Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692187

Identifier: 213692187

GI number: 213692187

Start: 1491875

End: 1492273

Strand: Direct

Name: 213692187

Synonym: Blon_1307

Alternate gene names: NA

Gene position: 1491875-1492273 (Clockwise)

Preceding gene: 213692186

Following gene: 213692188

Centisome position: 52.67

GC content: 54.39

Gene sequence:

>399_bases
GTGAAATTGGAATCAAATCATCATTCGGTGTTCCTCATGCACTACCACCTCGTGCTCGTCGTGAAATACCGGCGAAAAGT
ATTCGACGACGAAATCTCCGCCCGTGCGCGGGAAATCTTCGAGTACATCGCGCCCAAGTACGGGATAACCGTCGAGGAAT
GGAACCACGACCAAGATCATGTGCATATCCTGTTCCGCGCCCAGCCCAAGACGGAACTGTCGAAGTTCATCAACGCATAC
AAGAGCGCATCCAGCCGCCTGCTCAAACAGGAGTATCCGCGCATCCGTCAGAAACCCTGGAAGGAATATTTCTGGAGCCG
CAGCTTCTGCCTGCTCACCACAAGAGGCGCGCCCATCGAGGTGATACGCCGGTACATCGAGAGTCAGGGACGCAAATGA

Upstream 100 bases:

>100_bases
CTCCCGCCTCTTAGCGGAGCGTAGGCGGGAGAATCCTCAGCGTCTCTTCTTGTGCTATCACCTCGATTCAGTCGTGCATT
ACTGAATCGAGGTGATAGCA

Downstream 100 bases:

>100_bases
ACACGACGACAATCACACGACGTAGGGCGATCAGGTTCGCCTACCCCACCAAGGGGCAGGCGAACCTGATCGACCGCACC
ATCGGCTGCGCGCGCCTCGT

Product: transposase IS200-family protein

Products: NA

Alternate protein names: Transposase IS; IS Element Transposase; Transposase -Family Protein; Transposase-Related Protein; Transposase And Inactivated Derivatives; ISSoc3 OrfA Transposase; Transposase Family Protein; Transposase TnA; Transposase OrfA; LOW QUALITY PROTEIN Transposase; Transposase Related Protein; Transposition Helper Protein; IS Element ISTsi3 OrfA-Like Probably Transposase; ISChy9 Transposase OrfA; ISCpe2 Transposase OrfA; ISSoc10 OrfA Transposase; Transposase Repeat Family IS; Transposase ORF A; Transposase OrfA For Insertion Sequence Element; Transposase-Family Protein

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MKLESNHHSVFLMHYHLVLVVKYRRKVFDDEISARAREIFEYIAPKYGITVEEWNHDQDHVHILFRAQPKTELSKFINAY
KSASSRLLKQEYPRIRQKPWKEYFWSRSFCLLTTRGAPIEVIRRYIESQGRK

Sequences:

>Translated_132_residues
MKLESNHHSVFLMHYHLVLVVKYRRKVFDDEISARAREIFEYIAPKYGITVEEWNHDQDHVHILFRAQPKTELSKFINAY
KSASSRLLKQEYPRIRQKPWKEYFWSRSFCLLTTRGAPIEVIRRYIESQGRK
>Mature_132_residues
MKLESNHHSVFLMHYHLVLVVKYRRKVFDDEISARAREIFEYIAPKYGITVEEWNHDQDHVHILFRAQPKTELSKFINAY
KSASSRLLKQEYPRIRQKPWKEYFWSRSFCLLTTRGAPIEVIRRYIESQGRK

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16028; Mature: 16028

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLESNHHSVFLMHYHLVLVVKYRRKVFDDEISARAREIFEYIAPKYGITVEEWNHDQDH
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE
VHILFRAQPKTELSKFINAYKSASSRLLKQEYPRIRQKPWKEYFWSRSFCLLTTRGAPIE
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEECCCCHH
VIRRYIESQGRK
HHHHHHHHCCCC
>Mature Secondary Structure
MKLESNHHSVFLMHYHLVLVVKYRRKVFDDEISARAREIFEYIAPKYGITVEEWNHDQDH
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE
VHILFRAQPKTELSKFINAYKSASSRLLKQEYPRIRQKPWKEYFWSRSFCLLTTRGAPIE
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEECCCCHH
VIRRYIESQGRK
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA