTGTCCGAGCAGATTGTGGTCGAGT
GTCCCGTCCAACGGCTTGCGTGCGAGGCAGATGGGTTCGTGCGCGGGCTTCAGCTGGCTGTACCAGCCGGACCATTGTTC
GCCCTGTTCGGTGGCGAGCGCATCCCATTCGGATTTCGTCTTGCCGCCGTTCGCGGTGCTGGAACCTCCGAAGCCGTTGG
TGTCCGAATATCCTGCGCCAGCATGACCTTTACCGGCCACATGGGTGCGTTCCGCACCCAATTCCCTGTCCACGAGCAGT
CTCGCATCCGAACCGTGTGGCATGCCGCTTGCGTACACCCAGTCGATCTGGTCGCGGATTTCGAAGCCCGCGTCCTCGAT
CGCGCAGGCGAGCCGATGATATGTGCGGCTGGCGGCAAACGCGGCCACGTGCCCTCCCGGCTTCAGGACGCGCAGAATGT
CCTTCCACAGGATTACGTCGAATGCGATGCCCGTCGAATCGAAGCCCAGGTTCATGAAACCGATCTCGTACGGCGGGTCG
GTGACCGGTTTGGCGGCGCAAGCCCCGTCTTTTAA

Upstream 100 bases:

>100_bases
TTTCGGCTGAAATAGGCACACGATTGGCACCTATCCCGGTCGGAAACGCATACCGGGGCCCGAAGGAACGGGAACACCGA
AGGACCCATGGAAAGGTGAC

Downstream 100 bases:

>100_bases
GGCTGGGGTGAGCCGCCACTTCTTTGATTAATCACTGTTTCCGTGGCAAGGTTTATAGCATGAGCCAGAAGGTACGAATC
ATCAAAGTCAGGCATGCGGG

Product: phage integrase family protein

Products: NA

Alternate protein names: Phage Integrase; Integrase; Phage Integrase Family Protein; Phage-Related Integrase; DNA Integration/Recombination/Invertion Protein; Site-Specific Recombinase Phage Integrase Family; Integrase/Recombinase; Phage Integrase Family Site Specific Recombinase; Site-Specific Integrase; Prophage; Tyrosine Recombinase XerC-Like Protein

Number of amino acids: Translated: 704; Mature: 703

Protein sequence:

>704_residues
MTTTADRREKGSGGITRLANGKYRAFVETTPDPGDGSRRRVSATGRTKSEALRKARDKALRPDMGMTPGGNATVAEWMDH
WVDEVIEPRRAPNTTKSYRTRIRMDITPVIGAVPLDRLRPSHVRMVENRILRGDGRTGTDPRSAATARLTHSILKTALGD
AMAEGLIDRNPAALTEVPETEPVEIAILTTGQAARLIALEPDTKWRLIWRLLFITGMRLGETLGITRQELIRSDGLPCLL
VEWQLKEFEKDTVIPAGYRARHLGGRMWLTRPKTRKGQRLIPLPADLAADLESYMDSAGIPDDQPVFRSGRGNPICKDTL
HHAWRRALDRAGLPHVIRIHLRRHATHVLDPARLQRGAAAGERLQHEPVRRRDQTHQPAHQFQRFHRRMEDPVHGQPLPR
SRLRTIPEHGIEAGCAAGIIVFRTRMGHAPAVTGFRACAWFAFSTDGDAGLSVEFLGRGLVEQHVRRETGFGRVVGAIRF
VRAVDVVVARAGVEVGMPVLVLRLLLICRVAEWDAACVDMQCARPVSEQIVVECPVQRLACEADGFVRGLQLAVPAGPLF
ALFGGERIPFGFRLAAVRGAGTSEAVGVRISCASMTFTGHMGAFRTQFPVHEQSRIRTVWHAACVHPVDLVADFEARVLD
RAGEPMICAAGGKRGHVPSRLQDAQNVLPQDYVECDARRIEAQVHETDLVRRVGDRFGGASPVF

Sequences:

>Translated_704_residues
MTTTADRREKGSGGITRLANGKYRAFVETTPDPGDGSRRRVSATGRTKSEALRKARDKALRPDMGMTPGGNATVAEWMDH
WVDEVIEPRRAPNTTKSYRTRIRMDITPVIGAVPLDRLRPSHVRMVENRILRGDGRTGTDPRSAATARLTHSILKTALGD
AMAEGLIDRNPAALTEVPETEPVEIAILTTGQAARLIALEPDTKWRLIWRLLFITGMRLGETLGITRQELIRSDGLPCLL
VEWQLKEFEKDTVIPAGYRARHLGGRMWLTRPKTRKGQRLIPLPADLAADLESYMDSAGIPDDQPVFRSGRGNPICKDTL
HHAWRRALDRAGLPHVIRIHLRRHATHVLDPARLQRGAAAGERLQHEPVRRRDQTHQPAHQFQRFHRRMEDPVHGQPLPR
SRLRTIPEHGIEAGCAAGIIVFRTRMGHAPAVTGFRACAWFAFSTDGDAGLSVEFLGRGLVEQHVRRETGFGRVVGAIRF
VRAVDVVVARAGVEVGMPVLVLRLLLICRVAEWDAACVDMQCARPVSEQIVVECPVQRLACEADGFVRGLQLAVPAGPLF
ALFGGERIPFGFRLAAVRGAGTSEAVGVRISCASMTFTGHMGAFRTQFPVHEQSRIRTVWHAACVHPVDLVADFEARVLD
RAGEPMICAAGGKRGHVPSRLQDAQNVLPQDYVECDARRIEAQVHETDLVRRVGDRFGGASPVF
>Mature_703_residues
TTTADRREKGSGGITRLANGKYRAFVETTPDPGDGSRRRVSATGRTKSEALRKARDKALRPDMGMTPGGNATVAEWMDHW
VDEVIEPRRAPNTTKSYRTRIRMDITPVIGAVPLDRLRPSHVRMVENRILRGDGRTGTDPRSAATARLTHSILKTALGDA
MAEGLIDRNPAALTEVPETEPVEIAILTTGQAARLIALEPDTKWRLIWRLLFITGMRLGETLGITRQELIRSDGLPCLLV
EWQLKEFEKDTVIPAGYRARHLGGRMWLTRPKTRKGQRLIPLPADLAADLESYMDSAGIPDDQPVFRSGRGNPICKDTLH
HAWRRALDRAGLPHVIRIHLRRHATHVLDPARLQRGAAAGERLQHEPVRRRDQTHQPAHQFQRFHRRMEDPVHGQPLPRS
RLRTIPEHGIEAGCAAGIIVFRTRMGHAPAVTGFRACAWFAFSTDGDAGLSVEFLGRGLVEQHVRRETGFGRVVGAIRFV
RAVDVVVARAGVEVGMPVLVLRLLLICRVAEWDAACVDMQCARPVSEQIVVECPVQRLACEADGFVRGLQLAVPAGPLFA
LFGGERIPFGFRLAAVRGAGTSEAVGVRISCASMTFTGHMGAFRTQFPVHEQSRIRTVWHAACVHPVDLVADFEARVLDR
AGEPMICAAGGKRGHVPSRLQDAQNVLPQDYVECDARRIEAQVHETDLVRRVGDRFGGASPVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77857; Mature: 77725

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTADRREKGSGGITRLANGKYRAFVETTPDPGDGSRRRVSATGRTKSEALRKARDKAL
CCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHC
RPDMGMTPGGNATVAEWMDHWVDEVIEPRRAPNTTKSYRTRIRMDITPVIGAVPLDRLRP
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEEECHHHCCCCHHHCCH
SHVRMVENRILRGDGRTGTDPRSAATARLTHSILKTALGDAMAEGLIDRNPAALTEVPET
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCC
EPVEIAILTTGQAARLIALEPDTKWRLIWRLLFITGMRLGETLGITRQELIRSDGLPCLL
CCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEE
VEWQLKEFEKDTVIPAGYRARHLGGRMWLTRPKTRKGQRLIPLPADLAADLESYMDSAGI
EEHHHHHCCCCCCCCCCCHHHHCCCEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHCCC
PDDQPVFRSGRGNPICKDTLHHAWRRALDRAGLPHVIRIHLRRHATHVLDPARLQRGAAA
CCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
GERLQHEPVRRRDQTHQPAHQFQRFHRRMEDPVHGQPLPRSRLRTIPEHGIEAGCAAGII
HHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCHHHCCCHHHHHHHH
VFRTRMGHAPAVTGFRACAWFAFSTDGDAGLSVEFLGRGLVEQHVRRETGFGRVVGAIRF
HHHHHCCCCCCHHHHHHHEEEEEECCCCCCCCHHHHHCHHHHHHHHHHCCHHHHHHHHHH
VRAVDVVVARAGVEVGMPVLVLRLLLICRVAEWDAACVDMQCARPVSEQIVVECPVQRLA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHCHHHCCCCCHHHEEECCHHHHH
CEADGFVRGLQLAVPAGPLFALFGGERIPFGFRLAAVRGAGTSEAVGVRISCASMTFTGH
HCCCHHHHHEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEECC
MGAFRTQFPVHEQSRIRTVWHAACVHPVDLVADFEARVLDRAGEPMICAAGGKRGHVPSR
CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH
LQDAQNVLPQDYVECDARRIEAQVHETDLVRRVGDRFGGASPVF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TTTADRREKGSGGITRLANGKYRAFVETTPDPGDGSRRRVSATGRTKSEALRKARDKAL
CCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHC
RPDMGMTPGGNATVAEWMDHWVDEVIEPRRAPNTTKSYRTRIRMDITPVIGAVPLDRLRP
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEEECHHHCCCCHHHCCH
SHVRMVENRILRGDGRTGTDPRSAATARLTHSILKTALGDAMAEGLIDRNPAALTEVPET
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCC
EPVEIAILTTGQAARLIALEPDTKWRLIWRLLFITGMRLGETLGITRQELIRSDGLPCLL
CCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEE
VEWQLKEFEKDTVIPAGYRARHLGGRMWLTRPKTRKGQRLIPLPADLAADLESYMDSAGI
EEHHHHHCCCCCCCCCCCHHHHCCCEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHCCC
PDDQPVFRSGRGNPICKDTLHHAWRRALDRAGLPHVIRIHLRRHATHVLDPARLQRGAAA
CCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
GERLQHEPVRRRDQTHQPAHQFQRFHRRMEDPVHGQPLPRSRLRTIPEHGIEAGCAAGII
HHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCHHHCCCHHHHHHHH
VFRTRMGHAPAVTGFRACAWFAFSTDGDAGLSVEFLGRGLVEQHVRRETGFGRVVGAIRF
HHHHHCCCCCCHHHHHHHEEEEEECCCCCCCCHHHHHCHHHHHHHHHHCCHHHHHHHHHH
VRAVDVVVARAGVEVGMPVLVLRLLLICRVAEWDAACVDMQCARPVSEQIVVECPVQRLA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHCHHHCCCCCHHHEEECCHHHHH
CEADGFVRGLQLAVPAGPLFALFGGERIPFGFRLAAVRGAGTSEAVGVRISCASMTFTGH
HCCCHHHHHEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEECC
MGAFRTQFPVHEQSRIRTVWHAACVHPVDLVADFEARVLDRAGEPMICAAGGKRGHVPSR
CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH
LQDAQNVLPQDYVECDARRIEAQVHETDLVRRVGDRFGGASPVF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA